-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_20/scaffold_20_7700698-7890182

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 11504, 11524
Sorry, prediction pasa_asmbl_26288.p1 fails validation.
(ATG)	 GC	9202-9214	GT	GGG
(GCT)	 AG	10212-10313	GT	AGG
(GAA)	 AG	10817-10908	GT	GGG
(GCC)	 AG	11025-11093	GT	AGG
(TCT)	 AG	11504-11524	CT	ACC
-recovered pasa_asmbl_26288.p1, initial, 9202, 9214
-recovered pasa_asmbl_26288.p1, internal, 10212, 10313
-recovered pasa_asmbl_26288.p1, internal, 10817, 10908
-recovered pasa_asmbl_26288.p1, internal, 11025, 11093
Valid prediction for GeneMark_model.82951_t
Valid prediction for GeneMark_model.82968_t
Valid prediction for Augustus_model.g31681.t1
Valid prediction for HiQ_model.g31689.t1
Valid prediction for GlimmerHMM_glimmerT_47507-T1
Couldn't classify 14931, 14968
Sorry, prediction pasa_asmbl_25878.p1 fails validation.
(GTG)	 GA	14931-14968	GT	AGG
(GAA)	 AG	15330-15429	GT	GAG
(GAA)	 AG	16020-16142	GT	TGG
(TCA)	 AG	16630-16737	GT	AGG
(ATG)	 AG	17033-17132	GT	AGG
(ACG)	 AG	17285-17355	GT	AGG
(GTG)	 AG	17548-17638	GT	AGG
(ATC)	 AG	17787-17839	GT	CGG
(GAC)	 AG	17950-18056	GT	AGG
(CAT)	 AG	18444-18600	CA	GAC
-recovered pasa_asmbl_25878.p1, initial, 17033, 17132
-recovered pasa_asmbl_25878.p1, terminal, 18444, 18600
-recovered pasa_asmbl_25878.p1, internal, 15330, 15429
-recovered pasa_asmbl_25878.p1, internal, 16020, 16142
-recovered pasa_asmbl_25878.p1, internal, 16630, 16737
-recovered pasa_asmbl_25878.p1, internal, 17033, 17132
-recovered pasa_asmbl_25878.p1, internal, 17285, 17355
-recovered pasa_asmbl_25878.p1, internal, 17548, 17638
-recovered pasa_asmbl_25878.p1, internal, 17787, 17839
-recovered pasa_asmbl_25878.p1, internal, 17950, 18056
Valid prediction for CodingQuarry_transcript_30495-T1
Valid prediction for CodingQuarry_transcript_30500-T1
Couldn't classify 74844, 74933
Sorry, prediction pasa_asmbl_25881.p1 fails validation.
(CAG)	 AA	74844-74933	GT	AGG
(GTG)	 AG	75029-75160	GT	AGG
(CTC)	 AG	75412-75618	GT	AGG
(GAC)	 AG	76014-76151	GT	AGG
(GAG)	 AG	76288-76411	GT	GGG
(AAC)	 AG	76763-76934	GT	AGG
(GGG)	 AG	79558-79770	GT	AGG
(GAC)	 AG	79953-80097	GT	GGG
(TTC)	 AG	80410-80616	GT	AGG
(ACA)	 AG	80790-80894	GT	AGG
(GAG)	 AG	81066-81218	GT	AGG
(CTG)	 AG	81521-81769	GT	AGG
(ATG)	 AG	81970-82182	GT	GCG
(GTC)	 AG	82490-82702	GT	AGG
(GTG)	 AG	83038-83199	GT	AGG
(GCC)	 AG	83614-83742	GT	AGG
(GAC)	 AG	83857-83945	GT	AAG
(GTC)	 AG	84079-84202	GT	AGG
(GTG)	 AG	84410-84618	GT	AAG
(GGA)	 AG	85267-85375	GT	AGG
(ATG)	 AG	85618-85725	CG	GAC
-recovered pasa_asmbl_25881.p1, initial, 81970, 82182
add_exon() Sorry, pasa_asmbl_25881.p1 76763-76934-terminal-3 is invalid.
-recovered pasa_asmbl_25881.p1, terminal, 76763, 76934
-recovered pasa_asmbl_25881.p1, terminal, 85618, 85725
-recovered pasa_asmbl_25881.p1, internal, 75029, 75160
-recovered pasa_asmbl_25881.p1, internal, 75412, 75618
-recovered pasa_asmbl_25881.p1, internal, 76014, 76151
-recovered pasa_asmbl_25881.p1, internal, 76288, 76411
-recovered pasa_asmbl_25881.p1, internal, 76763, 76934
-recovered pasa_asmbl_25881.p1, internal, 79558, 79770
-recovered pasa_asmbl_25881.p1, internal, 79953, 80097
-recovered pasa_asmbl_25881.p1, internal, 80410, 80616
-recovered pasa_asmbl_25881.p1, internal, 80790, 80894
-recovered pasa_asmbl_25881.p1, internal, 81066, 81218
-recovered pasa_asmbl_25881.p1, internal, 81521, 81769
-recovered pasa_asmbl_25881.p1, internal, 81970, 82182
-recovered pasa_asmbl_25881.p1, internal, 82490, 82702
-recovered pasa_asmbl_25881.p1, internal, 83038, 83199
-recovered pasa_asmbl_25881.p1, internal, 83614, 83742
-recovered pasa_asmbl_25881.p1, internal, 83857, 83945
-recovered pasa_asmbl_25881.p1, internal, 84079, 84202
-recovered pasa_asmbl_25881.p1, internal, 84410, 84618
-recovered pasa_asmbl_25881.p1, internal, 85267, 85375
Valid prediction for snap_scaffold_20-snap.1747-T1
Valid prediction for GeneMark_model.82979_t
Valid prediction for snap_scaffold_20-snap.1720-T1
Valid prediction for GeneMark_model.82971_t
Valid prediction for snap_scaffold_20-snap.1735-T1
Valid prediction for snap_scaffold_20-snap.1729-T1
Valid prediction for snap_scaffold_20-snap.1742-T1
Valid prediction for GeneMark_model.82954_t
Valid prediction for GlimmerHMM_glimmerT_47510-T1
Valid prediction for Augustus_model.g31677.t1
Valid prediction for Augustus_model.g31679.t1
Valid prediction for snap_scaffold_20-snap.1731-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_47511-T1
Valid prediction for snap_scaffold_20-snap.1750-T1
Valid prediction for snap_scaffold_20-snap.1724-T1
Valid prediction for GeneMark_model.82966_t
Valid prediction for GlimmerHMM_glimmerT_47514-T1
Valid prediction for snap_scaffold_20-snap.1714-T1
Valid prediction for GeneMark_model.82959_t
Valid prediction for GlimmerHMM_glimmerT_47522-T1
Valid prediction for snap_scaffold_20-snap.1712-T1
Valid prediction for Augustus_model.g31678.t1
Valid prediction for snap_scaffold_20-snap.1716-T1
Valid prediction for Augustus_model.g31676.t1
Valid prediction for GeneMark_model.82976_t
Valid prediction for GeneMark_model.82973_t
Valid prediction for snap_scaffold_20-snap.1713-T1
Valid prediction for GlimmerHMM_glimmerT_47501-T1
Couldn't classify 43145, 43495
Sorry, prediction pasa_asmbl_25879.p4 fails validation.
(TGG)	 GG	43145-43495	TA	GCT
Valid prediction for GlimmerHMM_glimmerT_47504-T1
Valid prediction for Augustus_model.g31675.t1
Valid prediction for GlimmerHMM_glimmerT_47513-T1
Valid prediction for Augustus_model.g31682.t1
Valid prediction for GlimmerHMM_glimmerT_47505-T1
Valid prediction for snap_scaffold_20-snap.1748-T1
Valid prediction for snap_scaffold_20-snap.1723-T1
Valid prediction for snap_scaffold_20-snap.1710-T1
Valid prediction for snap_scaffold_20-snap.1726-T1
Valid prediction for Augustus_model.g31691.t1
Valid prediction for snap_scaffold_20-snap.1715-T1
Valid prediction for snap_scaffold_20-snap.1719-T1
Valid prediction for GlimmerHMM_glimmerT_47512-T1
Valid prediction for snap_scaffold_20-snap.1717-T1
Valid prediction for GeneMark_model.82977_t
Valid prediction for GeneMark_model.82964_t
Valid prediction for GlimmerHMM_glimmerT_47528-T1
Valid prediction for GlimmerHMM_glimmerT_47509-T1
Valid prediction for snap_scaffold_20-snap.1718-T1
Valid prediction for Augustus_model.g31683.t1
Valid prediction for pasa_asmbl_25884.p1
Valid prediction for GeneMark_model.82952_t
Valid prediction for snap_scaffold_20-snap.1739-T1
Valid prediction for snap_scaffold_20-snap.1721-T1
Valid prediction for GlimmerHMM_glimmerT_47503-T1
Valid prediction for GeneMark_model.82969_t
Valid prediction for GlimmerHMM_glimmerT_47502-T1
Couldn't classify 73430, 73561
Couldn't classify 74344, 74406
Sorry, prediction pasa_asmbl_25880.p2 fails validation.
(TAC)	 CC	73430-73561	GT	GGG
(GCT)	 AG	73890-74011	GT	AGG
(ATA)	 AG	74141-74210	GT	TGG
(ATC)	 AG	74344-74406	AC	GGA
-recovered pasa_asmbl_25880.p2, internal, 73890, 74011
-recovered pasa_asmbl_25880.p2, internal, 74141, 74210
Couldn't classify 13583, 13700
Couldn't classify 14503, 14609
Sorry, prediction pasa_asmbl_26279.p1 fails validation.
(CAG)	 TC	13583-13700	GT	AGG
(AGC)	 AG	14121-14207	GT	CTG
(GGC)	 AG	14503-14609	AT	AGA
-recovered pasa_asmbl_26279.p1, internal, 14121, 14207
Valid prediction for GlimmerHMM_glimmerT_47524-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g31680.t1
Valid prediction for snap_scaffold_20-snap.1727-T1
Valid prediction for CodingQuarry_transcript_30496-T1
Valid prediction for Augustus_model.g31688.t1
Valid prediction for GeneMark_model.82961_t
Valid prediction for snap_scaffold_20-snap.1749-T1
Valid prediction for GlimmerHMM_glimmerT_47515-T1
Valid prediction for GeneMark_model.82980_t
Valid prediction for pasa_asmbl_26844.p1
Valid prediction for GlimmerHMM_glimmerT_47525-T1
Valid prediction for snap_scaffold_20-snap.1728-T1
Valid prediction for snap_scaffold_20-snap.1741-T1
Valid prediction for GlimmerHMM_glimmerT_47523-T1
Valid prediction for GlimmerHMM_glimmerT_47526-T1
Valid prediction for CodingQuarry_transcript_30497-T1
Valid prediction for GeneMark_model.82958_t
Valid prediction for snap_scaffold_20-snap.1746-T1
Couldn't classify 57714, 57748
Sorry, prediction pasa_asmbl_26850.p1 fails validation.
(TTT)	 AG	57714-57748	GT	AGG
(GAG)	 AG	57976-58049	GT	GGG
(CCT)	 AG	58228-58312	GT	GAG
(GAA)	 AG	58580-58664	GT	AGG
(CTA)	 AG	59002-59118	GT	TGG
(AGC)	 AG	59230-59290	GT	TTG
(TCA)	 AG	59670-59793	GT	AAG
(GAA)	 AG	60002-60085	GT	TTG
(AGG)	 AG	60299-60411	GT	TGG
(GGA)	 AG	60532-60663	GT	CAG
(TGA)	 AG	60867-60966	GT	AGG
(GGC)	 AG	61300-61392	GT	GTG
(ATT)	 AG	61572-61656	GT	AGG
(ACG)	 AG	61883-62145	GT	AGG
(ATA)	 AG	62335-62429	GT	AGG
(GAG)	 AG	62685-62788	GT	TGG
(ATC)	 AG	62993-63066	GT	AGG
(GGT)	 AG	63367-63437	GT	GGG
(GAA)	 AG	63587-63675	GT	TAG
(ACG)	 AG	63837-63921	GT	CTG
(TGG)	 AG	66049-66158	CC	GAC
-recovered pasa_asmbl_26850.p1, terminal, 66049, 66158
-recovered pasa_asmbl_26850.p1, internal, 57714, 57748
-recovered pasa_asmbl_26850.p1, internal, 57976, 58049
-recovered pasa_asmbl_26850.p1, internal, 58228, 58312
-recovered pasa_asmbl_26850.p1, internal, 58580, 58664
-recovered pasa_asmbl_26850.p1, internal, 59002, 59118
-recovered pasa_asmbl_26850.p1, internal, 59230, 59290
-recovered pasa_asmbl_26850.p1, internal, 59670, 59793
-recovered pasa_asmbl_26850.p1, internal, 60002, 60085
-recovered pasa_asmbl_26850.p1, internal, 60299, 60411
-recovered pasa_asmbl_26850.p1, internal, 60532, 60663
-recovered pasa_asmbl_26850.p1, internal, 60867, 60966
-recovered pasa_asmbl_26850.p1, internal, 61300, 61392
-recovered pasa_asmbl_26850.p1, internal, 61572, 61656
-recovered pasa_asmbl_26850.p1, internal, 61883, 62145
-recovered pasa_asmbl_26850.p1, internal, 62335, 62429
-recovered pasa_asmbl_26850.p1, internal, 62685, 62788
-recovered pasa_asmbl_26850.p1, internal, 62993, 63066
-recovered pasa_asmbl_26850.p1, internal, 63367, 63437
-recovered pasa_asmbl_26850.p1, internal, 63587, 63675
-recovered pasa_asmbl_26850.p1, internal, 63837, 63921
Valid prediction for Augustus_model.g31685.t1
Couldn't classify 24486, 24637
Sorry, prediction pasa_asmbl_26854.p1 fails validation.
(GAG)	 AG	24486-24637	GT	AGG
(GTA)	 AG	24947-25061	GT	AGG
(GCC)	 AG	25366-25568	GT	AGG
(TAG)	 AG	25758-25926	GT	AGG
(CTG)	 AG	26060-26207	GT	AGG
(AAA)	 AG	27641-27732	GT	AGG
(GCG)	 AG	28508-28603	GT	GGG
(CCA)	 AG	28719-28830	GT	TGG
(ATG)	 AG	28973-29070	GT	AGG
(CAT)	 AG	29206-29308	GT	CGG
(CCC)	 AG	29446-29589	GT	ATG
(CCT)	 AG	29782-29987	GT	AGG
(GTT)	 AG	30420-30542	GT	AGG
(AAT)	 AG	30876-31001	GT	AGG
(GTG)	 AG	31397-31558	GT	TGG
(CAT)	 AG	31790-31937	GT	AAG
(CAA)	 AG	32081-32119	GT	TCG
(ATA)	 AG	32296-32673	GT	TGG
(GTT)	 AG	32906-33042	GA	AAG
-recovered pasa_asmbl_26854.p1, initial, 28973, 29070
-recovered pasa_asmbl_26854.p1, terminal, 32906, 33042
-recovered pasa_asmbl_26854.p1, internal, 24486, 24637
-recovered pasa_asmbl_26854.p1, internal, 24947, 25061
-recovered pasa_asmbl_26854.p1, internal, 25366, 25568
-recovered pasa_asmbl_26854.p1, internal, 25758, 25926
-recovered pasa_asmbl_26854.p1, internal, 26060, 26207
-recovered pasa_asmbl_26854.p1, internal, 27641, 27732
-recovered pasa_asmbl_26854.p1, internal, 28508, 28603
-recovered pasa_asmbl_26854.p1, internal, 28719, 28830
-recovered pasa_asmbl_26854.p1, internal, 28973, 29070
-recovered pasa_asmbl_26854.p1, internal, 29206, 29308
-recovered pasa_asmbl_26854.p1, internal, 29446, 29589
-recovered pasa_asmbl_26854.p1, internal, 29782, 29987
-recovered pasa_asmbl_26854.p1, internal, 30420, 30542
-recovered pasa_asmbl_26854.p1, internal, 30876, 31001
-recovered pasa_asmbl_26854.p1, internal, 31397, 31558
-recovered pasa_asmbl_26854.p1, internal, 31790, 31937
-recovered pasa_asmbl_26854.p1, internal, 32081, 32119
-recovered pasa_asmbl_26854.p1, internal, 32296, 32673
Valid prediction for snap_scaffold_20-snap.1734-T1
Valid prediction for GlimmerHMM_glimmerT_47516-T1
Couldn't classify 86268, 86292
Sorry, prediction pasa_asmbl_26841.p1 fails validation.
(CTG)	 AC	86268-86292	GT	AGG
(ATG)	 AG	86807-86862	GT	AGG
(GAA)	 AG	87028-87081	GT	CTG
(CGG)	 AG	87271-87334	GT	TGG
(ACA)	 AG	87452-87540	GT	AGG
(AGT)	 AG	87902-87985	GT	AGG
(ATA)	 AG	88099-88168	GT	CTG
(ACA)	 AG	88311-88417	GT	AGG
(ATG)	 AG	88729-88862	GT	AAG
(GGA)	 AG	89244-89358	CA	AAC
add_exon() Sorry, pasa_asmbl_26841.p1 86807-86862-initial-1 is invalid.
-recovered pasa_asmbl_26841.p1, initial, 86807, 86862
-recovered pasa_asmbl_26841.p1, initial, 88729, 88862
-recovered pasa_asmbl_26841.p1, terminal, 89244, 89358
-recovered pasa_asmbl_26841.p1, internal, 86807, 86862
-recovered pasa_asmbl_26841.p1, internal, 87028, 87081
-recovered pasa_asmbl_26841.p1, internal, 87271, 87334
-recovered pasa_asmbl_26841.p1, internal, 87452, 87540
-recovered pasa_asmbl_26841.p1, internal, 87902, 87985
-recovered pasa_asmbl_26841.p1, internal, 88099, 88168
-recovered pasa_asmbl_26841.p1, internal, 88311, 88417
-recovered pasa_asmbl_26841.p1, internal, 88729, 88862
Valid prediction for snap_scaffold_20-snap.1737-T1
Valid prediction for CodingQuarry_transcript_30498-T1
Valid prediction for snap_scaffold_20-snap.1736-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_47518-T1
Valid prediction for GlimmerHMM_glimmerT_47500-T1
Valid prediction for snap_scaffold_20-snap.1709-T1
Couldn't classify 91689, 91775
Couldn't classify 93836, 94043
Sorry, prediction pasa_asmbl_26839.p1 fails validation.
(GTC)	 CT	91689-91775	GT	ATG
(GGG)	 AG	91932-92033	GT	CCG
(TAT)	 AG	92493-92621	GT	GGG
(AAA)	 AG	92969-93072	GT	GGG
(AGT)	 AG	93836-94043	CA	TGC
-recovered pasa_asmbl_26839.p1, internal, 91932, 92033
-recovered pasa_asmbl_26839.p1, internal, 92493, 92621
-recovered pasa_asmbl_26839.p1, internal, 92969, 93072
Valid prediction for GeneMark_model.82978_t
Valid prediction for snap_scaffold_20-snap.1740-T1
Valid prediction for HiQ_model.g31693.t1
Valid prediction for pasa_asmbl_26847.p1
Valid prediction for GeneMark_model.82972_t
Valid prediction for GeneMark_model.82982_t
Valid prediction for GlimmerHMM_glimmerT_47520-T1
Valid prediction for Augustus_model.g31690.t1
Valid prediction for GeneMark_model.82967_t
Valid prediction for snap_scaffold_20-snap.1743-T1
Valid prediction for CodingQuarry_transcript_30501-T1
Valid prediction for snap_scaffold_20-snap.1744-T1
Valid prediction for snap_scaffold_20-snap.1745-T1
Valid prediction for GeneMark_model.82981_t
Valid prediction for HiQ_model.g31686.t1
Valid prediction for GeneMark_model.82957_t
Valid prediction for GeneMark_model.82983_t
Valid prediction for GeneMark_model.82974_t
Valid prediction for pasa_asmbl_26860.p1
Valid prediction for GlimmerHMM_glimmerT_47521-T1
Valid prediction for GeneMark_model.82962_t
Valid prediction for GlimmerHMM_glimmerT_47517-T1
Valid prediction for snap_scaffold_20-snap.1711-T1
Valid prediction for GeneMark_model.82965_t
Valid prediction for Augustus_model.g31687.t1
Valid prediction for snap_scaffold_20-snap.1738-T1
Valid prediction for snap_scaffold_20-snap.1732-T1
Valid prediction for GeneMark_model.82956_t
Valid prediction for Augustus_model.g31684.t1
Valid prediction for CodingQuarry_transcript_30499-T1
Valid prediction for snap_scaffold_20-snap.1733-T1
Valid prediction for GeneMark_model.82975_t
Valid prediction for Augustus_model.g31692.t1
Valid prediction for GeneMark_model.82955_t
Valid prediction for GlimmerHMM_glimmerT_47506-T1
Valid prediction for snap_scaffold_20-snap.1725-T1
Valid prediction for GeneMark_model.82970_t
Valid prediction for GlimmerHMM_glimmerT_47519-T1
Valid prediction for HiQ_model.g31694.t1
Valid prediction for GeneMark_model.82963_t
Valid prediction for snap_scaffold_20-snap.1730-T1
Valid prediction for pasa_asmbl_26855.p1
Valid prediction for snap_scaffold_20-snap.1722-T1
Valid prediction for GeneMark_model.82950_t
Valid prediction for GlimmerHMM_glimmerT_47508-T1
Valid prediction for GlimmerHMM_glimmerT_47527-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 51901, rend_intergenic: 51898  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11686, rend_intergenic: 9202  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70817, rend_intergenic: 67015  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77553, rend_intergenic: 73327  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86807, rend_intergenic: 79532  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98966, rend_intergenic: 91578  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117088, rend_intergenic: 113893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 189485
-exon list size: 622


building trellis

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13.3    
13.5    
13.6    
13.8    
13.9    
14.1    
14.3    
14.4    
14.6    
14.7    
14.9    
15.1    
15.2    
15.4    
15.5    
15.7    
15.9    
16.0    
16.2    
16.3    
16.5    
16.7    
16.8    
17.0    
17.1    
17.3    
17.5    
17.6    
17.8    
17.9    
18.1    
18.3    
18.4    
18.6    
18.8    
18.9    
19.1    
19.2    
19.4    
19.6    
19.7    
19.9    
20.0    
20.2    
20.4    
20.5    
20.7    
20.8    
21.0    
21.2    
21.3    
21.5    
21.6    
21.8    
22.0    
22.1    
22.3    
22.4    
22.6    
22.8    
22.9    
23.1    
23.2    
23.4    
23.6    
23.7    
23.9    
24.0    
24.2    
24.4    
24.5    
24.7    
24.8    
25.0    
25.2    
25.3    
25.5    
25.6    
25.8    
26.0    
26.1    
26.3    
26.4    
26.6    
26.8    
26.9    
27.1    
27.2    
27.4    
27.6    
27.7    
27.9    
28.0    
28.2    
28.4    
28.5    
28.7    
28.8    
29.0    
29.2    
29.3    
29.5    
29.6    
29.8    
30.0    
30.1    
30.3    
30.4    
30.6    
30.8    
30.9    
31.1    
31.2    
31.4    
31.6    
31.7    
31.9    
32.1    
32.2    
32.4    
32.5    
32.7    
32.9    
33.0    
33.2    
33.3    
33.5    
33.7    
33.8    
34.0    
34.1    
34.3    
34.5    
34.6    
34.8    
34.9    
35.1    
35.3    
35.4    
35.6    
35.7    
35.9    
36.1    
36.2    
36.4    
36.5    
36.7    
36.9    
37.0    
37.2    
37.3    
37.5    
37.7    
37.8    
38.0    
38.1    
38.3    
38.5    
38.6    
38.8    
38.9    
39.1    
39.3    
39.4    
39.6    
39.7    
39.9    
40.1    
40.2    
40.4    
40.5    
40.7    
40.9    
41.0    
41.2    
41.3    
41.5    
41.7    
41.8    
42.0    
42.1    
42.3    
42.5    
42.6    
42.8    
42.9    
43.1    
43.3    
43.4    
43.6    
43.8    
43.9    
44.1    
44.2    
44.4    
44.6    
44.7    
44.9    
45.0    
45.2    
45.4    
45.5    
45.7    
45.8    
46.0    
46.2    
46.3    
46.5    
46.6    
46.8    
47.0    
47.1    
47.3    
47.4    
47.6    
47.8    
47.9    
48.1    
48.2    
48.4    
48.6    
48.7    
48.9    
49.0    
49.2    
49.4    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.6    
50.8    
51.0    
51.1    
51.3    
51.4    
51.6    
51.8    
51.9    
52.1    
52.2    
52.4    
52.6    
52.7    
52.9    
53.0    
53.2    
53.4    
53.5    
53.7    
53.8    
54.0    
54.2    
54.3    
54.5    
54.6    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.8    
55.9    
56.1    
56.2    
56.4    
56.6    
56.7    
56.9    
57.1    
57.2    
57.4    
57.5    
57.7    
57.9    
58.0    
58.2    
58.3    
58.5    
58.7    
58.8    
59.0    
59.1    
59.3    
59.5    
59.6    
59.8    
59.9    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.1    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.3    
62.5    
62.7    
62.8    
63.0    
63.1    
63.3    
63.5    
63.6    
63.8    
63.9    
64.1    
64.3    
64.4    
64.6    
64.7    
64.9    
65.1    
65.2    
65.4    
65.5    
65.7    
65.9    
66.0    
66.2    
66.3    
66.5    
66.7    
66.8    
67.0    
67.1    
67.3    
67.5    
67.6    
67.8    
67.9    
68.1    
68.3    
68.4    
68.6    
68.8    
68.9    
69.1    
69.2    
69.4    
69.6    
69.7    
69.9    
70.0    
70.2    
70.4    
70.5    
70.7    
70.8    
71.0    
71.2    
71.3    
71.5    
71.6    
71.8    
72.0    
72.1    
72.3    
72.4    
72.6    
72.8    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.4    
74.5    
74.7    
74.8    
75.0    
75.2    
75.3    
75.5    
75.6    
75.8    
76.0    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.2    
77.4    
77.6    
77.7    
77.9    
78.0    
78.2    
78.4    
78.5    
78.7    
78.8    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
80.0    
80.1    
80.3    
80.4    
80.6    
80.8    
80.9    
81.1    
81.2    
81.4    
81.6    
81.7    
81.9    
82.1    
82.2    
82.4    
82.5    
82.7    
82.9    
83.0    
83.2    
83.3    
83.5    
83.7    
83.8    
84.0    
84.1    
84.3    
84.5    
84.6    
84.8    
84.9    
85.1    
85.3    
85.4    
85.6    
85.7    
85.9    
86.1    
86.2    
86.4    
86.5    
86.7    
86.9    
87.0    
87.2    
87.3    
87.5    
87.7    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.1    
90.2    
90.4    
90.5    
90.7    
90.9    
91.0    
91.2    
91.3    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.5    
92.6    
92.8    
92.9    
93.1    
93.3    
93.4    
93.6    
93.8    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.0    
95.2    
95.4    
95.5    
95.7    
95.8    
96.0    
96.2    
96.3    
96.5    
96.6    
96.8    
97.0    
97.1    
97.3    
97.4    
97.6    
97.8    
97.9    
98.1    
98.2    
98.4    
98.6    
98.7    
98.9    
99.0    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 25 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 51901, rend_intergenic: 51898  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11686, rend_intergenic: 9202  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70817, rend_intergenic: 67015  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77553, rend_intergenic: 73327  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86807, rend_intergenic: 79532  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98966, rend_intergenic: 91578  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117088, rend_intergenic: 113893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support