-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_1430713-1676931

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.83988_t
Couldn't classify 198498, 198520
Sorry, prediction pasa_asmbl_28363.p1 fails validation.
(ATG)	 AT	196800-196806	GT	TGG
(GAA)	 AG	197303-197410	GT	AGG
(GCA)	 AG	197574-197669	GT	CAG
(AGA)	 AG	197825-197950	GT	TGG
(AGT)	 AG	198498-198520	AT	GCA
-recovered pasa_asmbl_28363.p1, initial, 196800, 196806
-recovered pasa_asmbl_28363.p1, internal, 197303, 197410
-recovered pasa_asmbl_28363.p1, internal, 197574, 197669
-recovered pasa_asmbl_28363.p1, internal, 197825, 197950
Valid prediction for GlimmerHMM_glimmerT_48305-T1
Valid prediction for snap_scaffold_21-snap.287-T1
Valid prediction for snap_scaffold_21-snap.296-T1
Valid prediction for GlimmerHMM_glimmerT_48304-T1
Valid prediction for GeneMark_model.83971_t
Valid prediction for GeneMark_model.83963_t
Valid prediction for snap_scaffold_21-snap.282-T1
Valid prediction for GeneMark_model.83965_t
Valid prediction for GlimmerHMM_glimmerT_48309-T1
Valid prediction for GeneMark_model.83986_t
Valid prediction for snap_scaffold_21-snap.301-T1
Valid prediction for GeneMark_model.83947_t
Valid prediction for pasa_asmbl_28368.p1
Valid prediction for GeneMark_model.83996_t
Valid prediction for GlimmerHMM_glimmerT_48307-T1
Valid prediction for GeneMark_model.83939_t
Valid prediction for GeneMark_model.83973_t
Valid prediction for GlimmerHMM_glimmerT_48319-T1
Valid prediction for GlimmerHMM_glimmerT_48296-T1
Valid prediction for GlimmerHMM_glimmerT_48297-T1
Valid prediction for snap_scaffold_21-snap.262-T1
Valid prediction for GlimmerHMM_glimmerT_48316-T1
Valid prediction for Augustus_model.g32304.t1
Valid prediction for GeneMark_model.83975_t
Valid prediction for GeneMark_model.83930_t
Valid prediction for snap_scaffold_21-snap.274-T1
Valid prediction for GeneMark_model.83969_t
Valid prediction for GeneMark_model.83953_t
Valid prediction for GeneMark_model.83992_t
Valid prediction for GeneMark_model.83995_t
Valid prediction for GeneMark_model.83945_t
Valid prediction for GeneMark_model.83941_t
Valid prediction for GeneMark_model.83955_t
Valid prediction for snap_scaffold_21-snap.255-T1
Valid prediction for Augustus_model.g32306.t1
Valid prediction for Augustus_model.g32299.t1
Valid prediction for snap_scaffold_21-snap.280-T1
Valid prediction for snap_scaffold_21-snap.269-T1
Valid prediction for snap_scaffold_21-snap.290-T1
Valid prediction for GeneMark_model.83967_t
Valid prediction for snap_scaffold_21-snap.286-T1
Valid prediction for snap_scaffold_21-snap.275-T1
Valid prediction for snap_scaffold_21-snap.303-T1
Valid prediction for snap_scaffold_21-snap.272-T1
Valid prediction for HiQ_model.g32300.t1
Valid prediction for GlimmerHMM_glimmerT_48290-T1
Valid prediction for Augustus_model.g32302.t1
Valid prediction for GlimmerHMM_glimmerT_48318-T1
Valid prediction for GeneMark_model.83932_t
Valid prediction for GeneMark_model.83982_t
Valid prediction for Augustus_model.g32303.t1
Valid prediction for snap_scaffold_21-snap.293-T1
Valid prediction for GlimmerHMM_glimmerT_48303-T1
Valid prediction for GeneMark_model.83957_t
Valid prediction for GeneMark_model.83950_t
Valid prediction for snap_scaffold_21-snap.267-T1
Valid prediction for snap_scaffold_21-snap.302-T1
Valid prediction for GlimmerHMM_glimmerT_48313-T1
Valid prediction for HiQ_model.g32308.t1
Couldn't classify 198970, 198993
Sorry, prediction pasa_asmbl_28365.p1 fails validation.
(GTG)	 GG	198970-198993	GT	TGG
(GAA)	 AG	199698-199759	GT	AGG
(GCG)	 AG	200943-201022	GT	TGG
(GTC)	 AG	201446-201557	GT	AGG
(TGC)	 AG	201899-202062	GT	AGG
(GGA)	 AG	202234-202329	GT	AGG
(TTG)	 AG	202462-202559	GT	CGG
(ACC)	 AG	202949-203069	GT	GGG
(GCG)	 AG	203196-203353	GT	AGG
(GCG)	 AG	203444-203558	GT	AGG
(ATC)	 AG	203748-203875	GT	TGG
(AAG)	 AG	203991-204158	GT	AGG
(GGG)	 AG	204395-204556	GT	ACG
(GTG)	 AG	204763-204807	CT	AAC
-recovered pasa_asmbl_28365.p1, terminal, 204763, 204807
-recovered pasa_asmbl_28365.p1, internal, 199698, 199759
-recovered pasa_asmbl_28365.p1, internal, 200943, 201022
-recovered pasa_asmbl_28365.p1, internal, 201446, 201557
-recovered pasa_asmbl_28365.p1, internal, 201899, 202062
-recovered pasa_asmbl_28365.p1, internal, 202234, 202329
-recovered pasa_asmbl_28365.p1, internal, 202462, 202559
-recovered pasa_asmbl_28365.p1, internal, 202949, 203069
-recovered pasa_asmbl_28365.p1, internal, 203196, 203353
-recovered pasa_asmbl_28365.p1, internal, 203444, 203558
-recovered pasa_asmbl_28365.p1, internal, 203748, 203875
-recovered pasa_asmbl_28365.p1, internal, 203991, 204158
-recovered pasa_asmbl_28365.p1, internal, 204395, 204556
Valid prediction for GeneMark_model.83928_t
Valid prediction for GlimmerHMM_glimmerT_48312-T1
Valid prediction for snap_scaffold_21-snap.291-T1
Valid prediction for GlimmerHMM_glimmerT_48300-T1
Valid prediction for HiQ_model.g32311.t1
Valid prediction for snap_scaffold_21-snap.278-T1
Valid prediction for GeneMark_model.83958_t
Valid prediction for snap_scaffold_21-snap.295-T1
Valid prediction for snap_scaffold_21-snap.292-T1
Valid prediction for Augustus_model.g32312.t1
Valid prediction for snap_scaffold_21-snap.283-T1
Valid prediction for snap_scaffold_21-snap.305-T1
Valid prediction for GlimmerHMM_glimmerT_48294-T1
Valid prediction for GlimmerHMM_glimmerT_48310-T1
Valid prediction for snap_scaffold_21-snap.288-T1
Valid prediction for snap_scaffold_21-snap.300-T1
Valid prediction for GeneMark_model.83985_t
Valid prediction for GeneMark_model.83949_t
Valid prediction for GeneMark_model.83943_t
Valid prediction for snap_scaffold_21-snap.260-T1
Valid prediction for GeneMark_model.83993_t
Valid prediction for GeneMark_model.83961_t
Valid prediction for GeneMark_model.83946_t
Valid prediction for GlimmerHMM_glimmerT_48302-T1
Valid prediction for CodingQuarry_transcript_32390-T1
Valid prediction for snap_scaffold_21-snap.268-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_21-snap.271-T1
Valid prediction for snap_scaffold_21-snap.279-T1
Valid prediction for GeneMark_model.83990_t
Valid prediction for GlimmerHMM_glimmerT_48298-T1
Valid prediction for GeneMark_model.83972_t
Valid prediction for Augustus_model.g32309.t1
Valid prediction for GeneMark_model.83974_t
Valid prediction for GeneMark_model.83991_t
Valid prediction for GeneMark_model.83960_t
Valid prediction for GeneMark_model.83980_t
Valid prediction for GeneMark_model.83931_t
Valid prediction for GeneMark_model.83970_t
Valid prediction for GeneMark_model.83997_t
Valid prediction for GeneMark_model.83940_t
Valid prediction for GeneMark_model.83929_t
Valid prediction for GlimmerHMM_glimmerT_48311-T1
Valid prediction for Augustus_model.g32313.t1
Valid prediction for GlimmerHMM_glimmerT_48320-T1
Valid prediction for GeneMark_model.83984_t
Valid prediction for snap_scaffold_21-snap.259-T1
Valid prediction for GeneMark_model.83938_t
Valid prediction for GlimmerHMM_glimmerT_48291-T1
Valid prediction for GeneMark_model.83936_t
Valid prediction for GeneMark_model.83989_t
Valid prediction for GlimmerHMM_glimmerT_48299-T1
Valid prediction for snap_scaffold_21-snap.299-T1
Valid prediction for GlimmerHMM_glimmerT_48301-T1
Valid prediction for GlimmerHMM_glimmerT_48317-T1
Valid prediction for Augustus_model.g32310.t1
Valid prediction for snap_scaffold_21-snap.297-T1
Valid prediction for snap_scaffold_21-snap.285-T1
Valid prediction for GeneMark_model.83954_t
Valid prediction for Augustus_model.g32305.t1
Valid prediction for GeneMark_model.83948_t
Valid prediction for GeneMark_model.83944_t
Valid prediction for GeneMark_model.83977_t
Valid prediction for snap_scaffold_21-snap.294-T1
Valid prediction for GeneMark_model.83959_t
Valid prediction for GeneMark_model.83942_t
Valid prediction for GeneMark_model.83935_t
Valid prediction for GlimmerHMM_glimmerT_48315-T1
Valid prediction for GeneMark_model.83987_t
Valid prediction for snap_scaffold_21-snap.276-T1
Valid prediction for GeneMark_model.83966_t
Valid prediction for GlimmerHMM_glimmerT_48295-T1
Valid prediction for GeneMark_model.83979_t
Valid prediction for snap_scaffold_21-snap.263-T1
Valid prediction for GeneMark_model.83968_t
Valid prediction for GeneMark_model.83927_t
Valid prediction for GlimmerHMM_glimmerT_48308-T1
Valid prediction for snap_scaffold_21-snap.261-T1
Valid prediction for Augustus_model.g32307.t1
Valid prediction for snap_scaffold_21-snap.289-T1
Valid prediction for snap_scaffold_21-snap.258-T1
Valid prediction for GeneMark_model.83978_t
Valid prediction for snap_scaffold_21-snap.277-T1
Valid prediction for Augustus_model.g32301.t1
Valid prediction for GlimmerHMM_glimmerT_48314-T1
Valid prediction for snap_scaffold_21-snap.270-T1
Valid prediction for GeneMark_model.83951_t
Valid prediction for snap_scaffold_21-snap.264-T1
Valid prediction for GeneMark_model.83934_t
Valid prediction for GeneMark_model.83981_t
Valid prediction for snap_scaffold_21-snap.256-T1
Valid prediction for snap_scaffold_21-snap.304-T1
Valid prediction for GlimmerHMM_glimmerT_48293-T1
Valid prediction for GeneMark_model.83983_t
Valid prediction for snap_scaffold_21-snap.273-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_48306-T1
Valid prediction for snap_scaffold_21-snap.284-T1
Valid prediction for snap_scaffold_21-snap.281-T1
Valid prediction for GeneMark_model.83994_t
Valid prediction for snap_scaffold_21-snap.266-T1
Valid prediction for GeneMark_model.83962_t
Valid prediction for snap_scaffold_21-snap.257-T1
Valid prediction for GeneMark_model.83952_t
Valid prediction for snap_scaffold_21-snap.298-T1
Valid prediction for GlimmerHMM_glimmerT_48292-T1
Valid prediction for GeneMark_model.83976_t
Valid prediction for GeneMark_model.83933_t
Valid prediction for snap_scaffold_21-snap.265-T1
Valid prediction for Augustus_model.g32298.t1
Valid prediction for GeneMark_model.83937_t
Valid prediction for GeneMark_model.83956_t
Valid prediction for GeneMark_model.83964_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 125345, rend_intergenic: 125342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18690, rend_intergenic: 2317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27162, rend_intergenic: 18961  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36351, rend_intergenic: 30649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50964, rend_intergenic: 37551  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69862, rend_intergenic: 54336  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84609, rend_intergenic: 81114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94111, rend_intergenic: 89296  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97827, rend_intergenic: 95057  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102321, rend_intergenic: 98731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105419, rend_intergenic: 104786  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105855, rend_intergenic: 105794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111778, rend_intergenic: 105966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112875, rend_intergenic: 112636  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125139, rend_intergenic: 112983  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136616, rend_intergenic: 126422  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150701, rend_intergenic: 136797  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162875, rend_intergenic: 158161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241045, rend_intergenic: 237804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 246219
-exon list size: 1021


building trellis

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50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 57 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 125345, rend_intergenic: 125342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18690, rend_intergenic: 2317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27162, rend_intergenic: 18961  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36351, rend_intergenic: 30649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50964, rend_intergenic: 37551  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69862, rend_intergenic: 54336  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84609, rend_intergenic: 81114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94111, rend_intergenic: 89296  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97827, rend_intergenic: 95057  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102321, rend_intergenic: 98731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105419, rend_intergenic: 104786  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105855, rend_intergenic: 105794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111778, rend_intergenic: 105966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112875, rend_intergenic: 112636  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125139, rend_intergenic: 112983  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136616, rend_intergenic: 126422  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150701, rend_intergenic: 136797  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162875, rend_intergenic: 158161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241045, rend_intergenic: 237804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support