-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_20/scaffold_20_10437257-10830287 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_47917-T1 Valid prediction for GeneMark_model.83503_t Couldn't classify 341855, 342151 Sorry, prediction pasa_asmbl_26143.p1 fails validation. (GGT) TA 341855-342151 GT AGG (TCG) AG 343708-343842 GT AGG (GTG) AG 344015-344119 GT AGG (GTT) AG 344212-344262 GT AGG (CTC) AG 345676-345732 GT AGG (ACT) AG 345869-345961 GT AAG (GTC) AG 346150-346288 GT GGG (ATA) AG 346388-346515 GT AGG (GCG) AG 346695-346751 GT AGG (GCA) AG 346943-347014 GT AGG (AAC) AG 347216-347221 CA GAC -recovered pasa_asmbl_26143.p1, terminal, 347216, 347221 -recovered pasa_asmbl_26143.p1, internal, 343708, 343842 -recovered pasa_asmbl_26143.p1, internal, 344015, 344119 -recovered pasa_asmbl_26143.p1, internal, 344212, 344262 -recovered pasa_asmbl_26143.p1, internal, 345676, 345732 -recovered pasa_asmbl_26143.p1, internal, 345869, 345961 -recovered pasa_asmbl_26143.p1, internal, 346150, 346288 -recovered pasa_asmbl_26143.p1, internal, 346388, 346515 -recovered pasa_asmbl_26143.p1, internal, 346695, 346751 -recovered pasa_asmbl_26143.p1, internal, 346943, 347014 Valid prediction for GeneMark_model.83497_t Valid prediction for snap_scaffold_20-snap.2319-T1 Valid prediction for Augustus_model.g31968.t1 Valid prediction for snap_scaffold_20-snap.2310-T1 Valid prediction for GlimmerHMM_glimmerT_47915-T1 Valid prediction for GlimmerHMM_glimmerT_47913-T1 Valid prediction for snap_scaffold_20-snap.2290-T1 Valid prediction for snap_scaffold_20-snap.2305-T1 Valid prediction for snap_scaffold_20-snap.2306-T1 Valid prediction for Augustus_model.g31983.t1 Valid prediction for GeneMark_model.83509_t Valid prediction for snap_scaffold_20-snap.2307-T1 Valid prediction for GeneMark_model.83493_t Valid prediction for snap_scaffold_20-snap.2262-T1 Couldn't classify 257921, 258000 Couldn't classify 270790, 271050 Sorry, prediction pasa_asmbl_26140.p1 fails validation. (CAG) AG 257921-258000 GT AGG (CGA) AG 260842-261503 GT AGG (ATC) AG 264384-264465 GT AGG (GTT) AG 264640-264762 GT CGG (AGT) AG 264939-265042 GT AGG (GCA) AG 265511-265733 GT AGG (GGC) AG 268367-268486 GT AAG (GTG) AG 268801-268963 GT AGG (CAA) AG 269311-269428 GT TGG (GGA) AG 270013-270185 GT GAG (AAG) AG 270374-270490 GT TTG (GCC) AG 270790-271050 CC GCC -recovered pasa_asmbl_26140.p1, internal, 257921, 258000 -recovered pasa_asmbl_26140.p1, internal, 260842, 261503 -recovered pasa_asmbl_26140.p1, internal, 264384, 264465 -recovered pasa_asmbl_26140.p1, internal, 264640, 264762 -recovered pasa_asmbl_26140.p1, internal, 264939, 265042 -recovered pasa_asmbl_26140.p1, internal, 265511, 265733 -recovered pasa_asmbl_26140.p1, internal, 268367, 268486 -recovered pasa_asmbl_26140.p1, internal, 268801, 268963 -recovered pasa_asmbl_26140.p1, internal, 269311, 269428 -recovered pasa_asmbl_26140.p1, internal, 270013, 270185 -recovered pasa_asmbl_26140.p1, internal, 270374, 270490 Valid prediction for Augustus_model.g31970.t1 Valid prediction for snap_scaffold_20-snap.2299-T1 Valid prediction for GeneMark_model.83536_t Valid prediction for snap_scaffold_20-snap.2268-T1 Valid prediction for Augustus_model.g31969.t1 Valid prediction for snap_scaffold_20-snap.2294-T1 Valid prediction for CodingQuarry_transcript_30587-T1 Valid prediction for snap_scaffold_20-snap.2269-T1 Valid prediction for snap_scaffold_20-snap.2263-T1 Valid prediction for GeneMark_model.83524_t Valid prediction for snap_scaffold_20-snap.2283-T1 Valid prediction for snap_scaffold_20-snap.2316-T1 Valid prediction for snap_scaffold_20-snap.2302-T1 Valid prediction for Augustus_model.g31994.t1 Valid prediction for GeneMark_model.83522_t Couldn't classify 10937, 10974 Sorry, prediction pasa_asmbl_26123.p2 fails validation. (AGT) CG 10937-10974 GT AGG (GAG) AG 11617-11959 AC GAA -recovered pasa_asmbl_26123.p2, terminal, 11617, 11959 Valid prediction for snap_scaffold_20-snap.2311-T1 Valid prediction for HiQ_model.g31987.t1 Valid prediction for Augustus_model.g31972.t1 Valid prediction for snap_scaffold_20-snap.2298-T1 Valid prediction for CodingQuarry_transcript_30590-T1 Valid prediction for snap_scaffold_20-snap.2291-T1 Valid prediction for snap_scaffold_20-snap.2309-T1 Valid prediction for pasa_asmbl_26132.p1 Valid prediction for GeneMark_model.83534_t Valid prediction for GlimmerHMM_glimmerT_47907-T1 Valid prediction for GeneMark_model.83518_t Valid prediction for snap_scaffold_20-snap.2270-T1 Valid prediction for snap_scaffold_20-snap.2289-T1 Valid prediction for snap_scaffold_20-snap.2318-T1 Valid prediction for CodingQuarry_transcript_30592-T1 Valid prediction for snap_scaffold_20-snap.2315-T1 Valid prediction for snap_scaffold_20-snap.2296-T1 Valid prediction for GlimmerHMM_glimmerT_47919-T1 Valid prediction for Augustus_model.g31981.t1 Valid prediction for CodingQuarry_transcript_30586-T1 Valid prediction for snap_scaffold_20-snap.2312-T1 Valid prediction for snap_scaffold_20-snap.2314-T1 Valid prediction for GeneMark_model.83529_t Valid prediction for snap_scaffold_20-snap.2303-T1 Valid prediction for snap_scaffold_20-snap.2271-T1 Valid prediction for GeneMark_model.83523_t Valid prediction for snap_scaffold_20-snap.2300-T1 Couldn't classify 272711, 272746 Sorry, prediction pasa_asmbl_26141.p1 fails validation. (CCT) GG 272711-272746 GT AGG (ATG) AG 272996-273565 GA AAG -recovered pasa_asmbl_26141.p1, terminal, 272996, 273565 Valid prediction for snap_scaffold_20-snap.2297-T1 Valid prediction for pasa_asmbl_26147.p1 Valid prediction for Augustus_model.g31990.t1 Valid prediction for GeneMark_model.83537_t Valid prediction for GlimmerHMM_glimmerT_47908-T1 Valid prediction for Augustus_model.g31992.t1 Valid prediction for GlimmerHMM_glimmerT_47912-T1 Valid prediction for Augustus_model.g31982.t1 Valid prediction for snap_scaffold_20-snap.2261-T1 Valid prediction for GlimmerHMM_glimmerT_47897-T1 Valid prediction for GeneMark_model.83532_t Valid prediction for GeneMark_model.83521_t Couldn't classify 212890, 212981 Couldn't classify 219773, 219877 Sorry, prediction pasa_asmbl_26127.p1 fails validation. (GGG) CA 212890-212981 GT AGG (GAG) AG 213630-213694 GT CGG (TGA) AG 215297-215352 GT AGG (GGG) AG 215696-215743 GT AGG (GGA) AG 216566-216608 GT AGG (CTG) AG 217354-217426 GT TGG (GAT) AG 217864-217995 GT AGG (GGC) AG 218421-218483 GT TGG (GAC) AG 219125-219206 GT AGG (CAT) AG 219773-219877 GA AGG add_exon() Sorry, pasa_asmbl_26127.p1 216566-216608-terminal-3 is invalid. -recovered pasa_asmbl_26127.p1, terminal, 216566, 216608 -recovered pasa_asmbl_26127.p1, internal, 213630, 213694 -recovered pasa_asmbl_26127.p1, internal, 215297, 215352 -recovered pasa_asmbl_26127.p1, internal, 215696, 215743 -recovered pasa_asmbl_26127.p1, internal, 216566, 216608 -recovered pasa_asmbl_26127.p1, internal, 217354, 217426 -recovered pasa_asmbl_26127.p1, internal, 217864, 217995 -recovered pasa_asmbl_26127.p1, internal, 218421, 218483 -recovered pasa_asmbl_26127.p1, internal, 219125, 219206 Valid prediction for GlimmerHMM_glimmerT_47900-T1 Valid prediction for Augustus_model.g31986.t1 Valid prediction for snap_scaffold_20-snap.2317-T1 Valid prediction for GeneMark_model.83515_t Valid prediction for GeneMark_model.83516_t Valid prediction for HiQ_model.g31993.t1 Valid prediction for CodingQuarry_transcript_30591-T1 Valid prediction for GeneMark_model.83517_t Valid prediction for GlimmerHMM_glimmerT_47901-T1 Valid prediction for GeneMark_model.83533_t Valid prediction for Augustus_model.g31988.t1 Valid prediction for GlimmerHMM_glimmerT_47920-T1 Valid prediction for GeneMark_model.83510_t Valid prediction for snap_scaffold_20-snap.2272-T1 Valid prediction for GlimmerHMM_glimmerT_47910-T1 Valid prediction for GeneMark_model.83527_t Valid prediction for GeneMark_model.83498_t Valid prediction for GlimmerHMM_glimmerT_47903-T1 Valid prediction for GlimmerHMM_glimmerT_47918-T1 Valid prediction for GeneMark_model.83499_t Valid prediction for snap_scaffold_20-snap.2304-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_20-snap.2279-T1 Valid prediction for GeneMark_model.83526_t Valid prediction for Augustus_model.g31985.t1 Valid prediction for GeneMark_model.83512_t Valid prediction for Augustus_model.g31979.t1 Valid prediction for pasa_asmbl_27027.p1 Valid prediction for GeneMark_model.83507_t Valid prediction for snap_scaffold_20-snap.2277-T1 Valid prediction for GlimmerHMM_glimmerT_47914-T1 Valid prediction for Augustus_model.g31977.t1 Valid prediction for pasa_asmbl_27047.p1 Valid prediction for GlimmerHMM_glimmerT_47902-T1 Valid prediction for Augustus_model.g31966.t1 Valid prediction for snap_scaffold_20-snap.2287-T1 Valid prediction for Augustus_model.g31976.t1 Valid prediction for GeneMark_model.83500_t Valid prediction for snap_scaffold_20-snap.2266-T1 Valid prediction for GeneMark_model.83504_t Valid prediction for snap_scaffold_20-snap.2285-T1 Valid prediction for CodingQuarry_transcript_30594-T1 Valid prediction for GeneMark_model.83542_t Valid prediction for snap_scaffold_20-snap.2278-T1 Valid prediction for snap_scaffold_20-snap.2292-T1 Valid prediction for GeneMark_model.83506_t Valid prediction for snap_scaffold_20-snap.2284-T1 Valid prediction for GlimmerHMM_glimmerT_47906-T1 Valid prediction for GeneMark_model.83528_t Valid prediction for GeneMark_model.83538_t Valid prediction for pasa_asmbl_27024.p1 Valid prediction for snap_scaffold_20-snap.2267-T1 Valid prediction for GeneMark_model.83520_t Valid prediction for snap_scaffold_20-snap.2286-T1 Valid prediction for GeneMark_model.83540_t Valid prediction for Augustus_model.g31975.t1 Valid prediction for HiQ_model.g31996.t1 Valid prediction for GeneMark_model.83508_t Valid prediction for GeneMark_model.83514_t Valid prediction for HiQ_model.g31967.t1 Valid prediction for GeneMark_model.83495_t Valid prediction for Augustus_model.g31971.t1 Valid prediction for HiQ_model.g31995.t1 Valid prediction for CodingQuarry_transcript_30582-T1 Valid prediction for snap_scaffold_20-snap.2275-T1 Valid prediction for snap_scaffold_20-snap.2265-T1 Valid prediction for Augustus_model.g31997.t1 Couldn't classify 260638, 260718 Sorry, prediction pasa_asmbl_27037.p1 fails validation. (ATG) CT 259638-259745 GT ATG (GAT) AG 260165-260247 GT AGG (GCT) AG 260385-260499 GT GGG (GTG) AG 260638-260718 AA AAA -recovered pasa_asmbl_27037.p1, initial, 259638, 259745 -recovered pasa_asmbl_27037.p1, internal, 260165, 260247 -recovered pasa_asmbl_27037.p1, internal, 260385, 260499 Valid prediction for snap_scaffold_20-snap.2321-T1 Valid prediction for snap_scaffold_20-snap.2281-T1 Valid prediction for pasa_asmbl_27040.p1 Valid prediction for GlimmerHMM_glimmerT_47899-T1 Valid prediction for Augustus_model.g31974.t1 Valid prediction for CodingQuarry_transcript_30593-T1 Valid prediction for GlimmerHMM_glimmerT_47904-T1 Couldn't classify 261788, 261837 Couldn't classify 267484, 267703 Couldn't classify 268029, 268119 Sorry, prediction pasa_asmbl_27036.p1 fails validation. (TTC) TG 261788-261837 GT AGG (GGA) AG 262473-262574 GT ATG (GAT) AG 262784-262910 GT AGG (GAA) AG 263100-263304 GT AGG (GCA) AG 263574-263718 GT CGG (GGT) AG 264872-265057 GT TGG (GTT) AG 265238-265302 GT ATG (CTG) AG 265962-266049 GT AGG (GTT) AG 266192-266261 GT TTG (GTT) AG 267484-267703 AT TGA (TGT) AC 268029-268119 GT AAG (TAT) AG 268300-268413 GT CAG (GGA) AG 268737-268849 GT GAG (GAT) AG 269177-269310 CA AGC add_exon() Sorry, pasa_asmbl_27036.p1 263100-263304-terminal-3 is invalid. -recovered pasa_asmbl_27036.p1, terminal, 263100, 263304 -recovered pasa_asmbl_27036.p1, terminal, 269177, 269310 -recovered pasa_asmbl_27036.p1, internal, 262473, 262574 -recovered pasa_asmbl_27036.p1, internal, 262784, 262910 -recovered pasa_asmbl_27036.p1, internal, 263100, 263304 -recovered pasa_asmbl_27036.p1, internal, 263574, 263718 -recovered pasa_asmbl_27036.p1, internal, 264872, 265057 -recovered pasa_asmbl_27036.p1, internal, 265238, 265302 -recovered pasa_asmbl_27036.p1, internal, 265962, 266049 -recovered pasa_asmbl_27036.p1, internal, 266192, 266261 -recovered pasa_asmbl_27036.p1, internal, 268300, 268413 -recovered pasa_asmbl_27036.p1, internal, 268737, 268849 Valid prediction for GlimmerHMM_glimmerT_47898-T1 Couldn't classify 308318, 309388 Sorry, prediction pasa_asmbl_27032.p1 fails validation. (GAA) CA 308318-309388 GT AGG (AGG) AG 309660-309829 GT CGG (ACT) AG 309960-310043 GT AGG (ATG) AG 310211-310316 GT TGG (AGA) AG 310718-310854 GT AGG (TAG) AG 313823-313931 GT AGG (GTG) AG 314371-314573 GT AGG (CAT) AG 314953-315139 GT CAG (GGC) AG 315333-315409 GT TGG (TTT) AG 315680-315812 GT AGG (ATC) AG 316484-316689 GT AGG (TGT) AG 316808-316869 GT GGG (TGT) AG 316964-317072 GT AGG (GGT) AG 318297-318413 GT AGG (GTT) AG 318512-318589 GT AAG (ATT) AG 318759-318898 GT TGG (GTC) AG 319537-319673 CC AAC add_exon() Sorry, pasa_asmbl_27032.p1 310211-310316-initial-1 is invalid. -recovered pasa_asmbl_27032.p1, initial, 310211, 310316 -recovered pasa_asmbl_27032.p1, terminal, 319537, 319673 -recovered pasa_asmbl_27032.p1, internal, 309660, 309829 -recovered pasa_asmbl_27032.p1, internal, 309960, 310043 -recovered pasa_asmbl_27032.p1, internal, 310211, 310316 -recovered pasa_asmbl_27032.p1, internal, 310718, 310854 -recovered pasa_asmbl_27032.p1, internal, 313823, 313931 -recovered pasa_asmbl_27032.p1, internal, 314371, 314573 -recovered pasa_asmbl_27032.p1, internal, 314953, 315139 -recovered pasa_asmbl_27032.p1, internal, 315333, 315409 -recovered pasa_asmbl_27032.p1, internal, 315680, 315812 -recovered pasa_asmbl_27032.p1, internal, 316484, 316689 -recovered pasa_asmbl_27032.p1, internal, 316808, 316869 -recovered pasa_asmbl_27032.p1, internal, 316964, 317072 -recovered pasa_asmbl_27032.p1, internal, 318297, 318413 -recovered pasa_asmbl_27032.p1, internal, 318512, 318589 -recovered pasa_asmbl_27032.p1, internal, 318759, 318898 Valid prediction for pasa_asmbl_27041.p1 Valid prediction for snap_scaffold_20-snap.2322-T1 Valid prediction for snap_scaffold_20-snap.2276-T1 Valid prediction for GeneMark_model.83525_t Valid prediction for snap_scaffold_20-snap.2288-T1 Valid prediction for snap_scaffold_20-snap.2280-T1 Valid prediction for snap_scaffold_20-snap.2320-T1 Valid prediction for GlimmerHMM_glimmerT_47905-T1 Valid prediction for CodingQuarry_transcript_30583-T1 Valid prediction for Augustus_model.g31973.t1 Couldn't classify 24461, 24715 Sorry, prediction pasa_asmbl_27046.p1 fails validation. (ATG) GA 21991-22431 GT AGG (GCG) AG 24461-24715 AC GCA -recovered pasa_asmbl_27046.p1, initial, 21991, 22431 Valid prediction for GeneMark_model.83501_t Valid prediction for GeneMark_model.83511_t Valid prediction for GlimmerHMM_glimmerT_47923-T1 Valid prediction for snap_scaffold_20-snap.2324-T1 Valid prediction for GlimmerHMM_glimmerT_47909-T1 Valid prediction for GeneMark_model.83541_t Valid prediction for snap_scaffold_20-snap.2293-T1 Valid prediction for snap_scaffold_20-snap.2274-T1 Valid prediction for snap_scaffold_20-snap.2295-T1 Valid prediction for HiQ_model.g31965.t1 Valid prediction for snap_scaffold_20-snap.2323-T1 Valid prediction for Augustus_model.g31980.t1 Valid prediction for snap_scaffold_20-snap.2264-T1 Valid prediction for GlimmerHMM_glimmerT_47922-T1 Valid prediction for Augustus_model.g31978.t1 Valid prediction for Augustus_model.g31991.t1 Valid prediction for snap_scaffold_20-snap.2273-T1 Valid prediction for GlimmerHMM_glimmerT_47916-T1 Valid prediction for snap_scaffold_20-snap.2301-T1 Valid prediction for snap_scaffold_20-snap.2282-T1 Valid prediction for GeneMark_model.83535_t Valid prediction for HiQ_model.g31989.t1 Valid prediction for Augustus_model.g31998.t1 Valid prediction for GeneMark_model.83496_t Valid prediction for CodingQuarry_transcript_30584-T1 Valid prediction for snap_scaffold_20-snap.2313-T1 Valid prediction for snap_scaffold_20-snap.2308-T1 Valid prediction for Augustus_model.g31984.t1 Valid prediction for GlimmerHMM_glimmerT_47911-T1 Valid prediction for GeneMark_model.83531_t Couldn't classify 257150, 258148 Sorry, prediction pasa_asmbl_27039.p1 fails validation. (ATG) AA 257150-258148 AA GCA Valid prediction for GeneMark_model.83494_t Valid prediction for GeneMark_model.83539_t Valid prediction for GeneMark_model.83502_t Valid prediction for GeneMark_model.83519_t Couldn't classify 28830, 29088 Sorry, prediction pasa_asmbl_27044.p1 fails validation. (GAC) AG 28830-29088 GT CGG (GTG) AG 30032-30190 GT AGG (GAG) AG 31415-31525 GT AGG (TGA) AG 32178-32354 GT CGG (GTG) AG 32735-32790 GT CGG (ATG) AG 33093-33182 CC GAC -recovered pasa_asmbl_27044.p1, terminal, 33093, 33182 -recovered pasa_asmbl_27044.p1, internal, 28830, 29088 -recovered pasa_asmbl_27044.p1, internal, 30032, 30190 -recovered pasa_asmbl_27044.p1, internal, 31415, 31525 -recovered pasa_asmbl_27044.p1, internal, 32178, 32354 -recovered pasa_asmbl_27044.p1, internal, 32735, 32790 Valid prediction for GlimmerHMM_glimmerT_47921-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 215374, rend_intergenic: 212589 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 312673, rend_intergenic: 311054 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 393031 -exon list size: 690 building trellis 0.1 0.3 0.4 0.6 0.7 0.9 1.0 1.2 1.3 1.4 1.6 1.7 1.9 2.0 2.2 2.3 2.5 2.6 2.7 2.9 3.0 3.2 3.3 3.5 3.6 3.8 3.9 4.0 4.2 4.3 4.5 4.6 4.8 4.9 5.1 5.2 5.3 5.5 5.6 5.8 5.9 6.1 6.2 6.4 6.5 6.6 6.8 6.9 7.1 7.2 7.4 7.5 7.7 7.8 7.9 8.1 8.2 8.4 8.5 8.7 8.8 9.0 9.1 9.2 9.4 9.5 9.7 9.8 10.0 10.1 10.3 10.4 10.5 10.7 10.8 11.0 11.1 11.3 11.4 11.6 11.7 11.8 12.0 12.1 12.3 12.4 12.6 12.7 12.9 13.0 13.2 13.3 13.4 13.6 13.7 13.9 14.0 14.2 14.3 14.5 14.6 14.7 14.9 15.0 15.2 15.3 15.5 15.6 15.8 15.9 16.0 16.2 16.3 16.5 16.6 16.8 16.9 17.1 17.2 17.3 17.5 17.6 17.8 17.9 18.1 18.2 18.4 18.5 18.6 18.8 18.9 19.1 19.2 19.4 19.5 19.7 19.8 19.9 20.1 20.2 20.4 20.5 20.7 20.8 21.0 21.1 21.2 21.4 21.5 21.7 21.8 22.0 22.1 22.3 22.4 22.5 22.7 22.8 23.0 23.1 23.3 23.4 23.6 23.7 23.8 24.0 24.1 24.3 24.4 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.6 25.7 25.9 26.0 26.2 26.3 26.4 26.6 26.7 26.9 27.0 27.2 27.3 27.5 27.6 27.7 27.9 28.0 28.2 28.3 28.5 28.6 28.8 28.9 29.0 29.2 29.3 29.5 29.6 29.8 29.9 30.1 30.2 30.3 30.5 30.6 30.8 30.9 31.1 31.2 31.4 31.5 31.6 31.8 31.9 32.1 32.2 32.4 32.5 32.7 32.8 32.9 33.1 33.2 33.4 33.5 33.7 33.8 34.0 34.1 34.2 34.4 34.5 34.7 34.8 35.0 35.1 35.3 35.4 35.5 35.7 35.8 36.0 36.1 36.3 36.4 36.6 36.7 36.8 37.0 37.1 37.3 37.4 37.6 37.7 37.9 38.0 38.2 38.3 38.4 38.6 38.7 38.9 39.0 39.2 39.3 39.5 39.6 39.7 39.9 40.0 40.2 40.3 40.5 40.6 40.8 40.9 41.0 41.2 41.3 41.5 41.6 41.8 41.9 42.1 42.2 42.3 42.5 42.6 42.8 42.9 43.1 43.2 43.4 43.5 43.6 43.8 43.9 44.1 44.2 44.4 44.5 44.7 44.8 44.9 45.1 45.2 45.4 45.5 45.7 45.8 46.0 46.1 46.2 46.4 46.5 46.7 46.8 47.0 47.1 47.3 47.4 47.5 47.7 47.8 48.0 48.1 48.3 48.4 48.6 48.7 48.8 49.0 49.1 49.3 49.4 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.6 50.7 50.9 51.0 51.2 51.3 51.4 51.6 51.7 51.9 52.0 52.2 52.3 52.5 52.6 52.7 52.9 53.0 53.2 53.3 53.5 53.6 53.8 53.9 54.0 54.2 54.3 54.5 54.6 54.8 54.9 55.1 55.2 55.3 55.5 55.6 55.8 55.9 56.1 56.2 56.4 56.5 56.6 56.8 56.9 57.1 57.2 57.4 57.5 57.7 57.8 57.9 58.1 58.2 58.4 58.5 58.7 58.8 59.0 59.1 59.2 59.4 59.5 59.7 59.8 60.0 60.1 60.3 60.4 60.5 60.7 60.8 61.0 61.1 61.3 61.4 61.6 61.7 61.8 62.0 62.1 62.3 62.4 62.6 62.7 62.9 63.0 63.2 63.3 63.4 63.6 63.7 63.9 64.0 64.2 64.3 64.5 64.6 64.7 64.9 65.0 65.2 65.3 65.5 65.6 65.8 65.9 66.0 66.2 66.3 66.5 66.6 66.8 66.9 67.1 67.2 67.3 67.5 67.6 67.8 67.9 68.1 68.2 68.4 68.5 68.6 68.8 68.9 69.1 69.2 69.4 69.5 69.7 69.8 69.9 70.1 70.2 70.4 70.5 70.7 70.8 71.0 71.1 71.2 71.4 71.5 71.7 71.8 72.0 72.1 72.3 72.4 72.5 72.7 72.8 73.0 73.1 73.3 73.4 73.6 73.7 73.8 74.0 74.1 74.3 74.4 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.6 75.7 75.9 76.0 76.2 76.3 76.4 76.6 76.7 76.9 77.0 77.2 77.3 77.5 77.6 77.7 77.9 78.0 78.2 78.3 78.5 78.6 78.8 78.9 79.0 79.2 79.3 79.5 79.6 79.8 79.9 80.1 80.2 80.3 80.5 80.6 80.8 80.9 81.1 81.2 81.4 81.5 81.6 81.8 81.9 82.1 82.2 82.4 82.5 82.7 82.8 82.9 83.1 83.2 83.4 83.5 83.7 83.8 84.0 84.1 84.2 84.4 84.5 84.7 84.8 85.0 85.1 85.3 85.4 85.5 85.7 85.8 86.0 86.1 86.3 86.4 86.6 86.7 86.8 87.0 87.1 87.3 87.4 87.6 87.7 87.9 88.0 88.2 88.3 88.4 88.6 88.7 88.9 89.0 89.2 89.3 89.5 89.6 89.7 89.9 90.0 90.2 90.3 90.5 90.6 90.8 90.9 91.0 91.2 91.3 91.5 91.6 91.8 91.9 92.1 92.2 92.3 92.5 92.6 92.8 92.9 93.1 93.2 93.4 93.5 93.6 93.8 93.9 94.1 94.2 94.4 94.5 94.7 94.8 94.9 95.1 95.2 95.4 95.5 95.7 95.8 96.0 96.1 96.2 96.4 96.5 96.7 96.8 97.0 97.1 97.3 97.4 97.5 97.7 97.8 98.0 98.1 98.3 98.4 98.6 98.7 98.8 99.0 99.1 99.3 99.4 99.6 99.7 99.9 -found 41 predictions from path traversal Error with prediction: snap lend_intergenic: 215374, rend_intergenic: 212589 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 312673, rend_intergenic: 311054 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 40 predictions persist after filtering for low support -building DP trellis -building trellis in range 382728 - 393031 -exon list size: 3 building trellis 20.0 40.0 60.0 80.0 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support