-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2073

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 497, 567
Sorry, prediction GeneMark_model.110007_t fails validation.
(CCA)	 AG	497-567	GT	CCG
(TGA)	 AG	758-766	GT	GTG
(AGA)	 AG	812-826	GT	GGG
(AGA)	 AG	851-865	GT	GGG
(AGA)	 AG	890-908	AG	AGA
-recovered GeneMark_model.110007_t, terminal, 890, 908
-recovered GeneMark_model.110007_t, internal, 497, 567
-recovered GeneMark_model.110007_t, internal, 758, 766
-recovered GeneMark_model.110007_t, internal, 812, 826
-recovered GeneMark_model.110007_t, internal, 851, 865

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1609
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support