-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2066

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.110000_t
Couldn't classify 585, 702
Couldn't classify 1226, 1348
Sorry, prediction snap_scaffold_2066-snap.1-T1 fails validation.
(GGA)	 AG	585-702	GT	TGG
(TTC)	 AG	1226-1348	GT	AAG
-recovered snap_scaffold_2066-snap.1-T1, internal, 585, 702
-recovered snap_scaffold_2066-snap.1-T1, internal, 1226, 1348

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g41940.t1
Valid prediction for GeneMark_model.109999_t
Valid prediction for GlimmerHMM_glimmerT_62960-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1615
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support