-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2086

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 794, 829
Couldn't classify 946, 1040
Sorry, prediction GeneMark_model.110022_t fails validation.
(ACC)	 AG	794-829	GT	AGG
(ACC)	 AG	866-905	GT	ATG
(GGC)	 AG	946-1040	GT	GTG
-recovered GeneMark_model.110022_t, internal, 794, 829
-recovered GeneMark_model.110022_t, internal, 866, 905
-recovered GeneMark_model.110022_t, internal, 946, 1040

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 420, 596
Sorry, prediction snap_scaffold_2086-snap.1-T1 fails validation.
(AAA)	 AG	420-596	GT	GGG
(GTC)	 AG	731-848	GA	GAG
-recovered snap_scaffold_2086-snap.1-T1, terminal, 731, 848
-recovered snap_scaffold_2086-snap.1-T1, internal, 420, 596

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1597
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support