-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2/scaffold_2_19186104-19406861

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.9457_t
Valid prediction for GeneMark_model.9437_t
Valid prediction for GeneMark_model.9417_t
Valid prediction for GlimmerHMM_glimmerT_5791-T1
Valid prediction for GlimmerHMM_glimmerT_5783-T1
Valid prediction for GlimmerHMM_glimmerT_5759-T1
Couldn't classify 164420, 164659
Sorry, prediction pasa_asmbl_25309.p1 fails validation.
(GGT)	 CA	164420-164659	GT	AGG
(GTG)	 AG	164981-165596	GT	AGG
(GTA)	 AG	167408-167673	GT	AGG
(GTT)	 AG	167755-168177	GA	GAG
-recovered pasa_asmbl_25309.p1, terminal, 167755, 168177
-recovered pasa_asmbl_25309.p1, internal, 164981, 165596
-recovered pasa_asmbl_25309.p1, internal, 167408, 167673
Valid prediction for GeneMark_model.9390_t
Valid prediction for Augustus_model.g3881.t1
Valid prediction for snap_scaffold_2-snap.3834-T1
Valid prediction for GlimmerHMM_glimmerT_5764-T1
Valid prediction for snap_scaffold_2-snap.3809-T1
Couldn't classify 134035, 134204
Sorry, prediction pasa_asmbl_25304.p1 fails validation.
(ATG)	 CC	129209-129389	GT	TGG
(AGT)	 AG	129586-129731	GT	AGG
(ACC)	 AG	131389-131570	GT	AGG
(ACA)	 AG	131729-131828	GT	AGG
(GTG)	 AG	131995-132116	GT	AGG
(TGA)	 AG	132855-132961	GT	AGG
(GTG)	 AG	134035-134204	GT	GGG
-recovered pasa_asmbl_25304.p1, initial, 129209, 129389
-recovered pasa_asmbl_25304.p1, terminal, 132855, 132961
-recovered pasa_asmbl_25304.p1, internal, 129586, 129731
-recovered pasa_asmbl_25304.p1, internal, 131389, 131570
-recovered pasa_asmbl_25304.p1, internal, 131729, 131828
-recovered pasa_asmbl_25304.p1, internal, 131995, 132116
-recovered pasa_asmbl_25304.p1, internal, 132855, 132961
-recovered pasa_asmbl_25304.p1, internal, 134035, 134204
Valid prediction for GeneMark_model.9405_t
Valid prediction for GeneMark_model.9455_t
Valid prediction for GeneMark_model.9434_t
Valid prediction for GeneMark_model.9400_t
Valid prediction for HiQ_model.g3883.t1
Couldn't classify 134560, 134623
Couldn't classify 136313, 136515
Sorry, prediction pasa_asmbl_25372.p1 fails validation.
(CTC)	 AG	134560-134623	GT	TGG
(AAG)	 AG	136077-136148	GT	AGG
(GGG)	 AG	136313-136515	GT	AGG
-recovered pasa_asmbl_25372.p1, internal, 134560, 134623
-recovered pasa_asmbl_25372.p1, internal, 136077, 136148
-recovered pasa_asmbl_25372.p1, internal, 136313, 136515
Valid prediction for GlimmerHMM_glimmerT_5773-T1
Valid prediction for GeneMark_model.9450_t
Valid prediction for snap_scaffold_2-snap.3820-T1
Valid prediction for GeneMark_model.9403_t
Valid prediction for GlimmerHMM_glimmerT_5790-T1
Valid prediction for GeneMark_model.9430_t
Valid prediction for snap_scaffold_2-snap.3801-T1
Valid prediction for pasa_asmbl_25302.p1
Valid prediction for snap_scaffold_2-snap.3797-T1
Valid prediction for Augustus_model.g3884.t1
Valid prediction for GeneMark_model.9426_t
Valid prediction for GeneMark_model.9436_t
Valid prediction for GeneMark_model.9395_t
Valid prediction for snap_scaffold_2-snap.3810-T1
Valid prediction for GeneMark_model.9419_t
Valid prediction for GeneMark_model.9397_t
Couldn't classify 178404, 178440
Couldn't classify 178541, 178601
Sorry, prediction CodingQuarry_transcript_28819-T1 fails validation.
(ATG)	 TT	178217-178379	GC	AGG
(TCA)	 AG	178404-178440	AG	AGA
(AGA)	 AC	178541-178601	TT	GAT
-recovered CodingQuarry_transcript_28819-T1, initial, 178217, 178379
Valid prediction for GeneMark_model.9441_t
Valid prediction for GeneMark_model.9448_t
Valid prediction for snap_scaffold_2-snap.3819-T1
Valid prediction for GlimmerHMM_glimmerT_5789-T1
Valid prediction for snap_scaffold_2-snap.3830-T1
Valid prediction for snap_scaffold_2-snap.3804-T1
Valid prediction for GlimmerHMM_glimmerT_5775-T1
Valid prediction for GeneMark_model.9411_t
Valid prediction for snap_scaffold_2-snap.3789-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_5781-T1
Valid prediction for GeneMark_model.9433_t
Valid prediction for snap_scaffold_2-snap.3793-T1
Valid prediction for GeneMark_model.9446_t
Valid prediction for GlimmerHMM_glimmerT_5766-T1
Valid prediction for snap_scaffold_2-snap.3836-T1
Valid prediction for GeneMark_model.9422_t
Valid prediction for snap_scaffold_2-snap.3832-T1
Valid prediction for GlimmerHMM_glimmerT_5788-T1
Valid prediction for Augustus_model.g3880.t1
Valid prediction for GlimmerHMM_glimmerT_5785-T1
Valid prediction for GlimmerHMM_glimmerT_5782-T1
Valid prediction for GeneMark_model.9402_t
Valid prediction for GeneMark_model.9428_t
Valid prediction for snap_scaffold_2-snap.3823-T1
Valid prediction for GeneMark_model.9399_t
Valid prediction for CodingQuarry_transcript_28818-T1
Valid prediction for snap_scaffold_2-snap.3827-T1
Valid prediction for GeneMark_model.9439_t
Valid prediction for GlimmerHMM_glimmerT_5767-T1
Valid prediction for GeneMark_model.9427_t
Couldn't classify 172313, 172616
Sorry, prediction pasa_asmbl_25312.p1 fails validation.
(CAC)	 CC	172313-172616	GT	CAG
(GTT)	 AG	173173-173276	GT	CGG
(GCA)	 AG	175414-175590	GC	GAG
-recovered pasa_asmbl_25312.p1, terminal, 175414, 175590
-recovered pasa_asmbl_25312.p1, internal, 173173, 173276
-recovered pasa_asmbl_25312.p1, internal, 175414, 175590
Valid prediction for GlimmerHMM_glimmerT_5777-T1
Valid prediction for GlimmerHMM_glimmerT_5780-T1
Valid prediction for snap_scaffold_2-snap.3812-T1
Valid prediction for GlimmerHMM_glimmerT_5768-T1
Valid prediction for snap_scaffold_2-snap.3815-T1
Valid prediction for snap_scaffold_2-snap.3807-T1
Valid prediction for snap_scaffold_2-snap.3825-T1
Valid prediction for snap_scaffold_2-snap.3798-T1
Valid prediction for GeneMark_model.9415_t
Valid prediction for snap_scaffold_2-snap.3788-T1
Valid prediction for snap_scaffold_2-snap.3803-T1
Valid prediction for GeneMark_model.9444_t
Valid prediction for GeneMark_model.9408_t
Valid prediction for GlimmerHMM_glimmerT_5787-T1
Valid prediction for GeneMark_model.9424_t
Valid prediction for CodingQuarry_transcript_28816-T1
Valid prediction for snap_scaffold_2-snap.3817-T1
Valid prediction for snap_scaffold_2-snap.3800-T1
Valid prediction for GeneMark_model.9432_t
Valid prediction for GeneMark_model.9453_t
Valid prediction for GeneMark_model.9413_t
Valid prediction for Augustus_model.g3879.t1
Valid prediction for GeneMark_model.9392_t
Valid prediction for snap_scaffold_2-snap.3794-T1
Valid prediction for GeneMark_model.9409_t
Valid prediction for GeneMark_model.9394_t
Valid prediction for snap_scaffold_2-snap.3795-T1
Valid prediction for Augustus_model.g3882.t1
Valid prediction for snap_scaffold_2-snap.3829-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.9414_t
Valid prediction for pasa_asmbl_23877.p1
Valid prediction for GlimmerHMM_glimmerT_5771-T1
Valid prediction for GeneMark_model.9416_t
Valid prediction for GlimmerHMM_glimmerT_5765-T1
Valid prediction for snap_scaffold_2-snap.3799-T1
Valid prediction for Augustus_model.g3888.t1
Valid prediction for GlimmerHMM_glimmerT_5778-T1
Valid prediction for snap_scaffold_2-snap.3818-T1
Valid prediction for GeneMark_model.9401_t
Valid prediction for GlimmerHMM_glimmerT_5786-T1
Valid prediction for GeneMark_model.9447_t
Valid prediction for GlimmerHMM_glimmerT_5762-T1
Valid prediction for GlimmerHMM_glimmerT_5784-T1
Valid prediction for GeneMark_model.9398_t
Valid prediction for GeneMark_model.9456_t
Valid prediction for Augustus_model.g3872.t1
Valid prediction for Augustus_model.g3887.t1
Valid prediction for GlimmerHMM_glimmerT_5763-T1
Valid prediction for snap_scaffold_2-snap.3790-T1
Valid prediction for pasa_asmbl_23884.p1
Valid prediction for GlimmerHMM_glimmerT_5760-T1
Valid prediction for snap_scaffold_2-snap.3791-T1
Valid prediction for snap_scaffold_2-snap.3811-T1
Valid prediction for GeneMark_model.9410_t
Couldn't classify 121260, 121326
Sorry, prediction pasa_asmbl_23873.p1 fails validation.
(CAG)	 GT	121260-121326	GT	GAG
(GTT)	 AG	122005-122175	GT	TGG
(GTC)	 AG	122333-122430	GT	TGG
(GAG)	 AG	122855-122946	GT	AGG
(TAA)	 AG	123301-123442	GT	AGG
(GCA)	 AG	123622-123724	GT	CAG
(ACA)	 AG	123883-123953	GT	ACG
(GTT)	 AG	124465-124541	GT	GGG
(ACC)	 AG	124968-125063	GT	CAG
(TCT)	 AG	125588-125654	GT	GGG
(TTC)	 AG	126251-126421	GC	AAG
-recovered pasa_asmbl_23873.p1, terminal, 126251, 126421
-recovered pasa_asmbl_23873.p1, internal, 122005, 122175
-recovered pasa_asmbl_23873.p1, internal, 122333, 122430
-recovered pasa_asmbl_23873.p1, internal, 122855, 122946
-recovered pasa_asmbl_23873.p1, internal, 123301, 123442
-recovered pasa_asmbl_23873.p1, internal, 123622, 123724
-recovered pasa_asmbl_23873.p1, internal, 123883, 123953
-recovered pasa_asmbl_23873.p1, internal, 124465, 124541
-recovered pasa_asmbl_23873.p1, internal, 124968, 125063
-recovered pasa_asmbl_23873.p1, internal, 125588, 125654
-recovered pasa_asmbl_23873.p1, internal, 126251, 126421
Valid prediction for GeneMark_model.9449_t
Valid prediction for GeneMark_model.9445_t
Valid prediction for GeneMark_model.9406_t
Valid prediction for snap_scaffold_2-snap.3816-T1
Valid prediction for GeneMark_model.9396_t
Couldn't classify 204212, 204288
Sorry, prediction pasa_asmbl_23872.p1 fails validation.
(AAG)	 CT	204212-204288	GT	AGG
(ATT)	 AG	204899-205002	GT	AGG
(ATG)	 AG	207034-207167	GT	CCG
(GAG)	 AG	207495-207557	GT	CAG
(CAT)	 AG	207922-208059	CC	AAC
add_exon() Sorry, pasa_asmbl_23872.p1 207034-207167-initial-1 is invalid.
-recovered pasa_asmbl_23872.p1, initial, 207034, 207167
add_exon() Sorry, pasa_asmbl_23872.p1 204899-205002-terminal-2 is invalid.
-recovered pasa_asmbl_23872.p1, terminal, 204899, 205002
-recovered pasa_asmbl_23872.p1, terminal, 207922, 208059
-recovered pasa_asmbl_23872.p1, internal, 204899, 205002
-recovered pasa_asmbl_23872.p1, internal, 207034, 207167
-recovered pasa_asmbl_23872.p1, internal, 207495, 207557
Valid prediction for snap_scaffold_2-snap.3808-T1
Valid prediction for snap_scaffold_2-snap.3822-T1
Valid prediction for Augustus_model.g3873.t1
Valid prediction for CodingQuarry_transcript_28814-T1
Valid prediction for GeneMark_model.9393_t
Valid prediction for GeneMark_model.9442_t
Couldn't classify 126251, 126370
Couldn't classify 127068, 127118
Sorry, prediction CodingQuarry_transcript_28813-T1 fails validation.
(ATG)	 TC	121272-121326	GT	GAG
(GTT)	 AG	122005-122175	GT	TGG
(GTC)	 AG	122333-122430	GT	TGG
(GAG)	 AG	122855-122946	GT	AGG
(TAA)	 AG	123301-123442	GT	AGG
(GCA)	 AG	123622-123724	GT	CAG
(ACA)	 AG	123883-123953	GT	ACG
(GTT)	 AG	124465-124541	GT	GGG
(ACC)	 AG	124968-125063	GT	CAG
(TCT)	 AG	125588-125654	GT	GGG
(TTC)	 AG	126251-126370	CT	ACC
(CTG)	 AC	127068-127118	GC	AAG
-recovered CodingQuarry_transcript_28813-T1, initial, 121272, 121326
-recovered CodingQuarry_transcript_28813-T1, internal, 122005, 122175
-recovered CodingQuarry_transcript_28813-T1, internal, 122333, 122430
-recovered CodingQuarry_transcript_28813-T1, internal, 122855, 122946
-recovered CodingQuarry_transcript_28813-T1, internal, 123301, 123442
-recovered CodingQuarry_transcript_28813-T1, internal, 123622, 123724
-recovered CodingQuarry_transcript_28813-T1, internal, 123883, 123953
-recovered CodingQuarry_transcript_28813-T1, internal, 124465, 124541
-recovered CodingQuarry_transcript_28813-T1, internal, 124968, 125063
-recovered CodingQuarry_transcript_28813-T1, internal, 125588, 125654
Valid prediction for GlimmerHMM_glimmerT_5774-T1
Valid prediction for GeneMark_model.9423_t
Valid prediction for GeneMark_model.9443_t
Valid prediction for snap_scaffold_2-snap.3796-T1
Valid prediction for Augustus_model.g3875.t1
Valid prediction for GeneMark_model.9404_t
Valid prediction for GeneMark_model.9425_t
Valid prediction for snap_scaffold_2-snap.3824-T1
Valid prediction for GlimmerHMM_glimmerT_5776-T1
Valid prediction for GeneMark_model.9389_t
Valid prediction for GeneMark_model.9431_t
Valid prediction for GeneMark_model.9440_t
Valid prediction for snap_scaffold_2-snap.3826-T1
Valid prediction for GeneMark_model.9391_t
Valid prediction for CodingQuarry_transcript_28820-T1
Valid prediction for snap_scaffold_2-snap.3813-T1
Valid prediction for HiQ_model.g3878.t1
Valid prediction for CodingQuarry_transcript_28815-T1
Valid prediction for Augustus_model.g3876.t1
Valid prediction for GeneMark_model.9438_t
Valid prediction for snap_scaffold_2-snap.3814-T1
Valid prediction for GlimmerHMM_glimmerT_5761-T1
Valid prediction for GeneMark_model.9418_t
Valid prediction for GeneMark_model.9388_t
Valid prediction for Augustus_model.g3885.t1
Valid prediction for GlimmerHMM_glimmerT_5770-T1
Valid prediction for snap_scaffold_2-snap.3837-T1
Valid prediction for GeneMark_model.9412_t
Valid prediction for snap_scaffold_2-snap.3821-T1
Valid prediction for snap_scaffold_2-snap.3833-T1
Valid prediction for snap_scaffold_2-snap.3792-T1
Valid prediction for GeneMark_model.9452_t
Couldn't classify 9896, 10045
Sorry, prediction pasa_asmbl_23887.p1 fails validation.
(ATG)	 CC	8211-8405	GT	AGG
(GTT)	 AG	9896-10045	CG	CAC
-recovered pasa_asmbl_23887.p1, initial, 8211, 8405
Valid prediction for GeneMark_model.9454_t
Valid prediction for snap_scaffold_2-snap.3805-T1
Valid prediction for snap_scaffold_2-snap.3806-T1
Valid prediction for snap_scaffold_2-snap.3835-T1
Valid prediction for GeneMark_model.9407_t
Valid prediction for GlimmerHMM_glimmerT_5772-T1
Valid prediction for CodingQuarry_transcript_28812-T1
Valid prediction for snap_scaffold_2-snap.3802-T1
Valid prediction for HiQ_model.g3877.t1
Valid prediction for Augustus_model.g3886.t1
Valid prediction for snap_scaffold_2-snap.3831-T1
Valid prediction for GeneMark_model.9421_t
Valid prediction for snap_scaffold_2-snap.3828-T1
Valid prediction for GlimmerHMM_glimmerT_5779-T1
Valid prediction for GeneMark_model.9420_t
Couldn't classify 201842, 201934
Couldn't classify 202933, 203046
Sorry, prediction pasa_asmbl_24033.p1 fails validation.
(CGT)	 CA	201842-201934	GT	TGG
(GAG)	 AG	202235-202348	GT	TGG
(GTG)	 AG	202933-203046	TT	GGT
-recovered pasa_asmbl_24033.p1, internal, 202235, 202348
Valid prediction for Augustus_model.g3874.t1
Valid prediction for GeneMark_model.9435_t
Valid prediction for GlimmerHMM_glimmerT_5769-T1
Valid prediction for GeneMark_model.9451_t
Valid prediction for GeneMark_model.9429_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10425, rend_intergenic: 6721  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37016, rend_intergenic: 16755  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50284, rend_intergenic: 37556  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58351, rend_intergenic: 50498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62501, rend_intergenic: 58518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65017, rend_intergenic: 63486  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69937, rend_intergenic: 67710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87611, rend_intergenic: 76057  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98902, rend_intergenic: 95553  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109584, rend_intergenic: 103378  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112679, rend_intergenic: 110106  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124891, rend_intergenic: 116852  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138822, rend_intergenic: 129588  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156542, rend_intergenic: 153173  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161931, rend_intergenic: 158441  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164451, rend_intergenic: 163629  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168177, rend_intergenic: 164491  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175590, rend_intergenic: 174477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180142, rend_intergenic: 176101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195169, rend_intergenic: 192638  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200702, rend_intergenic: 197670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205817, rend_intergenic: 202560  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208388, rend_intergenic: 206098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 220758
-exon list size: 948


building trellis

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16.8    
16.9    
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17.8    
17.9    
18.0    
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18.7    
18.8    
18.9    
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19.8    
19.9    
20.0    
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20.7    
20.8    
20.9    
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21.8    
21.9    
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22.8    
22.9    
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23.8    
23.9    
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24.6    
24.7    
24.8    
24.9    
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25.7    
25.8    
25.9    
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26.7    
26.8    
26.9    
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27.6    
27.7    
27.8    
27.9    
28.0    
28.1    
28.2    
28.3    
28.4    
28.5    
28.6    
28.7    
28.8    
28.9    
29.1    
29.2    
29.3    
29.4    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.3    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 10425, rend_intergenic: 6721  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37016, rend_intergenic: 16755  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50284, rend_intergenic: 37556  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58351, rend_intergenic: 50498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62501, rend_intergenic: 58518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65017, rend_intergenic: 63486  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69937, rend_intergenic: 67710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87611, rend_intergenic: 76057  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98902, rend_intergenic: 95553  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109584, rend_intergenic: 103378  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112679, rend_intergenic: 110106  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124891, rend_intergenic: 116852  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138822, rend_intergenic: 129588  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156542, rend_intergenic: 153173  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161931, rend_intergenic: 158441  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164451, rend_intergenic: 163629  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168177, rend_intergenic: 164491  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175590, rend_intergenic: 174477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180142, rend_intergenic: 176101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195169, rend_intergenic: 192638  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200702, rend_intergenic: 197670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205817, rend_intergenic: 202560  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208388, rend_intergenic: 206098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support