-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2/scaffold_2_581345-821129 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_3151-T1 Valid prediction for Augustus_model.g2141.t1 Valid prediction for snap_scaffold_2-snap.165-T1 Valid prediction for CodingQuarry_transcript_28373-T1 Valid prediction for GeneMark_model.5105_t Valid prediction for snap_scaffold_2-snap.179-T1 Valid prediction for GeneMark_model.5095_t Valid prediction for snap_scaffold_2-snap.131-T1 Valid prediction for GeneMark_model.5091_t Valid prediction for GlimmerHMM_glimmerT_3152-T1 Valid prediction for GeneMark_model.5104_t Valid prediction for snap_scaffold_2-snap.141-T1 Valid prediction for GlimmerHMM_glimmerT_3153-T1 Valid prediction for snap_scaffold_2-snap.153-T1 Valid prediction for GeneMark_model.5097_t Valid prediction for GeneMark_model.5077_t Valid prediction for GlimmerHMM_glimmerT_3145-T1 Valid prediction for snap_scaffold_2-snap.132-T1 Valid prediction for snap_scaffold_2-snap.139-T1 Valid prediction for snap_scaffold_2-snap.164-T1 Valid prediction for GlimmerHMM_glimmerT_3149-T1 Valid prediction for Augustus_model.g2140.t1 Valid prediction for GeneMark_model.5089_t Valid prediction for GeneMark_model.5106_t Valid prediction for GeneMark_model.5082_t Valid prediction for Augustus_model.g2142.t1 Valid prediction for GeneMark_model.5100_t Valid prediction for GeneMark_model.5130_t Valid prediction for GeneMark_model.5115_t Couldn't classify 93852, 94001 Couldn't classify 95532, 95765 Sorry, prediction pasa_asmbl_24110.p1 fails validation. (ATC) AC 93852-94001 GT ATG (GGA) AG 94846-95018 GT AGG (GTT) AG 95131-95197 GT AGG (AAT) AG 95532-95765 CG AGC -recovered pasa_asmbl_24110.p1, internal, 94846, 95018 -recovered pasa_asmbl_24110.p1, internal, 95131, 95197 Valid prediction for snap_scaffold_2-snap.176-T1 Valid prediction for Augustus_model.g2146.t1 Valid prediction for GlimmerHMM_glimmerT_3133-T1 Valid prediction for GeneMark_model.5124_t Valid prediction for GlimmerHMM_glimmerT_3163-T1 Valid prediction for Augustus_model.g2145.t1 Valid prediction for GlimmerHMM_glimmerT_3161-T1 Valid prediction for HiQ_model.g2125.t1 Valid prediction for GeneMark_model.5126_t Valid prediction for HiQ_model.g2122.t1 Valid prediction for GeneMark_model.5135_t Valid prediction for snap_scaffold_2-snap.182-T1 Valid prediction for GlimmerHMM_glimmerT_3138-T1 Valid prediction for GeneMark_model.5075_t Valid prediction for GlimmerHMM_glimmerT_3142-T1 Valid prediction for snap_scaffold_2-snap.147-T1 Couldn't classify 188983, 189039 Couldn't classify 192252, 192368 Sorry, prediction pasa_asmbl_24119.p1 fails validation. (CCA) AC 188983-189039 GT AGG (ATA) AG 189463-189538 GT AGG (CTA) AG 191889-191992 GT CGG (AAA) AG 192252-192368 GA TGG -recovered pasa_asmbl_24119.p1, internal, 189463, 189538 -recovered pasa_asmbl_24119.p1, internal, 191889, 191992 Valid prediction for snap_scaffold_2-snap.150-T1 Valid prediction for GeneMark_model.5110_t Valid prediction for GeneMark_model.5120_t Valid prediction for Augustus_model.g2124.t1 Valid prediction for snap_scaffold_2-snap.171-T1 Valid prediction for Augustus_model.g2137.t1 Valid prediction for GlimmerHMM_glimmerT_3166-T1 Valid prediction for GeneMark_model.5108_t Valid prediction for GeneMark_model.5080_t Valid prediction for snap_scaffold_2-snap.181-T1 Valid prediction for Augustus_model.g2128.t1 Valid prediction for GlimmerHMM_glimmerT_3150-T1 Valid prediction for Augustus_model.g2127.t1 Valid prediction for snap_scaffold_2-snap.155-T1 Valid prediction for GlimmerHMM_glimmerT_3147-T1 Valid prediction for HiQ_model.g2144.t1 Valid prediction for snap_scaffold_2-snap.136-T1 Valid prediction for GeneMark_model.5079_t Valid prediction for snap_scaffold_2-snap.167-T1 Valid prediction for snap_scaffold_2-snap.168-T1 Valid prediction for snap_scaffold_2-snap.148-T1 Valid prediction for GeneMark_model.5127_t Valid prediction for GeneMark_model.5102_t Valid prediction for GlimmerHMM_glimmerT_3170-T1 Valid prediction for GlimmerHMM_glimmerT_3148-T1 Valid prediction for GlimmerHMM_glimmerT_3139-T1 Valid prediction for GlimmerHMM_glimmerT_3146-T1 Valid prediction for GeneMark_model.5093_t Valid prediction for GeneMark_model.5136_t Couldn't classify 217347, 217560 Couldn't classify 222909, 223012 Sorry, prediction pasa_asmbl_24127.p1 fails validation. (GGA) TA 217347-217560 GC AGG (AAG) AG 217968-218065 GT TTG (ACT) AG 219495-219624 GT CGG (GGC) AG 219723-219872 GT AGG (GAG) AG 220007-220146 GT AGG (GAG) AG 220546-220611 GT TGG (TGC) AG 221130-221174 GT TGG (ACT) AG 221508-221625 GT CTG (TCA) AG 222909-223012 AG CCA -recovered pasa_asmbl_24127.p1, internal, 217968, 218065 -recovered pasa_asmbl_24127.p1, internal, 219495, 219624 -recovered pasa_asmbl_24127.p1, internal, 219723, 219872 -recovered pasa_asmbl_24127.p1, internal, 220007, 220146 -recovered pasa_asmbl_24127.p1, internal, 220546, 220611 -recovered pasa_asmbl_24127.p1, internal, 221130, 221174 -recovered pasa_asmbl_24127.p1, internal, 221508, 221625 Valid prediction for GlimmerHMM_glimmerT_3144-T1 Valid prediction for HiQ_model.g2130.t1 Valid prediction for snap_scaffold_2-snap.134-T1 Valid prediction for Augustus_model.g2147.t1 Valid prediction for GeneMark_model.5129_t Couldn't classify 3740, 4135 Sorry, prediction pasa_asmbl_24106.p1 fails validation. (CCC) CG 3740-4135 CG GAC Couldn't classify 105470, 105645 Sorry, prediction pasa_asmbl_24112.p1 fails validation. (ATG) AG 102910-103049 GT GTG (GTT) AG 103830-103937 GT GGG (GCC) AG 104342-104541 GT TGG (ACC) AG 105100-105228 GT CGG (GTG) AG 105470-105645 AG CCA -recovered pasa_asmbl_24112.p1, initial, 102910, 103049 -recovered pasa_asmbl_24112.p1, internal, 102910, 103049 -recovered pasa_asmbl_24112.p1, internal, 103830, 103937 -recovered pasa_asmbl_24112.p1, internal, 104342, 104541 -recovered pasa_asmbl_24112.p1, internal, 105100, 105228 Couldn't classify 205450, 205824 Sorry, prediction pasa_asmbl_24123.p1 fails validation. (TTC) GC 205450-205824 TG GAT Valid prediction for snap_scaffold_2-snap.159-T1 Couldn't classify 193017, 193380 Sorry, prediction pasa_asmbl_24120.p1 fails validation. (TCC) CC 193017-193380 GT GGG (GCA) AG 193516-193655 GT GAG -recovered pasa_asmbl_24120.p1, terminal, 193516, 193655 -recovered pasa_asmbl_24120.p1, internal, 193516, 193655 Couldn't classify 95910, 96224 Sorry, prediction pasa_asmbl_24111.p1 fails validation. (CAC) CC 95910-96224 GT CCG Valid prediction for snap_scaffold_2-snap.143-T1 Valid prediction for GeneMark_model.5117_t Valid prediction for GeneMark_model.5101_t Valid prediction for snap_scaffold_2-snap.175-T1 Valid prediction for GeneMark_model.5086_t Valid prediction for GlimmerHMM_glimmerT_3171-T1 Couldn't classify 61659, 61856 Sorry, prediction pasa_asmbl_24108.p1 fails validation. (TCA) TG 61659-61856 GT AGG (GCG) AG 62950-63066 GT CTG (GTG) AG 63663-63812 GT AGG (ATC) AG 64215-64379 GT AGG (GAA) AG 64550-64666 GT AGG (GAC) AG 65497-65601 GT AGG (GGA) AG 65824-65920 GT GGG (GTG) AG 66337-66449 GT GAG (TCG) AG 67065-67155 GT AGG (AGC) AG 67341-67480 GT AGG (CTT) AG 67589-67714 CC GAC -recovered pasa_asmbl_24108.p1, terminal, 67589, 67714 -recovered pasa_asmbl_24108.p1, internal, 62950, 63066 -recovered pasa_asmbl_24108.p1, internal, 63663, 63812 -recovered pasa_asmbl_24108.p1, internal, 64215, 64379 -recovered pasa_asmbl_24108.p1, internal, 64550, 64666 -recovered pasa_asmbl_24108.p1, internal, 65497, 65601 -recovered pasa_asmbl_24108.p1, internal, 65824, 65920 -recovered pasa_asmbl_24108.p1, internal, 66337, 66449 -recovered pasa_asmbl_24108.p1, internal, 67065, 67155 -recovered pasa_asmbl_24108.p1, internal, 67341, 67480 Valid prediction for snap_scaffold_2-snap.144-T1 Valid prediction for snap_scaffold_2-snap.177-T1 Valid prediction for GeneMark_model.5112_t Valid prediction for Augustus_model.g2129.t1 Valid prediction for GlimmerHMM_glimmerT_3168-T1 Valid prediction for CodingQuarry_transcript_28372-T1 Valid prediction for snap_scaffold_2-snap.156-T1 Valid prediction for snap_scaffold_2-snap.157-T1 Couldn't classify 106944, 107318 Sorry, prediction pasa_asmbl_24117.p2 fails validation. (CCG) GG 106944-107318 CA GAC Valid prediction for GlimmerHMM_glimmerT_3167-T1 Valid prediction for snap_scaffold_2-snap.170-T1 Valid prediction for GeneMark_model.5122_t Valid prediction for GlimmerHMM_glimmerT_3137-T1 Valid prediction for Augustus_model.g2131.t1 Valid prediction for GeneMark_model.5132_t Valid prediction for GeneMark_model.5084_t Valid prediction for Augustus_model.g2136.t1 Valid prediction for GeneMark_model.5137_t Couldn't classify 96615, 97069 Couldn't classify 99647, 99723 Sorry, prediction pasa_asmbl_25413.p1 fails validation. (CAG) CT 96615-97069 GT AGG (GAG) AG 97263-97349 GT AGG (GTT) AG 97681-97866 GT GAG (CGA) AG 98233-98313 GT AGG (ACG) AG 98446-98546 GT AGG (GTG) AG 99036-99146 GT CGG (CCT) AG 99288-99476 GT CGG (GTC) AG 99647-99723 TC TGT -recovered pasa_asmbl_25413.p1, internal, 97263, 97349 -recovered pasa_asmbl_25413.p1, internal, 97681, 97866 -recovered pasa_asmbl_25413.p1, internal, 98233, 98313 -recovered pasa_asmbl_25413.p1, internal, 98446, 98546 -recovered pasa_asmbl_25413.p1, internal, 99036, 99146 -recovered pasa_asmbl_25413.p1, internal, 99288, 99476 Valid prediction for GeneMark_model.5133_t Valid prediction for Augustus_model.g2138.t1 Valid prediction for snap_scaffold_2-snap.137-T1 Valid prediction for snap_scaffold_2-snap.161-T1 Valid prediction for snap_scaffold_2-snap.174-T1 Valid prediction for snap_scaffold_2-snap.152-T1 Couldn't classify 2124, 2365 Couldn't classify 2500, 3076 Sorry, prediction pasa_asmbl_24105.p2 fails validation. (TCG) AG 2124-2365 GT GGG (GTA) AG 2500-3076 CT ACC -recovered pasa_asmbl_24105.p2, internal, 2124, 2365 Valid prediction for GlimmerHMM_glimmerT_3140-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.5078_t Valid prediction for GlimmerHMM_glimmerT_3169-T1 Valid prediction for GlimmerHMM_glimmerT_3155-T1 Valid prediction for GeneMark_model.5131_t Valid prediction for snap_scaffold_2-snap.151-T1 Valid prediction for snap_scaffold_2-snap.140-T1 Valid prediction for GlimmerHMM_glimmerT_3159-T1 Valid prediction for Augustus_model.g2143.t1 Valid prediction for GlimmerHMM_glimmerT_3156-T1 Valid prediction for GlimmerHMM_glimmerT_3143-T1 Valid prediction for GlimmerHMM_glimmerT_3135-T1 Valid prediction for GeneMark_model.5098_t Valid prediction for GeneMark_model.5118_t Valid prediction for snap_scaffold_2-snap.173-T1 Valid prediction for GeneMark_model.5128_t Valid prediction for GeneMark_model.5076_t Valid prediction for GeneMark_model.5087_t Valid prediction for GeneMark_model.5107_t Valid prediction for GeneMark_model.5081_t Valid prediction for GlimmerHMM_glimmerT_3162-T1 Valid prediction for snap_scaffold_2-snap.142-T1 Couldn't classify 228018, 228133 Sorry, prediction pasa_asmbl_22838.p1 fails validation. (GTG) GT 228018-228133 GT AGG (CGA) AG 228243-228326 GT AGG (AGA) AG 228479-228569 GT ATG (ATC) AG 228665-228778 GT AGG (GTG) AG 229053-229136 GT TGG (AAC) AG 229770-229880 GT CCG (GTG) AG 231155-231250 GT AGG (ATA) AG 231463-231576 GT AGG (CTT) AG 232239-232349 CC AAC -recovered pasa_asmbl_22838.p1, terminal, 232239, 232349 -recovered pasa_asmbl_22838.p1, internal, 228243, 228326 -recovered pasa_asmbl_22838.p1, internal, 228479, 228569 -recovered pasa_asmbl_22838.p1, internal, 228665, 228778 -recovered pasa_asmbl_22838.p1, internal, 229053, 229136 -recovered pasa_asmbl_22838.p1, internal, 229770, 229880 -recovered pasa_asmbl_22838.p1, internal, 231155, 231250 -recovered pasa_asmbl_22838.p1, internal, 231463, 231576 Valid prediction for GeneMark_model.5134_t Valid prediction for snap_scaffold_2-snap.135-T1 Valid prediction for GlimmerHMM_glimmerT_3165-T1 Valid prediction for GeneMark_model.5085_t Valid prediction for GeneMark_model.5125_t Valid prediction for GlimmerHMM_glimmerT_3134-T1 Valid prediction for snap_scaffold_2-snap.158-T1 Valid prediction for CodingQuarry_transcript_28371-T1 Valid prediction for snap_scaffold_2-snap.163-T1 Valid prediction for GeneMark_model.5121_t Valid prediction for snap_scaffold_2-snap.160-T1 Valid prediction for GlimmerHMM_glimmerT_3160-T1 Valid prediction for Augustus_model.g2139.t1 Valid prediction for snap_scaffold_2-snap.149-T1 Valid prediction for GlimmerHMM_glimmerT_3154-T1 Valid prediction for GlimmerHMM_glimmerT_3136-T1 Valid prediction for snap_scaffold_2-snap.178-T1 Valid prediction for GeneMark_model.5109_t Valid prediction for snap_scaffold_2-snap.154-T1 Couldn't classify 25949, 26188 Couldn't classify 27790, 27863 Sorry, prediction pasa_asmbl_22847.p1 fails validation. (ACA) TG 25949-26188 GT AGG (GTG) AG 27315-27522 GT AGG (GTG) AG 27790-27863 CG GGC -recovered pasa_asmbl_22847.p1, internal, 27315, 27522 Valid prediction for snap_scaffold_2-snap.172-T1 Valid prediction for snap_scaffold_2-snap.180-T1 Valid prediction for GlimmerHMM_glimmerT_3164-T1 Valid prediction for GlimmerHMM_glimmerT_3172-T1 Valid prediction for Augustus_model.g2132.t1 Valid prediction for snap_scaffold_2-snap.146-T1 Valid prediction for GlimmerHMM_glimmerT_3141-T1 Valid prediction for GeneMark_model.5114_t Valid prediction for Augustus_model.g2123.t1 Valid prediction for GlimmerHMM_glimmerT_3157-T1 Valid prediction for GeneMark_model.5094_t Valid prediction for GeneMark_model.5119_t Valid prediction for GeneMark_model.5099_t Valid prediction for Augustus_model.g2149.t1 Valid prediction for GeneMark_model.5111_t Valid prediction for GeneMark_model.5090_t Valid prediction for HiQ_model.g2126.t1 Valid prediction for GeneMark_model.5096_t Valid prediction for snap_scaffold_2-snap.166-T1 Valid prediction for snap_scaffold_2-snap.169-T1 Valid prediction for GlimmerHMM_glimmerT_3158-T1 Valid prediction for snap_scaffold_2-snap.145-T1 Valid prediction for snap_scaffold_2-snap.162-T1 Valid prediction for GeneMark_model.5113_t Valid prediction for Augustus_model.g2135.t1 Valid prediction for GeneMark_model.5116_t Valid prediction for Augustus_model.g2133.t1 Valid prediction for snap_scaffold_2-snap.138-T1 Valid prediction for GeneMark_model.5123_t Valid prediction for Augustus_model.g2148.t1 Valid prediction for CodingQuarry_transcript_28374-T1 Valid prediction for GeneMark_model.5092_t Valid prediction for Augustus_model.g2134.t1 Valid prediction for GeneMark_model.5088_t Valid prediction for snap_scaffold_2-snap.133-T1 Valid prediction for GeneMark_model.5083_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9263, rend_intergenic: 6578 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18033, rend_intergenic: 9894 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34724, rend_intergenic: 18855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46083, rend_intergenic: 43833 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49571, rend_intergenic: 46101 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59412, rend_intergenic: 50826 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67714, rend_intergenic: 62837 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86352, rend_intergenic: 78855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94673, rend_intergenic: 92367 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108478, rend_intergenic: 106863 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130609, rend_intergenic: 123258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136714, rend_intergenic: 131357 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153133, rend_intergenic: 151642 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163784, rend_intergenic: 160186 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171756, rend_intergenic: 165621 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189832, rend_intergenic: 178083 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194075, rend_intergenic: 190289 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213299, rend_intergenic: 211557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228977, rend_intergenic: 221729 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234828, rend_intergenic: 230229 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 239785 -exon list size: 951 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 47 predictions from path traversal Error with prediction: snap lend_intergenic: 9263, rend_intergenic: 6578 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18033, rend_intergenic: 9894 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34724, rend_intergenic: 18855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46083, rend_intergenic: 43833 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49571, rend_intergenic: 46101 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59412, rend_intergenic: 50826 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67714, rend_intergenic: 62837 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86352, rend_intergenic: 78855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94673, rend_intergenic: 92367 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108478, rend_intergenic: 106863 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130609, rend_intergenic: 123258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136714, rend_intergenic: 131357 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153133, rend_intergenic: 151642 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163784, rend_intergenic: 160186 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171756, rend_intergenic: 165621 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189832, rend_intergenic: 178083 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194075, rend_intergenic: 190289 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213299, rend_intergenic: 211557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228977, rend_intergenic: 221729 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234828, rend_intergenic: 230229 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 34 predictions persist after filtering for low support