-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_20/scaffold_20_6583321-6780896

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 189818, 189922
Sorry, prediction pasa_asmbl_25837.p2 fails validation.
(TCT)	 TC	189818-189922	GT	TGG
(ACC)	 AG	190111-190344	GT	AGG
(GCG)	 AG	190588-190770	GT	AGG
(GCA)	 AG	190895-191044	GT	AGG
(GAT)	 AG	191317-191406	CA	AAC
-recovered pasa_asmbl_25837.p2, terminal, 191317, 191406
-recovered pasa_asmbl_25837.p2, internal, 190111, 190344
-recovered pasa_asmbl_25837.p2, internal, 190588, 190770
-recovered pasa_asmbl_25837.p2, internal, 190895, 191044
Couldn't classify 36084, 36159
Sorry, prediction pasa_asmbl_25820.p1 fails validation.
(GTG)	 CA	36084-36159	GT	AGG
(AGT)	 AG	38432-38572	GT	AGG
(GCC)	 AG	38784-39016	TG	GAT
-recovered pasa_asmbl_25820.p1, terminal, 38784, 39016
-recovered pasa_asmbl_25820.p1, internal, 38432, 38572
Valid prediction for snap_scaffold_20-snap.1464-T1
Valid prediction for Augustus_model.g31542.t1
Valid prediction for snap_scaffold_20-snap.1470-T1
Valid prediction for Augustus_model.g31553.t1
Valid prediction for snap_scaffold_20-snap.1483-T1
Valid prediction for Augustus_model.g31543.t1
Couldn't classify 139542, 139644
Sorry, prediction pasa_asmbl_25825.p1 fails validation.
(AAC)	 CA	139542-139644	GT	GTG
(ACC)	 AG	139827-140027	GT	AGG
(ATT)	 AG	140249-140325	GT	AGG
(CTG)	 AG	140447-140570	GC	AGG
(AGC)	 AG	140704-140795	GT	GGG
(AGG)	 AG	140929-140994	GT	AGG
(ACT)	 AG	141123-141307	GT	AGG
(TCT)	 AG	141490-141615	GT	AGG
(TGT)	 AG	141725-141961	GT	CTG
(AAA)	 AG	142216-142294	GT	TCG
(CTC)	 AG	142431-142523	GT	AGG
(ATC)	 AG	142668-142775	GT	AGG
(GTG)	 AG	142998-143111	AC	AGA
-recovered pasa_asmbl_25825.p1, terminal, 142998, 143111
-recovered pasa_asmbl_25825.p1, internal, 139827, 140027
-recovered pasa_asmbl_25825.p1, internal, 140249, 140325
-recovered pasa_asmbl_25825.p1, internal, 140447, 140570
-recovered pasa_asmbl_25825.p1, internal, 140704, 140795
-recovered pasa_asmbl_25825.p1, internal, 140929, 140994
-recovered pasa_asmbl_25825.p1, internal, 141123, 141307
-recovered pasa_asmbl_25825.p1, internal, 141490, 141615
-recovered pasa_asmbl_25825.p1, internal, 141725, 141961
-recovered pasa_asmbl_25825.p1, internal, 142216, 142294
-recovered pasa_asmbl_25825.p1, internal, 142431, 142523
-recovered pasa_asmbl_25825.p1, internal, 142668, 142775
Valid prediction for CodingQuarry_transcript_30473-T1
Valid prediction for snap_scaffold_20-snap.1458-T1
Valid prediction for snap_scaffold_20-snap.1455-T1
Valid prediction for snap_scaffold_20-snap.1486-T1
Valid prediction for snap_scaffold_20-snap.1485-T1
Valid prediction for snap_scaffold_20-snap.1452-T1
Valid prediction for GeneMark_model.82694_t
Valid prediction for GeneMark_model.82677_t
Valid prediction for GeneMark_model.82696_t
Valid prediction for GeneMark_model.82667_t
Valid prediction for GeneMark_model.82682_t
Valid prediction for GlimmerHMM_glimmerT_47312-T1
Valid prediction for GlimmerHMM_glimmerT_47333-T1
Valid prediction for GlimmerHMM_glimmerT_47337-T1
Valid prediction for snap_scaffold_20-snap.1494-T1
Valid prediction for GlimmerHMM_glimmerT_47324-T1
Valid prediction for Augustus_model.g31539.t1
Couldn't classify 161308, 162332
Couldn't classify 164075, 164157
Sorry, prediction pasa_asmbl_25827.p1 fails validation.
(GAG)	 CG	161308-162332	GT	AGG
(GTA)	 AG	163135-163259	GT	AGG
(AGA)	 AG	163592-163720	GT	AGG
(AAA)	 AG	164075-164157	GT	CGG
-recovered pasa_asmbl_25827.p1, internal, 163135, 163259
-recovered pasa_asmbl_25827.p1, internal, 163592, 163720
-recovered pasa_asmbl_25827.p1, internal, 164075, 164157
Valid prediction for GlimmerHMM_glimmerT_47319-T1
Valid prediction for snap_scaffold_20-snap.1454-T1
Valid prediction for GlimmerHMM_glimmerT_47314-T1
Valid prediction for GeneMark_model.82695_t
Valid prediction for GlimmerHMM_glimmerT_47335-T1
Valid prediction for GlimmerHMM_glimmerT_47318-T1
Couldn't classify 164567, 164578
Couldn't classify 167451, 167488
Sorry, prediction pasa_asmbl_25829.p1 fails validation.
(GAA)	 CA	164567-164578	GT	AGG
(AAG)	 AG	164686-164920	GT	AGG
(CAG)	 AG	165120-165275	GT	AGG
(GCG)	 AG	167451-167488	AG	CCA
-recovered pasa_asmbl_25829.p1, internal, 164686, 164920
-recovered pasa_asmbl_25829.p1, internal, 165120, 165275
Valid prediction for snap_scaffold_20-snap.1491-T1
Valid prediction for Augustus_model.g31552.t1
Valid prediction for GeneMark_model.82689_t
Valid prediction for GlimmerHMM_glimmerT_47323-T1
Valid prediction for GlimmerHMM_glimmerT_47315-T1
Valid prediction for GlimmerHMM_glimmerT_47334-T1
Valid prediction for HiQ_model.g31554.t1
Valid prediction for GeneMark_model.82683_t
Couldn't classify 189659, 189736
Sorry, prediction pasa_asmbl_25835.p1 fails validation.
(ATG)	 CA	188147-188215	GT	ACG
(GAA)	 AG	188309-188449	GT	AGG
(CCT)	 AG	188748-188836	GT	AGG
(AAA)	 AG	189002-189270	GT	AGG
(GTG)	 AG	189449-189543	GT	CAG
(TCC)	 AG	189659-189736	GT	CCG
-recovered pasa_asmbl_25835.p1, initial, 188147, 188215
-recovered pasa_asmbl_25835.p1, internal, 188309, 188449
-recovered pasa_asmbl_25835.p1, internal, 188748, 188836
-recovered pasa_asmbl_25835.p1, internal, 189002, 189270
-recovered pasa_asmbl_25835.p1, internal, 189449, 189543
-recovered pasa_asmbl_25835.p1, internal, 189659, 189736
Valid prediction for snap_scaffold_20-snap.1484-T1
Couldn't classify 158285, 158379
Couldn't classify 159214, 159295
Couldn't classify 159742, 159850
Couldn't classify 160535, 160977
Sorry, prediction pasa_asmbl_26305.p1 fails validation.
(AAG)	 CC	158285-158379	GT	AGG
(GAC)	 AG	158490-158621	GT	AGG
(GCT)	 AG	159214-159295	AT	CCA
(CGC)	 AC	159742-159850	GT	AGG
(ATG)	 AG	160080-160373	GT	AGG
(GGA)	 AG	160535-160977	AC	GGA
add_exon() Sorry, pasa_asmbl_26305.p1 160080-160373-initial-1 is invalid.
-recovered pasa_asmbl_26305.p1, initial, 160080, 160373
-recovered pasa_asmbl_26305.p1, internal, 158490, 158621
-recovered pasa_asmbl_26305.p1, internal, 160080, 160373
Valid prediction for GlimmerHMM_glimmerT_47317-T1
Couldn't classify 145543, 145879
Couldn't classify 148240, 148313
Sorry, prediction pasa_asmbl_25826.p1 fails validation.
(TTC)	 AC	145543-145879	GT	AGG
(GCC)	 AG	148240-148313	CC	TCC
Valid prediction for HiQ_model.g31555.t1
Valid prediction for snap_scaffold_20-snap.1488-T1
Valid prediction for Augustus_model.g31544.t1
Valid prediction for GeneMark_model.82702_t
Valid prediction for snap_scaffold_20-snap.1459-T1
Valid prediction for GlimmerHMM_glimmerT_47330-T1
Valid prediction for GeneMark_model.82698_t
Valid prediction for snap_scaffold_20-snap.1493-T1
Valid prediction for GeneMark_model.82671_t
Valid prediction for snap_scaffold_20-snap.1475-T1
Valid prediction for Augustus_model.g31562.t1
Valid prediction for snap_scaffold_20-snap.1480-T1
Valid prediction for Augustus_model.g31556.t1
Couldn't classify 137770, 137901
Couldn't classify 139325, 139355
Sorry, prediction pasa_asmbl_25824.p1 fails validation.
(GAG)	 AT	137770-137901	GT	AGG
(GTT)	 AG	138370-138483	GT	AAG
(GTT)	 AG	138581-138637	GT	CTG
(GTA)	 AG	138804-138952	GT	AGG
(GTG)	 AG	139325-139355	CA	AGC
-recovered pasa_asmbl_25824.p1, internal, 138370, 138483
-recovered pasa_asmbl_25824.p1, internal, 138581, 138637
-recovered pasa_asmbl_25824.p1, internal, 138804, 138952
Valid prediction for GlimmerHMM_glimmerT_47325-T1
Valid prediction for HiQ_model.g31561.t1
Valid prediction for HiQ_model.g31559.t1
Valid prediction for snap_scaffold_20-snap.1467-T1
Valid prediction for GeneMark_model.82674_t
Valid prediction for snap_scaffold_20-snap.1473-T1
Valid prediction for GlimmerHMM_glimmerT_47332-T1
Valid prediction for Augustus_model.g31558.t1
Valid prediction for GeneMark_model.82687_t
Valid prediction for GeneMark_model.82705_t
Couldn't classify 168868, 169137
Couldn't classify 172557, 172731
Sorry, prediction pasa_asmbl_25830.p1 fails validation.
(CCC)	 CC	168868-169137	GT	AGG
(ATG)	 AG	169429-169590	GT	AGG
(GTG)	 AG	170267-170349	GT	AGG
(GAT)	 AG	171393-171618	GT	AGG
(GAG)	 AG	171754-172082	GT	AAG
(GTT)	 AG	172557-172731	TG	AGT
-recovered pasa_asmbl_25830.p1, initial, 169429, 169590
-recovered pasa_asmbl_25830.p1, internal, 169429, 169590
-recovered pasa_asmbl_25830.p1, internal, 170267, 170349
-recovered pasa_asmbl_25830.p1, internal, 171393, 171618
-recovered pasa_asmbl_25830.p1, internal, 171754, 172082
Valid prediction for GeneMark_model.82692_t
Valid prediction for snap_scaffold_20-snap.1476-T1
Valid prediction for snap_scaffold_20-snap.1461-T1
Valid prediction for GlimmerHMM_glimmerT_47340-T1
Valid prediction for GeneMark_model.82668_t
Valid prediction for GeneMark_model.82669_t
Valid prediction for Augustus_model.g31549.t1
Valid prediction for GlimmerHMM_glimmerT_47336-T1
Valid prediction for snap_scaffold_20-snap.1456-T1
Valid prediction for GlimmerHMM_glimmerT_47331-T1
Valid prediction for GeneMark_model.82672_t
Valid prediction for GeneMark_model.82700_t
Valid prediction for GeneMark_model.82690_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for pasa_asmbl_26766.p1
Valid prediction for Augustus_model.g31545.t1
Valid prediction for snap_scaffold_20-snap.1481-T1
Valid prediction for Augustus_model.g31540.t1
Valid prediction for snap_scaffold_20-snap.1489-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_20-snap.1474-T1
Valid prediction for GeneMark_model.82703_t
Valid prediction for GeneMark_model.82673_t
Valid prediction for snap_scaffold_20-snap.1453-T1
Valid prediction for GeneMark_model.82679_t
Valid prediction for GeneMark_model.82688_t
Valid prediction for snap_scaffold_20-snap.1462-T1
Valid prediction for snap_scaffold_20-snap.1490-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.82684_t
Valid prediction for snap_scaffold_20-snap.1478-T1
Valid prediction for pasa_asmbl_26765.p2
Valid prediction for GeneMark_model.82701_t
Valid prediction for GeneMark_model.82693_t
Valid prediction for CodingQuarry_transcript_30474-T1
Valid prediction for GlimmerHMM_glimmerT_47328-T1
Valid prediction for GeneMark_model.82680_t
Valid prediction for GeneMark_model.82686_t
Valid prediction for GlimmerHMM_glimmerT_47313-T1
Valid prediction for GlimmerHMM_glimmerT_47316-T1
Valid prediction for HiQ_model.g31547.t1
Valid prediction for snap_scaffold_20-snap.1472-T1
Valid prediction for GlimmerHMM_glimmerT_47339-T1
Valid prediction for snap_scaffold_20-snap.1469-T1
Valid prediction for snap_scaffold_20-snap.1479-T1
Couldn't classify 134157, 134307
Couldn't classify 140315, 140523
Sorry, prediction pasa_asmbl_26760.p1 fails validation.
(ACG)	 AG	134157-134307	GT	CGG
(GGC)	 AG	136221-136339	GT	AGG
(CTC)	 AG	137627-137772	GT	AAG
(CTA)	 AG	138040-138187	GT	AGG
(GTG)	 AG	139216-139399	GT	AGG
(GTA)	 AG	140315-140523	TG	TCT
-recovered pasa_asmbl_26760.p1, internal, 134157, 134307
-recovered pasa_asmbl_26760.p1, internal, 136221, 136339
-recovered pasa_asmbl_26760.p1, internal, 137627, 137772
-recovered pasa_asmbl_26760.p1, internal, 138040, 138187
-recovered pasa_asmbl_26760.p1, internal, 139216, 139399
Valid prediction for GlimmerHMM_glimmerT_47327-T1
Valid prediction for GeneMark_model.82670_t
Valid prediction for snap_scaffold_20-snap.1466-T1
Valid prediction for snap_scaffold_20-snap.1482-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.82706_t
Valid prediction for GlimmerHMM_glimmerT_47338-T1
Valid prediction for Augustus_model.g31551.t1
Valid prediction for GeneMark_model.82681_t
Valid prediction for GlimmerHMM_glimmerT_47326-T1
Valid prediction for GeneMark_model.82691_t
Valid prediction for snap_scaffold_20-snap.1471-T1
Valid prediction for Augustus_model.g31541.t1
Valid prediction for GeneMark_model.82699_t
Valid prediction for GeneMark_model.82675_t
Valid prediction for snap_scaffold_20-snap.1463-T1
Valid prediction for snap_scaffold_20-snap.1460-T1
Valid prediction for snap_scaffold_20-snap.1457-T1
Valid prediction for GlimmerHMM_glimmerT_47341-T1
Valid prediction for GlimmerHMM_glimmerT_47322-T1
Couldn't classify 13011, 13176
Sorry, prediction pasa_asmbl_26770.p2 fails validation.
(GAC)	 TC	13011-13176	GT	GGG
(GGA)	 AG	13397-13584	AG	GAA
-recovered pasa_asmbl_26770.p2, terminal, 13397, 13584
Valid prediction for GeneMark_model.82676_t
Couldn't classify 146059, 146110
Sorry, prediction pasa_asmbl_26758.p1 fails validation.
(GGG)	 AG	146059-146110	GT	TGG
(TCC)	 AG	147366-147553	GT	CTG
(TTA)	 AG	148320-148530	GT	CGG
(GTA)	 AG	148778-148857	GT	AAG
(GGG)	 AG	148975-149482	GT	TGG
(ACC)	 AG	149849-150071	GT	AGG
(GTA)	 AG	150196-150817	GT	AGG
(TAT)	 AG	151406-151685	GT	AGG
(CAT)	 AG	152464-152834	GT	GAG
-recovered pasa_asmbl_26758.p1, terminal, 151406, 151685
-recovered pasa_asmbl_26758.p1, terminal, 152464, 152834
-recovered pasa_asmbl_26758.p1, internal, 146059, 146110
-recovered pasa_asmbl_26758.p1, internal, 147366, 147553
-recovered pasa_asmbl_26758.p1, internal, 148320, 148530
-recovered pasa_asmbl_26758.p1, internal, 148778, 148857
-recovered pasa_asmbl_26758.p1, internal, 148975, 149482
-recovered pasa_asmbl_26758.p1, internal, 149849, 150071
-recovered pasa_asmbl_26758.p1, internal, 150196, 150817
-recovered pasa_asmbl_26758.p1, internal, 151406, 151685
-recovered pasa_asmbl_26758.p1, internal, 152464, 152834
Valid prediction for snap_scaffold_20-snap.1492-T1
Valid prediction for GeneMark_model.82697_t
Valid prediction for snap_scaffold_20-snap.1477-T1
Valid prediction for Augustus_model.g31550.t1
Valid prediction for Augustus_model.g31546.t1
Valid prediction for GeneMark_model.82704_t
Valid prediction for HiQ_model.g31548.t1
Valid prediction for GlimmerHMM_glimmerT_47329-T1
Valid prediction for snap_scaffold_20-snap.1487-T1
Valid prediction for snap_scaffold_20-snap.1468-T1
Valid prediction for CodingQuarry_transcript_30475-T1
Valid prediction for GlimmerHMM_glimmerT_47321-T1
Valid prediction for GlimmerHMM_glimmerT_47320-T1
Valid prediction for Augustus_model.g31557.t1
Valid prediction for GeneMark_model.82678_t
Valid prediction for Augustus_model.g31560.t1
Valid prediction for snap_scaffold_20-snap.1465-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 30457, rend_intergenic: 28093  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58371, rend_intergenic: 53138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74163, rend_intergenic: 61142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91326, rend_intergenic: 88574  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100804, rend_intergenic: 94951  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113227, rend_intergenic: 101857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131873, rend_intergenic: 125902  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166737, rend_intergenic: 151157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178009, rend_intergenic: 167868  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 197576
-exon list size: 715


building trellis

0.1    
0.3    
0.4    
0.6    
0.7    
0.8    
1.0    
1.1    
1.3    
1.4    
1.5    
1.7    
1.8    
2.0    
2.1    
2.2    
2.4    
2.5    
2.6    
2.8    
2.9    
3.1    
3.2    
3.3    
3.5    
3.6    
3.8    
3.9    
4.0    
4.2    
4.3    
4.5    
4.6    
4.7    
4.9    
5.0    
5.2    
5.3    
5.4    
5.6    
5.7    
5.9    
6.0    
6.1    
6.3    
6.4    
6.6    
6.7    
6.8    
7.0    
7.1    
7.3    
7.4    
7.5    
7.7    
7.8    
7.9    
8.1    
8.2    
8.4    
8.5    
8.6    
8.8    
8.9    
9.1    
9.2    
9.3    
9.5    
9.6    
9.8    
9.9    
10.0    
10.2    
10.3    
10.5    
10.6    
10.7    
10.9    
11.0    
11.2    
11.3    
11.4    
11.6    
11.7    
11.9    
12.0    
12.1    
12.3    
12.4    
12.6    
12.7    
12.8    
13.0    
13.1    
13.2    
13.4    
13.5    
13.7    
13.8    
13.9    
14.1    
14.2    
14.4    
14.5    
14.6    
14.8    
14.9    
15.1    
15.2    
15.3    
15.5    
15.6    
15.8    
15.9    
16.0    
16.2    
16.3    
16.5    
16.6    
16.7    
16.9    
17.0    
17.2    
17.3    
17.4    
17.6    
17.7    
17.9    
18.0    
18.1    
18.3    
18.4    
18.5    
18.7    
18.8    
19.0    
19.1    
19.2    
19.4    
19.5    
19.7    
19.8    
19.9    
20.1    
20.2    
20.4    
20.5    
20.6    
20.8    
20.9    
21.1    
21.2    
21.3    
21.5    
21.6    
21.8    
21.9    
22.0    
22.2    
22.3    
22.5    
22.6    
22.7    
22.9    
23.0    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
24.0    
24.1    
24.3    
24.4    
24.5    
24.7    
24.8    
25.0    
25.1    
25.2    
25.4    
25.5    
25.7    
25.8    
25.9    
26.1    
26.2    
26.4    
26.5    
26.6    
26.8    
26.9    
27.1    
27.2    
27.3    
27.5    
27.6    
27.8    
27.9    
28.0    
28.2    
28.3    
28.5    
28.6    
28.7    
28.9    
29.0    
29.1    
29.3    
29.4    
29.6    
29.7    
29.8    
30.0    
30.1    
30.3    
30.4    
30.5    
30.7    
30.8    
31.0    
31.1    
31.2    
31.4    
31.5    
31.7    
31.8    
31.9    
32.1    
32.2    
32.4    
32.5    
32.6    
32.8    
32.9    
33.1    
33.2    
33.3    
33.5    
33.6    
33.8    
33.9    
34.0    
34.2    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.1    
35.3    
35.4    
35.6    
35.7    
35.8    
36.0    
36.1    
36.3    
36.4    
36.5    
36.7    
36.8    
37.0    
37.1    
37.2    
37.4    
37.5    
37.7    
37.8    
37.9    
38.1    
38.2    
38.4    
38.5    
38.6    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.9    
40.0    
40.2    
40.3    
40.4    
40.6    
40.7    
40.9    
41.0    
41.1    
41.3    
41.4    
41.6    
41.7    
41.8    
42.0    
42.1    
42.3    
42.4    
42.5    
42.7    
42.8    
43.0    
43.1    
43.2    
43.4    
43.5    
43.7    
43.8    
43.9    
44.1    
44.2    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.7    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.1    
47.3    
47.4    
47.6    
47.7    
47.8    
48.0    
48.1    
48.3    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.2    
52.3    
52.4    
52.6    
52.7    
52.9    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.1    
56.2    
56.3    
56.5    
56.6    
56.8    
56.9    
57.0    
57.2    
57.3    
57.5    
57.6    
57.7    
57.9    
58.0    
58.2    
58.3    
58.4    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.8    
60.0    
60.1    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.2    
64.3    
64.4    
64.6    
64.7    
64.9    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.1    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.6    
73.8    
73.9    
74.1    
74.2    
74.3    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.5    
77.7    
77.8    
78.0    
78.1    
78.2    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.4    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.8    
80.9    
81.0    
81.2    
81.3    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.6    
82.7    
82.8    
83.0    
83.1    
83.3    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.7    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.6    
85.8    
85.9    
86.1    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.1    
88.3    
88.4    
88.6    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.6    
91.8    
91.9    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.5    
95.7    
95.8    
96.0    
96.1    
96.2    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.7    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 35 predictions from path traversal
Error with prediction: snap lend_intergenic: 30457, rend_intergenic: 28093  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58371, rend_intergenic: 53138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74163, rend_intergenic: 61142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91326, rend_intergenic: 88574  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100804, rend_intergenic: 94951  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113227, rend_intergenic: 101857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131873, rend_intergenic: 125902  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166737, rend_intergenic: 151157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178009, rend_intergenic: 167868  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support