-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2/scaffold_2_6195260-6506114 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_2-snap.1438-T1 Valid prediction for snap_scaffold_2-snap.1408-T1 Valid prediction for GeneMark_model.6595_t Valid prediction for snap_scaffold_2-snap.1432-T1 Valid prediction for GlimmerHMM_glimmerT_4018-T1 Valid prediction for GeneMark_model.6564_t Valid prediction for HiQ_model.g2676.t1 Valid prediction for snap_scaffold_2-snap.1416-T1 Valid prediction for GlimmerHMM_glimmerT_4031-T1 Valid prediction for GlimmerHMM_glimmerT_4033-T1 Valid prediction for Augustus_model.g2672.t1 Valid prediction for GeneMark_model.6600_t Valid prediction for GlimmerHMM_glimmerT_4043-T1 Valid prediction for GeneMark_model.6572_t Valid prediction for snap_scaffold_2-snap.1440-T1 Valid prediction for GlimmerHMM_glimmerT_4021-T1 Valid prediction for HiQ_model.g2688.t1 Valid prediction for Augustus_model.g2671.t1 Valid prediction for snap_scaffold_2-snap.1434-T1 Valid prediction for GlimmerHMM_glimmerT_4042-T1 Valid prediction for GlimmerHMM_glimmerT_4034-T1 Valid prediction for GeneMark_model.6586_t Valid prediction for GlimmerHMM_glimmerT_4030-T1 Valid prediction for snap_scaffold_2-snap.1415-T1 Valid prediction for Augustus_model.g2680.t1 Valid prediction for GeneMark_model.6581_t Valid prediction for CodingQuarry_transcript_28516-T1 Valid prediction for GlimmerHMM_glimmerT_4029-T1 Valid prediction for Augustus_model.g2673.t1 Valid prediction for snap_scaffold_2-snap.1411-T1 Valid prediction for snap_scaffold_2-snap.1395-T1 Valid prediction for snap_scaffold_2-snap.1396-T1 Valid prediction for GlimmerHMM_glimmerT_4019-T1 Valid prediction for Augustus_model.g2677.t1 Couldn't classify 159479, 159487 Sorry, prediction pasa_asmbl_24486.p1 fails validation. (TAC) CC 159479-159487 GT GGG (GAC) AG 159617-159835 GT TTG (GAA) AG 160062-160274 GT AGG (GTG) AG 160525-160742 GT AGG (GTC) AG 161865-162033 TT GAT -recovered pasa_asmbl_24486.p1, terminal, 161865, 162033 -recovered pasa_asmbl_24486.p1, internal, 159617, 159835 -recovered pasa_asmbl_24486.p1, internal, 160062, 160274 -recovered pasa_asmbl_24486.p1, internal, 160525, 160742 Couldn't classify 141510, 141583 Couldn't classify 142821, 142832 Sorry, prediction pasa_asmbl_24484.p1 fails validation. (GGC) AA 141510-141583 GT CAG (CGA) AG 141912-141951 GT AGG (CAT) AG 142119-142199 GT AGG (ATG) AG 142541-142648 GT AGG (AAA) AG 142821-142832 CA GGC -recovered pasa_asmbl_24484.p1, initial, 142541, 142648 -recovered pasa_asmbl_24484.p1, internal, 141912, 141951 -recovered pasa_asmbl_24484.p1, internal, 142119, 142199 -recovered pasa_asmbl_24484.p1, internal, 142541, 142648 Couldn't classify 230382, 230491 Couldn't classify 234925, 235061 Sorry, prediction pasa_asmbl_24488.p1 fails validation. (TTG) AT 230382-230491 GT AAG (ACT) AG 231104-231254 GT AGG (GAC) AG 231642-231809 GT AGG (TTG) AG 231946-232008 GT AGG (GAC) AG 232845-232952 GT GGG (ATC) AG 233127-233236 GT ACG (GTG) AG 234341-234462 GT AAG (CCA) AG 234565-234702 GT GAG (GCA) AG 234925-235061 GG ACG add_exon() Sorry, pasa_asmbl_24488.p1 234341-234462-terminal-2 is invalid. -recovered pasa_asmbl_24488.p1, terminal, 234341, 234462 -recovered pasa_asmbl_24488.p1, internal, 231104, 231254 -recovered pasa_asmbl_24488.p1, internal, 231642, 231809 -recovered pasa_asmbl_24488.p1, internal, 231946, 232008 -recovered pasa_asmbl_24488.p1, internal, 232845, 232952 -recovered pasa_asmbl_24488.p1, internal, 233127, 233236 -recovered pasa_asmbl_24488.p1, internal, 234341, 234462 -recovered pasa_asmbl_24488.p1, internal, 234565, 234702 Valid prediction for GeneMark_model.6599_t Valid prediction for GeneMark_model.6576_t Valid prediction for GeneMark_model.6574_t Valid prediction for GlimmerHMM_glimmerT_4017-T1 Valid prediction for GeneMark_model.6561_t Valid prediction for GeneMark_model.6583_t Valid prediction for GeneMark_model.6601_t Valid prediction for snap_scaffold_2-snap.1433-T1 Valid prediction for snap_scaffold_2-snap.1435-T1 Valid prediction for GeneMark_model.6588_t Valid prediction for GeneMark_model.6566_t Valid prediction for GeneMark_model.6570_t Couldn't classify 263473, 263489 Sorry, prediction pasa_asmbl_24492.p1 fails validation. (ATG) TG 250135-250314 GT CGG (CCA) AG 250752-250959 GT ACG (GTT) AG 251237-251327 GT AGG (AAG) AG 251537-251622 GT GGG (AGT) AG 251732-251886 GT AGG (ATA) AG 252175-252276 GT AGG (GTG) AG 252747-252908 GT AGG (CAA) AG 253272-253393 GT GGG (GAA) AG 253865-253966 GT ATG (GAT) AG 254144-254230 GT CTG (GTT) AG 254583-254658 GT AGG (GAA) AG 254764-254873 GT ATG (GTA) AG 256811-256896 GT AGG (ACT) AG 257109-257234 GT AGG (GAG) AG 259155-259276 GT AGG (GGT) AG 259375-259557 GT AGG (TTG) AG 259748-259889 GT AGG (ATC) AG 260339-260562 GT AGG (GAG) AG 260824-260951 GT CTG (GTA) AG 261387-261501 GT ACG (GAG) AG 262032-262139 GT AGG (GAC) AG 262372-262488 GT AGG (AAC) AG 262593-262733 GT AGG (GTC) AG 263006-263108 GT AGG (GAG) AG 263473-263489 CC CGC -recovered pasa_asmbl_24492.p1, initial, 250135, 250314 add_exon() Sorry, pasa_asmbl_24492.p1 251237-251327-terminal-3 is invalid. -recovered pasa_asmbl_24492.p1, terminal, 251237, 251327 -recovered pasa_asmbl_24492.p1, terminal, 263006, 263108 -recovered pasa_asmbl_24492.p1, internal, 250752, 250959 -recovered pasa_asmbl_24492.p1, internal, 251237, 251327 -recovered pasa_asmbl_24492.p1, internal, 251537, 251622 -recovered pasa_asmbl_24492.p1, internal, 251732, 251886 -recovered pasa_asmbl_24492.p1, internal, 252175, 252276 -recovered pasa_asmbl_24492.p1, internal, 252747, 252908 -recovered pasa_asmbl_24492.p1, internal, 253272, 253393 -recovered pasa_asmbl_24492.p1, internal, 253865, 253966 -recovered pasa_asmbl_24492.p1, internal, 254144, 254230 -recovered pasa_asmbl_24492.p1, internal, 254583, 254658 -recovered pasa_asmbl_24492.p1, internal, 254764, 254873 -recovered pasa_asmbl_24492.p1, internal, 256811, 256896 -recovered pasa_asmbl_24492.p1, internal, 257109, 257234 -recovered pasa_asmbl_24492.p1, internal, 259155, 259276 -recovered pasa_asmbl_24492.p1, internal, 259375, 259557 -recovered pasa_asmbl_24492.p1, internal, 259748, 259889 -recovered pasa_asmbl_24492.p1, internal, 260339, 260562 -recovered pasa_asmbl_24492.p1, internal, 260824, 260951 -recovered pasa_asmbl_24492.p1, internal, 261387, 261501 -recovered pasa_asmbl_24492.p1, internal, 262032, 262139 -recovered pasa_asmbl_24492.p1, internal, 262372, 262488 -recovered pasa_asmbl_24492.p1, internal, 262593, 262733 -recovered pasa_asmbl_24492.p1, internal, 263006, 263108 Valid prediction for GeneMark_model.6562_t Couldn't classify 103574, 103876 Sorry, prediction pasa_asmbl_24481.p1 fails validation. (CGC) GC 103574-103876 GT AGG Couldn't classify 146944, 146949 Sorry, prediction pasa_asmbl_24485.p1 fails validation. (GAC) TT 146944-146949 GT GGG (ACC) AG 147172-147271 GT GAG (AGC) AG 147890-148042 GT AGG (CCA) AG 148478-149916 TG AGT -recovered pasa_asmbl_24485.p1, terminal, 148478, 149916 -recovered pasa_asmbl_24485.p1, internal, 147172, 147271 -recovered pasa_asmbl_24485.p1, internal, 147890, 148042 Valid prediction for snap_scaffold_2-snap.1403-T1 Valid prediction for GlimmerHMM_glimmerT_4035-T1 Valid prediction for pasa_asmbl_24483.p1 Valid prediction for GeneMark_model.6578_t Valid prediction for snap_scaffold_2-snap.1397-T1 Valid prediction for snap_scaffold_2-snap.1409-T1 Valid prediction for GeneMark_model.6567_t Valid prediction for Augustus_model.g2678.t1 Valid prediction for GlimmerHMM_glimmerT_4022-T1 Couldn't classify 239251, 239268 Sorry, prediction pasa_asmbl_24489.p1 fails validation. (ATC) AC 239251-239268 GT AGG (ATG) AG 239655-239720 GT AGG (GTG) AG 239922-240057 GT AGG (ACT) AG 240403-240520 GT AGG (GCA) AG 240798-240972 GT AGG (GAG) AG 241271-241389 GT TTG (TGG) AG 241552-241631 GT CTG (ACC) AG 241871-242021 GT GTG (GGA) AG 242391-242562 TG GAT -recovered pasa_asmbl_24489.p1, initial, 239655, 239720 -recovered pasa_asmbl_24489.p1, terminal, 242391, 242562 -recovered pasa_asmbl_24489.p1, internal, 239655, 239720 -recovered pasa_asmbl_24489.p1, internal, 239922, 240057 -recovered pasa_asmbl_24489.p1, internal, 240403, 240520 -recovered pasa_asmbl_24489.p1, internal, 240798, 240972 -recovered pasa_asmbl_24489.p1, internal, 241271, 241389 -recovered pasa_asmbl_24489.p1, internal, 241552, 241631 -recovered pasa_asmbl_24489.p1, internal, 241871, 242021 Valid prediction for GeneMark_model.6575_t Valid prediction for GlimmerHMM_glimmerT_4044-T1 Valid prediction for GeneMark_model.6585_t Valid prediction for HiQ_model.g2689.t1 Couldn't classify 103934, 104198 Sorry, prediction pasa_asmbl_24482.p1 fails validation. (CTG) GC 103934-104198 GT TGG (GGG) AG 104377-105302 GA AAG -recovered pasa_asmbl_24482.p1, terminal, 104377, 105302 Valid prediction for GlimmerHMM_glimmerT_4027-T1 Valid prediction for GeneMark_model.6582_t Valid prediction for GeneMark_model.6569_t Couldn't classify 268115, 268301 Sorry, prediction pasa_asmbl_24495.p1 fails validation. (GAG) CA 268115-268301 GT CGG (GCT) AG 270480-270617 GT AGG (CTC) AG 270821-270919 GT ATG (ACA) AG 271873-271967 TA AGT -recovered pasa_asmbl_24495.p1, terminal, 271873, 271967 -recovered pasa_asmbl_24495.p1, internal, 270480, 270617 -recovered pasa_asmbl_24495.p1, internal, 270821, 270919 Valid prediction for Augustus_model.g2687.t1 Valid prediction for snap_scaffold_2-snap.1436-T1 Valid prediction for snap_scaffold_2-snap.1437-T1 Valid prediction for snap_scaffold_2-snap.1424-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_4032-T1 Valid prediction for snap_scaffold_2-snap.1414-T1 Valid prediction for pasa_asmbl_23224.p1 Valid prediction for HiQ_model.g2679.t1 Valid prediction for CodingQuarry_transcript_28519-T1 Valid prediction for GeneMark_model.6584_t Valid prediction for snap_scaffold_2-snap.1421-T1 Valid prediction for snap_scaffold_2-snap.1431-T1 Valid prediction for GeneMark_model.6603_t Valid prediction for HiQ_model.g2685.t1 Valid prediction for GeneMark_model.6573_t Valid prediction for Augustus_model.g2686.t1 Valid prediction for GlimmerHMM_glimmerT_4025-T1 Valid prediction for snap_scaffold_2-snap.1406-T1 Valid prediction for GeneMark_model.6563_t Valid prediction for GeneMark_model.6594_t Valid prediction for Augustus_model.g2670.t1 Valid prediction for snap_scaffold_2-snap.1407-T1 Valid prediction for Augustus_model.g2684.t1 Couldn't classify 190113, 190113 Couldn't classify 199139, 199273 Sorry, prediction pasa_asmbl_23218.p1 fails validation. (AGT) AC 190113-190113 GT CAG (TGT) AG 190403-190464 GT AGG (GTA) AG 190581-190808 GT AGG (GAT) AG 191012-191076 GT AGG (GAG) AG 191452-191682 GT CAG (CGG) AG 194446-194565 GT GGG (AGA) AG 195343-195455 GT GAG (GGT) AG 195863-195898 GT CGG (ACA) AG 198208-198254 GT AGG (GAG) AG 199139-199273 GT AGG -recovered pasa_asmbl_23218.p1, internal, 190403, 190464 -recovered pasa_asmbl_23218.p1, internal, 190581, 190808 -recovered pasa_asmbl_23218.p1, internal, 191012, 191076 -recovered pasa_asmbl_23218.p1, internal, 191452, 191682 -recovered pasa_asmbl_23218.p1, internal, 194446, 194565 -recovered pasa_asmbl_23218.p1, internal, 195343, 195455 -recovered pasa_asmbl_23218.p1, internal, 195863, 195898 -recovered pasa_asmbl_23218.p1, internal, 198208, 198254 -recovered pasa_asmbl_23218.p1, internal, 199139, 199273 Valid prediction for snap_scaffold_2-snap.1401-T1 Valid prediction for GlimmerHMM_glimmerT_4040-T1 Couldn't classify 138171, 138310 Sorry, prediction pasa_asmbl_23225.p1 fails validation. (ATG) GG 132058-132135 GT AGG (AAA) AG 132738-132778 GT GGG (TTG) AG 132893-132965 GT CGG (AAT) AG 133619-133669 GT CGG (GGT) AG 133871-134040 GT GAG (GGC) AG 134679-134778 GT AGG (ATT) AG 134930-135081 GT GTG (GAC) AG 135287-135365 GT AGG (GAT) AG 136583-136633 GT AGG (AAC) AG 136803-136925 GT AGG (GAC) AG 137060-137182 GT CTG (AAC) AG 137386-137490 GT GGG (TTT) AG 137676-137784 GT CCG (CGT) AG 138171-138310 CC TGC -recovered pasa_asmbl_23225.p1, initial, 132058, 132135 add_exon() Sorry, pasa_asmbl_23225.p1 133871-134040-terminal-2 is invalid. -recovered pasa_asmbl_23225.p1, terminal, 133871, 134040 -recovered pasa_asmbl_23225.p1, internal, 132738, 132778 -recovered pasa_asmbl_23225.p1, internal, 132893, 132965 -recovered pasa_asmbl_23225.p1, internal, 133619, 133669 -recovered pasa_asmbl_23225.p1, internal, 133871, 134040 -recovered pasa_asmbl_23225.p1, internal, 134679, 134778 -recovered pasa_asmbl_23225.p1, internal, 134930, 135081 -recovered pasa_asmbl_23225.p1, internal, 135287, 135365 -recovered pasa_asmbl_23225.p1, internal, 136583, 136633 -recovered pasa_asmbl_23225.p1, internal, 136803, 136925 -recovered pasa_asmbl_23225.p1, internal, 137060, 137182 -recovered pasa_asmbl_23225.p1, internal, 137386, 137490 -recovered pasa_asmbl_23225.p1, internal, 137676, 137784 Valid prediction for snap_scaffold_2-snap.1404-T1 Valid prediction for snap_scaffold_2-snap.1442-T1 Valid prediction for HiQ_model.g2674.t1 Valid prediction for CodingQuarry_transcript_28517-T1 Valid prediction for snap_scaffold_2-snap.1412-T1 Valid prediction for snap_scaffold_2-snap.1439-T1 Valid prediction for GeneMark_model.6587_t Valid prediction for snap_scaffold_2-snap.1428-T1 Valid prediction for GeneMark_model.6604_t Valid prediction for pasa_asmbl_23228.p1 Valid prediction for snap_scaffold_2-snap.1419-T1 Valid prediction for GeneMark_model.6568_t Valid prediction for snap_scaffold_2-snap.1425-T1 Valid prediction for GeneMark_model.6577_t Valid prediction for GeneMark_model.6580_t Valid prediction for GlimmerHMM_glimmerT_4024-T1 Valid prediction for snap_scaffold_2-snap.1423-T1 Valid prediction for snap_scaffold_2-snap.1413-T1 Valid prediction for snap_scaffold_2-snap.1417-T1 Valid prediction for snap_scaffold_2-snap.1420-T1 Valid prediction for GeneMark_model.6602_t Valid prediction for snap_scaffold_2-snap.1418-T1 Valid prediction for GeneMark_model.6589_t Valid prediction for GlimmerHMM_glimmerT_4039-T1 Valid prediction for GeneMark_model.6593_t Valid prediction for Augustus_model.g2683.t1 Valid prediction for GeneMark_model.6590_t Valid prediction for CodingQuarry_transcript_28520-T1 Valid prediction for snap_scaffold_2-snap.1422-T1 Valid prediction for GlimmerHMM_glimmerT_4037-T1 Valid prediction for CodingQuarry_transcript_28515-T1 Valid prediction for snap_scaffold_2-snap.1400-T1 Valid prediction for snap_scaffold_2-snap.1441-T1 Valid prediction for snap_scaffold_2-snap.1402-T1 Valid prediction for Augustus_model.g2675.t1 Valid prediction for snap_scaffold_2-snap.1410-T1 Valid prediction for GeneMark_model.6592_t Valid prediction for GeneMark_model.6571_t Couldn't classify 91205, 91368 Sorry, prediction pasa_asmbl_23229.p1 fails validation. (ATG) AC 89696-89819 GT AGG (GAA) AG 90099-90260 GT TGG (GCC) AG 91205-91368 CC CAC -recovered pasa_asmbl_23229.p1, initial, 89696, 89819 -recovered pasa_asmbl_23229.p1, internal, 90099, 90260 Valid prediction for GeneMark_model.6579_t Valid prediction for GlimmerHMM_glimmerT_4036-T1 Valid prediction for GlimmerHMM_glimmerT_4045-T1 Valid prediction for snap_scaffold_2-snap.1399-T1 Valid prediction for GlimmerHMM_glimmerT_4038-T1 Valid prediction for snap_scaffold_2-snap.1398-T1 Valid prediction for CodingQuarry_transcript_28518-T1 Valid prediction for snap_scaffold_2-snap.1429-T1 Valid prediction for snap_scaffold_2-snap.1426-T1 Couldn't classify 127248, 127350 Sorry, prediction pasa_asmbl_23227.p2 fails validation. (CCG) CA 127248-127350 GT ATG (TGC) AG 127458-127505 GC AGG (AAA) AG 127621-127665 GT GGG (TGT) AG 127942-128057 CC GAC -recovered pasa_asmbl_23227.p2, terminal, 127942, 128057 -recovered pasa_asmbl_23227.p2, internal, 127458, 127505 -recovered pasa_asmbl_23227.p2, internal, 127621, 127665 Valid prediction for GlimmerHMM_glimmerT_4041-T1 Valid prediction for GeneMark_model.6598_t Valid prediction for GlimmerHMM_glimmerT_4023-T1 Valid prediction for HiQ_model.g2681.t1 Valid prediction for GeneMark_model.6596_t Valid prediction for GeneMark_model.6597_t Valid prediction for GlimmerHMM_glimmerT_4020-T1 Valid prediction for HiQ_model.g2682.t1 Valid prediction for GeneMark_model.6591_t Valid prediction for GeneMark_model.6565_t Valid prediction for snap_scaffold_2-snap.1405-T1 Valid prediction for GlimmerHMM_glimmerT_4026-T1 Valid prediction for GlimmerHMM_glimmerT_4028-T1 Couldn't classify 89497, 89533 Sorry, prediction pasa_asmbl_23230.p1 fails validation. (ATG) AG 87391-87516 GT AGG (TCA) AG 88471-88619 GT ATG (GGC) AG 89225-89350 GT AGG (TAT) AG 89497-89533 AC GGA -recovered pasa_asmbl_23230.p1, initial, 87391, 87516 -recovered pasa_asmbl_23230.p1, internal, 87391, 87516 -recovered pasa_asmbl_23230.p1, internal, 88471, 88619 -recovered pasa_asmbl_23230.p1, internal, 89225, 89350 Valid prediction for snap_scaffold_2-snap.1430-T1 Valid prediction for snap_scaffold_2-snap.1394-T1 Valid prediction for snap_scaffold_2-snap.1427-T1 Valid prediction for Augustus_model.g2690.t1 Valid prediction for pasa_asmbl_23220.p1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 18989, rend_intergenic: 16144 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149916, rend_intergenic: 137170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201781, rend_intergenic: 194913 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281887, rend_intergenic: 279956 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 290009, rend_intergenic: 282355 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 310855 -exon list size: 686 building trellis 0.1 0.3 0.4 0.6 0.7 0.9 1.0 1.2 1.3 1.5 1.6 1.7 1.9 2.0 2.2 2.3 2.5 2.6 2.8 2.9 3.1 3.2 3.3 3.5 3.6 3.8 3.9 4.1 4.2 4.4 4.5 4.7 4.8 4.9 5.1 5.2 5.4 5.5 5.7 5.8 6.0 6.1 6.2 6.4 6.5 6.7 6.8 7.0 7.1 7.3 7.4 7.6 7.7 7.8 8.0 8.1 8.3 8.4 8.6 8.7 8.9 9.0 9.2 9.3 9.4 9.6 9.7 9.9 10.0 10.2 10.3 10.5 10.6 10.8 10.9 11.0 11.2 11.3 11.5 11.6 11.8 11.9 12.1 12.2 12.4 12.5 12.6 12.8 12.9 13.1 13.2 13.4 13.5 13.7 13.8 14.0 14.1 14.2 14.4 14.5 14.7 14.8 15.0 15.1 15.3 15.4 15.6 15.7 15.8 16.0 16.1 16.3 16.4 16.6 16.7 16.9 17.0 17.2 17.3 17.4 17.6 17.7 17.9 18.0 18.2 18.3 18.5 18.6 18.8 18.9 19.0 19.2 19.3 19.5 19.6 19.8 19.9 20.1 20.2 20.3 20.5 20.6 20.8 20.9 21.1 21.2 21.4 21.5 21.7 21.8 21.9 22.1 22.2 22.4 22.5 22.7 22.8 23.0 23.1 23.3 23.4 23.5 23.7 23.8 24.0 24.1 24.3 24.4 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.6 25.7 25.9 26.0 26.2 26.3 26.5 26.6 26.7 26.9 27.0 27.2 27.3 27.5 27.6 27.8 27.9 28.1 28.2 28.3 28.5 28.6 28.8 28.9 29.1 29.2 29.4 29.5 29.7 29.8 29.9 30.1 30.2 30.4 30.5 30.7 30.8 31.0 31.1 31.2 31.4 31.5 31.7 31.8 32.0 32.1 32.3 32.4 32.6 32.7 32.8 33.0 33.1 33.3 33.4 33.6 33.7 33.9 34.0 34.2 34.3 34.4 34.6 34.7 34.9 35.0 35.2 35.3 35.5 35.6 35.8 35.9 36.0 36.2 36.3 36.5 36.6 36.8 36.9 37.1 37.2 37.4 37.5 37.6 37.8 37.9 38.1 38.2 38.4 38.5 38.7 38.8 39.0 39.1 39.2 39.4 39.5 39.7 39.8 40.0 40.1 40.3 40.4 40.6 40.7 40.8 41.0 41.1 41.3 41.4 41.6 41.7 41.9 42.0 42.2 42.3 42.4 42.6 42.7 42.9 43.0 43.2 43.3 43.5 43.6 43.8 43.9 44.0 44.2 44.3 44.5 44.6 44.8 44.9 45.1 45.2 45.3 45.5 45.6 45.8 45.9 46.1 46.2 46.4 46.5 46.7 46.8 46.9 47.1 47.2 47.4 47.5 47.7 47.8 48.0 48.1 48.3 48.4 48.5 48.7 48.8 49.0 49.1 49.3 49.4 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.6 50.7 50.9 51.0 51.2 51.3 51.5 51.6 51.7 51.9 52.0 52.2 52.3 52.5 52.6 52.8 52.9 53.1 53.2 53.3 53.5 53.6 53.8 53.9 54.1 54.2 54.4 54.5 54.7 54.8 54.9 55.1 55.2 55.4 55.5 55.7 55.8 56.0 56.1 56.2 56.4 56.5 56.7 56.8 57.0 57.1 57.3 57.4 57.6 57.7 57.8 58.0 58.1 58.3 58.4 58.6 58.7 58.9 59.0 59.2 59.3 59.4 59.6 59.7 59.9 60.0 60.2 60.3 60.5 60.6 60.8 60.9 61.0 61.2 61.3 61.5 61.6 61.8 61.9 62.1 62.2 62.4 62.5 62.6 62.8 62.9 63.1 63.2 63.4 63.5 63.7 63.8 64.0 64.1 64.2 64.4 64.5 64.7 64.8 65.0 65.1 65.3 65.4 65.6 65.7 65.8 66.0 66.1 66.3 66.4 66.6 66.7 66.9 67.0 67.2 67.3 67.4 67.6 67.7 67.9 68.0 68.2 68.3 68.5 68.6 68.8 68.9 69.0 69.2 69.3 69.5 69.6 69.8 69.9 70.1 70.2 70.3 70.5 70.6 70.8 70.9 71.1 71.2 71.4 71.5 71.7 71.8 71.9 72.1 72.2 72.4 72.5 72.7 72.8 73.0 73.1 73.3 73.4 73.5 73.7 73.8 74.0 74.1 74.3 74.4 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.6 75.7 75.9 76.0 76.2 76.3 76.5 76.6 76.7 76.9 77.0 77.2 77.3 77.5 77.6 77.8 77.9 78.1 78.2 78.3 78.5 78.6 78.8 78.9 79.1 79.2 79.4 79.5 79.7 79.8 79.9 80.1 80.2 80.4 80.5 80.7 80.8 81.0 81.1 81.2 81.4 81.5 81.7 81.8 82.0 82.1 82.3 82.4 82.6 82.7 82.8 83.0 83.1 83.3 83.4 83.6 83.7 83.9 84.0 84.2 84.3 84.4 84.6 84.7 84.9 85.0 85.2 85.3 85.5 85.6 85.8 85.9 86.0 86.2 86.3 86.5 86.6 86.8 86.9 87.1 87.2 87.4 87.5 87.6 87.8 87.9 88.1 88.2 88.4 88.5 88.7 88.8 89.0 89.1 89.2 89.4 89.5 89.7 89.8 90.0 90.1 90.3 90.4 90.6 90.7 90.8 91.0 91.1 91.3 91.4 91.6 91.7 91.9 92.0 92.2 92.3 92.4 92.6 92.7 92.9 93.0 93.2 93.3 93.5 93.6 93.8 93.9 94.0 94.2 94.3 94.5 94.6 94.8 94.9 95.1 95.2 95.3 95.5 95.6 95.8 95.9 96.1 96.2 96.4 96.5 96.7 96.8 96.9 97.1 97.2 97.4 97.5 97.7 97.8 98.0 98.1 98.3 98.4 98.5 98.7 98.8 99.0 99.1 99.3 99.4 99.6 99.7 99.9 -found 37 predictions from path traversal Error with prediction: snap lend_intergenic: 18989, rend_intergenic: 16144 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149916, rend_intergenic: 137170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201781, rend_intergenic: 194913 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281887, rend_intergenic: 279956 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 290009, rend_intergenic: 282355 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 11871 -exon list size: 3 building trellis 20.0 40.0 60.0 80.0 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -no exons in range 1 - 11250