-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2090

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 44, 103
Sorry, prediction GeneMark_model.110025_t fails validation.
(ACT)	 AG	44-103	GT	GAG
(TGT)	 AG	125-160	GT	GTG
(GAG)	 AG	186-229	GT	CCG
(ACA)	 AG	389-450	AC	GAA
-recovered GeneMark_model.110025_t, terminal, 389, 450
-recovered GeneMark_model.110025_t, internal, 44, 103
-recovered GeneMark_model.110025_t, internal, 125, 160
-recovered GeneMark_model.110025_t, internal, 186, 229
Couldn't classify 1458, 1575
Sorry, prediction GeneMark_model.110024_t fails validation.
(ATG)	 GG	1354-1382	GT	GAG
(AGG)	 AG	1458-1575	GT	CAG
-recovered GeneMark_model.110024_t, initial, 1354, 1382
-recovered GeneMark_model.110024_t, internal, 1458, 1575

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1594
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support