-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2067

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.110002_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1571, 1606
Sorry, prediction GeneMark_model.110001_t fails validation.
(ATG)	 GG	1009-1055	GT	GGG
(AGA)	 AG	1315-1326	GT	AGG
(AGA)	 AG	1351-1386	GT	AGG
(AAG)	 AG	1413-1430	GT	AGG
(CGA)	 AG	1463-1474	GT	AGG
(GTT)	 AG	1499-1546	GT	AGG
(GGA)	 AG	1571-1606	GT	AGG
-recovered GeneMark_model.110001_t, initial, 1009, 1055
-recovered GeneMark_model.110001_t, internal, 1315, 1326
-recovered GeneMark_model.110001_t, internal, 1351, 1386
-recovered GeneMark_model.110001_t, internal, 1413, 1430
-recovered GeneMark_model.110001_t, internal, 1463, 1474
-recovered GeneMark_model.110001_t, internal, 1499, 1546
-recovered GeneMark_model.110001_t, internal, 1571, 1606

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1615
-exon list size: 25


building trellis

3.7    
7.4    
11.1    
14.8    
18.5    
22.2    
25.9    
29.6    
33.3    
37.0    
40.7    
44.4    
48.1    
51.9    
55.6    
59.3    
63.0    
66.7    
70.4    
74.1    
77.8    
81.5    
85.2    
88.9    
92.6    
96.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support