-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_10767248-11046150

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g33413.t1
Valid prediction for GlimmerHMM_glimmerT_49792-T1
Valid prediction for snap_scaffold_21-snap.2386-T1
Valid prediction for snap_scaffold_21-snap.2370-T1
Valid prediction for GlimmerHMM_glimmerT_49795-T1
Valid prediction for Augustus_model.g33409.t1
Valid prediction for snap_scaffold_21-snap.2377-T1
Valid prediction for GlimmerHMM_glimmerT_49800-T1
Valid prediction for GlimmerHMM_glimmerT_49797-T1
Couldn't classify 167386, 167539
Couldn't classify 168390, 168538
Sorry, prediction pasa_asmbl_28904.p1 fails validation.
(AGG)	 AA	167386-167539	GT	AGG
(GGA)	 AG	168390-168538	TT	CAT
Valid prediction for Augustus_model.g33418.t1
Valid prediction for GeneMark_model.86248_t
Valid prediction for snap_scaffold_21-snap.2372-T1
Valid prediction for GlimmerHMM_glimmerT_49805-T1
Valid prediction for GeneMark_model.86256_t
Valid prediction for Augustus_model.g33416.t1
Valid prediction for GeneMark_model.86266_t
Valid prediction for Augustus_model.g33425.t1
Valid prediction for Augustus_model.g33419.t1
Couldn't classify 208782, 208854
Sorry, prediction pasa_asmbl_28917.p1 fails validation.
(GAA)	 CA	208782-208854	GT	AGG
(CCT)	 AG	209653-209734	GT	AGG
(GAG)	 AG	211978-212041	GT	AGG
(AGC)	 AG	212173-213452	GT	AGG
(GAA)	 AG	214202-214375	GT	TGG
(GTC)	 AG	215202-215361	GT	AGG
(GTT)	 AG	215662-215860	GT	GTG
(ACG)	 AG	216389-216599	GT	AGG
(GCT)	 AG	216853-216967	GT	AGG
(ATC)	 AG	217274-217495	GT	AGG
(GTG)	 AG	218171-218388	GT	AGG
(GAG)	 AG	218678-218854	GT	AGG
(GGG)	 AG	219033-219144	AA	GAA
-recovered pasa_asmbl_28917.p1, terminal, 219033, 219144
-recovered pasa_asmbl_28917.p1, internal, 209653, 209734
-recovered pasa_asmbl_28917.p1, internal, 211978, 212041
-recovered pasa_asmbl_28917.p1, internal, 212173, 213452
-recovered pasa_asmbl_28917.p1, internal, 214202, 214375
-recovered pasa_asmbl_28917.p1, internal, 215202, 215361
-recovered pasa_asmbl_28917.p1, internal, 215662, 215860
-recovered pasa_asmbl_28917.p1, internal, 216389, 216599
-recovered pasa_asmbl_28917.p1, internal, 216853, 216967
-recovered pasa_asmbl_28917.p1, internal, 217274, 217495
-recovered pasa_asmbl_28917.p1, internal, 218171, 218388
-recovered pasa_asmbl_28917.p1, internal, 218678, 218854
Valid prediction for snap_scaffold_21-snap.2373-T1
Valid prediction for pasa_asmbl_28977.p1
Valid prediction for GeneMark_model.86273_t
Valid prediction for CodingQuarry_transcript_32676-T1
Valid prediction for Augustus_model.g33414.t1
Valid prediction for HiQ_model.g33423.t1
Valid prediction for GeneMark_model.86263_t
Couldn't classify 122638, 122730
Sorry, prediction pasa_asmbl_28901.p1 fails validation.
(GCG)	 AG	122638-122730	GT	AGG
(GCG)	 AG	123523-123753	GT	TGG
(GCA)	 AG	123833-123997	CC	AGC
-recovered pasa_asmbl_28901.p1, terminal, 123833, 123997
-recovered pasa_asmbl_28901.p1, internal, 122638, 122730
-recovered pasa_asmbl_28901.p1, internal, 123523, 123753
Valid prediction for HiQ_model.g33422.t1
Valid prediction for GlimmerHMM_glimmerT_49793-T1
Valid prediction for GeneMark_model.86275_t
Valid prediction for snap_scaffold_21-snap.2359-T1
Sorry, intron length (6) is less than minimum required (10)
Couldn't classify 196616, 196657
Sorry, prediction pasa_asmbl_28908.p1 fails validation.
(GCC)	 AG	196616-196657	GT	TGG
(TTT)	 AG	197343-197471	GT	TTG
(TTG)	 AG	197571-197649	GT	CTG
(GGG)	 AG	197841-197883	GT	CTG
(AAT)	 AG	198000-198125	GT	ATG
(ATC)	 AG	198281-198438	GT	TGG
(CCT)	 AG	198814-198935	AA	AAA
-recovered pasa_asmbl_28908.p1, terminal, 198814, 198935
-recovered pasa_asmbl_28908.p1, internal, 196616, 196657
-recovered pasa_asmbl_28908.p1, internal, 197343, 197471
-recovered pasa_asmbl_28908.p1, internal, 197571, 197649
-recovered pasa_asmbl_28908.p1, internal, 197841, 197883
-recovered pasa_asmbl_28908.p1, internal, 198000, 198125
-recovered pasa_asmbl_28908.p1, internal, 198281, 198438
Valid prediction for snap_scaffold_21-snap.2384-T1
Couldn't classify 172579, 172858
Sorry, prediction pasa_asmbl_28905.p1 fails validation.
(GCT)	 CA	172579-172858	GT	AGG
(GGT)	 AG	173095-173239	GT	GAG
(CCA)	 AG	174076-174206	GT	CAG
(TTC)	 AG	174602-174753	GT	CGG
(ACC)	 AG	174928-175086	TG	AGT
-recovered pasa_asmbl_28905.p1, terminal, 173095, 173239
-recovered pasa_asmbl_28905.p1, terminal, 174928, 175086
-recovered pasa_asmbl_28905.p1, internal, 173095, 173239
-recovered pasa_asmbl_28905.p1, internal, 174076, 174206
-recovered pasa_asmbl_28905.p1, internal, 174602, 174753
Valid prediction for Augustus_model.g33410.t1
Valid prediction for GeneMark_model.86279_t
Valid prediction for CodingQuarry_transcript_32672-T1
Valid prediction for snap_scaffold_21-snap.2380-T1
Valid prediction for GeneMark_model.86280_t
Valid prediction for GlimmerHMM_glimmerT_49811-T1
Valid prediction for GeneMark_model.86243_t
Couldn't classify 162392, 163789
Sorry, prediction pasa_asmbl_28903.p1 fails validation.
(ATG)	 AT	162392-163789	TA	GGT
Valid prediction for GlimmerHMM_glimmerT_49799-T1
Valid prediction for Augustus_model.g33403.t1
Valid prediction for GlimmerHMM_glimmerT_49810-T1
Valid prediction for GlimmerHMM_glimmerT_49788-T1
Valid prediction for GeneMark_model.86268_t
Couldn't classify 53012, 53237
Sorry, prediction pasa_asmbl_28894.p1 fails validation.
(CCC)	 CC	53012-53237	GT	AGG
(CAC)	 AG	53537-53624	GT	GGG
(AAC)	 AG	53764-53833	GT	TAG
(GAA)	 AG	54038-54157	GT	AGG
(AAG)	 AG	55319-55435	AA	GAA
-recovered pasa_asmbl_28894.p1, terminal, 55319, 55435
-recovered pasa_asmbl_28894.p1, internal, 53537, 53624
-recovered pasa_asmbl_28894.p1, internal, 53764, 53833
-recovered pasa_asmbl_28894.p1, internal, 54038, 54157
Valid prediction for GlimmerHMM_glimmerT_49803-T1
Valid prediction for GeneMark_model.86281_t
Valid prediction for snap_scaffold_21-snap.2356-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.86271_t
Valid prediction for GeneMark_model.86252_t
Valid prediction for snap_scaffold_21-snap.2375-T1
Valid prediction for Augustus_model.g33405.t1
Valid prediction for snap_scaffold_21-snap.2357-T1
Valid prediction for GeneMark_model.86259_t
Valid prediction for GeneMark_model.86250_t
Valid prediction for CodingQuarry_transcript_32678-T1
Valid prediction for GeneMark_model.86260_t
Valid prediction for HiQ_model.g33420.t1
Valid prediction for GlimmerHMM_glimmerT_49812-T1
Couldn't classify 118370, 118502
Couldn't classify 119625, 119702
Sorry, prediction pasa_asmbl_29009.p1 fails validation.
(AGA)	 TT	118370-118502	GT	AGG
(AGC)	 AG	119003-119163	GT	TGG
(GCG)	 AG	119625-119702	CG	CGC
-recovered pasa_asmbl_29009.p1, internal, 119003, 119163
Valid prediction for snap_scaffold_21-snap.2388-T1
Valid prediction for GlimmerHMM_glimmerT_49809-T1
Valid prediction for GeneMark_model.86246_t
Valid prediction for snap_scaffold_21-snap.2378-T1
Valid prediction for snap_scaffold_21-snap.2368-T1
Valid prediction for GeneMark_model.86270_t
Couldn't classify 116072, 116081
Sorry, prediction pasa_asmbl_28900.p1 fails validation.
(ATG)	 CG	111934-111996	GT	AGG
(GTG)	 AG	113919-114014	GT	AGG
(GTG)	 AG	114128-114250	GT	AGG
(GTG)	 AG	114641-114792	GT	AGG
(AGT)	 AG	115145-115228	GT	AGG
(AGA)	 AG	115699-115845	GT	AAG
(AAT)	 AG	116072-116081	TA	CTT
-recovered pasa_asmbl_28900.p1, initial, 111934, 111996
-recovered pasa_asmbl_28900.p1, internal, 113919, 114014
-recovered pasa_asmbl_28900.p1, internal, 114128, 114250
-recovered pasa_asmbl_28900.p1, internal, 114641, 114792
-recovered pasa_asmbl_28900.p1, internal, 115145, 115228
-recovered pasa_asmbl_28900.p1, internal, 115699, 115845
Valid prediction for snap_scaffold_21-snap.2361-T1
Valid prediction for Augustus_model.g33412.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for pasa_asmbl_28102.p1
Valid prediction for snap_scaffold_21-snap.2366-T1
Valid prediction for HiQ_model.g33404.t1
Valid prediction for snap_scaffold_21-snap.2385-T1
Valid prediction for GeneMark_model.86278_t
Valid prediction for GeneMark_model.86251_t
Valid prediction for GlimmerHMM_glimmerT_49790-T1
Valid prediction for GlimmerHMM_glimmerT_49806-T1
Valid prediction for GeneMark_model.86282_t
Valid prediction for GlimmerHMM_glimmerT_49798-T1
Valid prediction for snap_scaffold_21-snap.2379-T1
Valid prediction for GeneMark_model.86269_t
Valid prediction for Augustus_model.g33408.t1
Valid prediction for GlimmerHMM_glimmerT_49804-T1
Valid prediction for Augustus_model.g33407.t1
Valid prediction for GeneMark_model.86277_t
Valid prediction for GlimmerHMM_glimmerT_49791-T1
Valid prediction for GlimmerHMM_glimmerT_49786-T1
Valid prediction for snap_scaffold_21-snap.2358-T1
Valid prediction for GlimmerHMM_glimmerT_49807-T1
Valid prediction for snap_scaffold_21-snap.2362-T1
Valid prediction for GeneMark_model.86245_t
Valid prediction for GeneMark_model.86244_t
Valid prediction for pasa_asmbl_28113.p1
Valid prediction for snap_scaffold_21-snap.2365-T1
Valid prediction for GlimmerHMM_glimmerT_49796-T1
Valid prediction for Augustus_model.g33415.t1
Valid prediction for snap_scaffold_21-snap.2371-T1
Valid prediction for snap_scaffold_21-snap.2381-T1
Valid prediction for GlimmerHMM_glimmerT_49787-T1
Valid prediction for snap_scaffold_21-snap.2382-T1
Valid prediction for CodingQuarry_transcript_32671-T1
Valid prediction for GlimmerHMM_glimmerT_49789-T1
Valid prediction for snap_scaffold_21-snap.2363-T1
Valid prediction for CodingQuarry_transcript_32677-T1
Valid prediction for GeneMark_model.86265_t
Valid prediction for HiQ_model.g33421.t1
Valid prediction for GlimmerHMM_glimmerT_49794-T1
Valid prediction for CodingQuarry_transcript_32674-T1
Valid prediction for GeneMark_model.86242_t
Valid prediction for snap_scaffold_21-snap.2389-T1
Valid prediction for snap_scaffold_21-snap.2364-T1
Valid prediction for HiQ_model.g33411.t1
Valid prediction for GlimmerHMM_glimmerT_49802-T1
Valid prediction for GlimmerHMM_glimmerT_49801-T1
Valid prediction for GeneMark_model.86262_t
Couldn't classify 243467, 243628
Sorry, prediction pasa_asmbl_28100.p1 fails validation.
(ATG)	 CA	232911-232967	GT	AGG
(GAA)	 AG	233788-233880	GT	GGG
(AAA)	 AG	234273-234439	GT	GAG
(TAA)	 AG	234737-234837	GT	CTG
(ATG)	 AG	234971-235071	GT	TGG
(GGC)	 AG	235258-235437	GT	GGG
(GCT)	 AG	235746-235901	GT	AAG
(TTG)	 AG	236105-236236	GT	ACG
(GAC)	 AG	236949-237017	GT	CGG
(GTT)	 AG	237232-237341	GT	TGG
(GTA)	 AG	237493-237719	GT	AGG
(GGT)	 AG	238195-238316	GT	AGG
(CAA)	 AG	238479-238631	GT	TGG
(GAC)	 AG	238836-238968	GT	AGG
(GGA)	 AG	239197-239345	GT	AGG
(ACG)	 AG	240402-240530	GT	AAG
(CTG)	 AG	240881-240991	GT	AGG
(GCT)	 AG	241218-241331	GT	AGG
(GCC)	 AG	242658-242780	GT	AGG
(GGC)	 AG	242923-243055	GT	TGG
(CCA)	 AG	243242-243360	GT	AGG
(ATC)	 AG	243467-243628	AA	GAA
-recovered pasa_asmbl_28100.p1, initial, 232911, 232967
add_exon() Sorry, pasa_asmbl_28100.p1 234971-235071-initial-1 is invalid.
-recovered pasa_asmbl_28100.p1, initial, 234971, 235071
-recovered pasa_asmbl_28100.p1, internal, 233788, 233880
-recovered pasa_asmbl_28100.p1, internal, 234273, 234439
-recovered pasa_asmbl_28100.p1, internal, 234737, 234837
-recovered pasa_asmbl_28100.p1, internal, 234971, 235071
-recovered pasa_asmbl_28100.p1, internal, 235258, 235437
-recovered pasa_asmbl_28100.p1, internal, 235746, 235901
-recovered pasa_asmbl_28100.p1, internal, 236105, 236236
-recovered pasa_asmbl_28100.p1, internal, 236949, 237017
-recovered pasa_asmbl_28100.p1, internal, 237232, 237341
-recovered pasa_asmbl_28100.p1, internal, 237493, 237719
-recovered pasa_asmbl_28100.p1, internal, 238195, 238316
-recovered pasa_asmbl_28100.p1, internal, 238479, 238631
-recovered pasa_asmbl_28100.p1, internal, 238836, 238968
-recovered pasa_asmbl_28100.p1, internal, 239197, 239345
-recovered pasa_asmbl_28100.p1, internal, 240402, 240530
-recovered pasa_asmbl_28100.p1, internal, 240881, 240991
-recovered pasa_asmbl_28100.p1, internal, 241218, 241331
-recovered pasa_asmbl_28100.p1, internal, 242658, 242780
-recovered pasa_asmbl_28100.p1, internal, 242923, 243055
-recovered pasa_asmbl_28100.p1, internal, 243242, 243360
Couldn't classify 97112, 97349
Couldn't classify 97533, 97627
Sorry, prediction pasa_asmbl_28112.p1 fails validation.
(CCC)	 AG	97112-97349	GT	CGG
(GTG)	 AG	97533-97627	GC	CAG
-recovered pasa_asmbl_28112.p1, internal, 97112, 97349
-recovered pasa_asmbl_28112.p1, internal, 97533, 97627
Valid prediction for GlimmerHMM_glimmerT_49808-T1
Valid prediction for snap_scaffold_21-snap.2369-T1
Valid prediction for GeneMark_model.86253_t
Valid prediction for GlimmerHMM_glimmerT_49784-T1
Valid prediction for GeneMark_model.86249_t
Valid prediction for snap_scaffold_21-snap.2360-T1
Valid prediction for snap_scaffold_21-snap.2374-T1
Couldn't classify 194200, 194246
Sorry, prediction pasa_asmbl_28105.p1 fails validation.
(TTA)	 CT	194200-194246	GT	AAG
(GTT)	 AG	194407-194533	GT	GAG
(CAG)	 AG	194792-195073	GT	AAG
-recovered pasa_asmbl_28105.p1, terminal, 194792, 195073
-recovered pasa_asmbl_28105.p1, internal, 194407, 194533
-recovered pasa_asmbl_28105.p1, internal, 194792, 195073
Valid prediction for snap_scaffold_21-snap.2367-T1
Valid prediction for snap_scaffold_21-snap.2376-T1
Valid prediction for snap_scaffold_21-snap.2383-T1
Valid prediction for Augustus_model.g33424.t1
Valid prediction for pasa_asmbl_28107.p1
Couldn't classify 127191, 127233
Couldn't classify 127832, 128109
Sorry, prediction pasa_asmbl_28110.p1 fails validation.
(TTG)	 TA	127191-127233	GT	AGG
(GAT)	 AG	127463-127564	GT	AGG
(GTT)	 AG	127832-128109	CC	AAC
-recovered pasa_asmbl_28110.p1, internal, 127463, 127564
Valid prediction for CodingQuarry_transcript_32675-T1
Valid prediction for GeneMark_model.86264_t
Couldn't classify 56524, 56602
Sorry, prediction pasa_asmbl_28181.p1 fails validation.
(AAC)	 GA	56524-56602	GT	AGG
(GAT)	 AG	56735-56947	GT	AGG
(GGA)	 AG	57593-57786	AC	AGA
-recovered pasa_asmbl_28181.p1, terminal, 57593, 57786
-recovered pasa_asmbl_28181.p1, internal, 56735, 56947
Valid prediction for Augustus_model.g33417.t1
Valid prediction for GeneMark_model.86247_t
Valid prediction for GlimmerHMM_glimmerT_49785-T1
Valid prediction for snap_scaffold_21-snap.2390-T1
Valid prediction for GeneMark_model.86258_t
Valid prediction for GeneMark_model.86276_t
Valid prediction for CodingQuarry_transcript_32673-T1
Valid prediction for snap_scaffold_21-snap.2387-T1
Valid prediction for GeneMark_model.86261_t
Valid prediction for GeneMark_model.86255_t
Couldn't classify 148897, 149670
Sorry, prediction pasa_asmbl_28109.p1 fails validation.
(TTC)	 TC	148897-149670	AC	AGA
Valid prediction for Augustus_model.g33406.t1
Valid prediction for GeneMark_model.86267_t
Valid prediction for GeneMark_model.86254_t
Valid prediction for GeneMark_model.86274_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 36533, rend_intergenic: 35812  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39736, rend_intergenic: 37108  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112646, rend_intergenic: 109921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115589, rend_intergenic: 113273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123997, rend_intergenic: 118368  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210774, rend_intergenic: 209729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231306, rend_intergenic: 229385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 278903
-exon list size: 591


building trellis

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37.6    
37.8    
37.9    
38.1    
38.3    
38.4    
38.6    
38.8    
39.0    
39.1    
39.3    
39.5    
39.6    
39.8    
40.0    
40.1    
40.3    
40.5    
40.6    
40.8    
41.0    
41.1    
41.3    
41.5    
41.7    
41.8    
42.0    
42.2    
42.3    
42.5    
42.7    
42.8    
43.0    
43.2    
43.3    
43.5    
43.7    
43.8    
44.0    
44.2    
44.4    
44.5    
44.7    
44.9    
45.0    
45.2    
45.4    
45.5    
45.7    
45.9    
46.0    
46.2    
46.4    
46.5    
46.7    
46.9    
47.0    
47.2    
47.4    
47.6    
47.7    
47.9    
48.1    
48.2    
48.4    
48.6    
48.7    
48.9    
49.1    
49.2    
49.4    
49.6    
49.7    
49.9    
50.1    
50.3    
50.4    
50.6    
50.8    
50.9    
51.1    
51.3    
51.4    
51.6    
51.8    
51.9    
52.1    
52.3    
52.4    
52.6    
52.8    
53.0    
53.1    
53.3    
53.5    
53.6    
53.8    
54.0    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.1    
55.3    
55.5    
55.6    
55.8    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.2    
57.3    
57.5    
57.7    
57.8    
58.0    
58.2    
58.3    
58.5    
58.7    
58.9    
59.0    
59.2    
59.4    
59.5    
59.7    
59.9    
60.0    
60.2    
60.4    
60.5    
60.7    
60.9    
61.0    
61.2    
61.4    
61.6    
61.7    
61.9    
62.1    
62.2    
62.4    
62.6    
62.7    
62.9    
63.1    
63.2    
63.4    
63.6    
63.7    
63.9    
64.1    
64.2    
64.4    
64.6    
64.8    
64.9    
65.1    
65.3    
65.4    
65.6    
65.8    
65.9    
66.1    
66.3    
66.4    
66.6    
66.8    
66.9    
67.1    
67.3    
67.5    
67.6    
67.8    
68.0    
68.1    
68.3    
68.5    
68.6    
68.8    
69.0    
69.1    
69.3    
69.5    
69.6    
69.8    
70.0    
70.2    
70.3    
70.5    
70.7    
70.8    
71.0    
71.2    
71.3    
71.5    
71.7    
71.8    
72.0    
72.2    
72.3    
72.5    
72.7    
72.8    
73.0    
73.2    
73.4    
73.5    
73.7    
73.9    
74.0    
74.2    
74.4    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.5    
75.7    
75.9    
76.1    
76.2    
76.4    
76.6    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.7    
77.9    
78.1    
78.2    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.4    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.8    
80.9    
81.1    
81.3    
81.5    
81.6    
81.8    
82.0    
82.1    
82.3    
82.5    
82.6    
82.8    
83.0    
83.1    
83.3    
83.5    
83.6    
83.8    
84.0    
84.1    
84.3    
84.5    
84.7    
84.8    
85.0    
85.2    
85.3    
85.5    
85.7    
85.8    
86.0    
86.2    
86.3    
86.5    
86.7    
86.8    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.0    
88.2    
88.4    
88.5    
88.7    
88.9    
89.0    
89.2    
89.4    
89.5    
89.7    
89.9    
90.1    
90.2    
90.4    
90.6    
90.7    
90.9    
91.1    
91.2    
91.4    
91.6    
91.7    
91.9    
92.1    
92.2    
92.4    
92.6    
92.7    
92.9    
93.1    
93.3    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.4    
94.6    
94.8    
94.9    
95.1    
95.3    
95.4    
95.6    
95.8    
96.0    
96.1    
96.3    
96.5    
96.6    
96.8    
97.0    
97.1    
97.3    
97.5    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 28 predictions from path traversal
Error with prediction: snap lend_intergenic: 36533, rend_intergenic: 35812  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39736, rend_intergenic: 37108  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112646, rend_intergenic: 109921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115589, rend_intergenic: 113273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123997, rend_intergenic: 118368  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210774, rend_intergenic: 209729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231306, rend_intergenic: 229385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support