-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2/scaffold_2_15526860-15792301

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_5220-T1
Valid prediction for GlimmerHMM_glimmerT_5206-T1
Valid prediction for snap_scaffold_2-snap.3017-T1
Valid prediction for GeneMark_model.8380_t
Valid prediction for GlimmerHMM_glimmerT_5211-T1
Valid prediction for GeneMark_model.8375_t
Couldn't classify 91192, 91247
Couldn't classify 92256, 92649
Sorry, prediction pasa_asmbl_25085.p1 fails validation.
(GAG)	 GC	91192-91247	GT	AGG
(TCA)	 AG	91433-91591	GT	AGG
(ATC)	 AG	91812-92144	GT	AGG
(GTC)	 AG	92256-92649	GG	GGG
-recovered pasa_asmbl_25085.p1, internal, 91433, 91591
-recovered pasa_asmbl_25085.p1, internal, 91812, 92144
Valid prediction for snap_scaffold_2-snap.3023-T1
Valid prediction for Augustus_model.g3533.t1
Valid prediction for GlimmerHMM_glimmerT_5218-T1
Valid prediction for CodingQuarry_transcript_28724-T1
Valid prediction for snap_scaffold_2-snap.3034-T1
Valid prediction for GeneMark_model.8386_t
Valid prediction for GlimmerHMM_glimmerT_5239-T1
Valid prediction for GlimmerHMM_glimmerT_5213-T1
Valid prediction for GlimmerHMM_glimmerT_5245-T1
Valid prediction for CodingQuarry_transcript_28727-T1
Valid prediction for GlimmerHMM_glimmerT_5227-T1
Valid prediction for GeneMark_model.8387_t
Valid prediction for pasa_asmbl_25088.p1
Valid prediction for GeneMark_model.8360_t
Valid prediction for GeneMark_model.8377_t
Valid prediction for snap_scaffold_2-snap.3000-T1
Valid prediction for GlimmerHMM_glimmerT_5226-T1
Valid prediction for GeneMark_model.8349_t
Valid prediction for GlimmerHMM_glimmerT_5231-T1
Valid prediction for Augustus_model.g3536.t1
Valid prediction for snap_scaffold_2-snap.3005-T1
Valid prediction for GeneMark_model.8344_t
Valid prediction for GlimmerHMM_glimmerT_5248-T1
Valid prediction for GeneMark_model.8362_t
Valid prediction for GeneMark_model.8353_t
Valid prediction for CodingQuarry_transcript_28729-T1
Valid prediction for GlimmerHMM_glimmerT_5222-T1
Valid prediction for snap_scaffold_2-snap.3010-T1
Valid prediction for HiQ_model.g3538.t1
Valid prediction for GeneMark_model.8401_t
Valid prediction for HiQ_model.g3535.t1
Valid prediction for HiQ_model.g3531.t1
Valid prediction for GlimmerHMM_glimmerT_5204-T1
Valid prediction for Augustus_model.g3528.t1
Valid prediction for GlimmerHMM_glimmerT_5243-T1
Valid prediction for snap_scaffold_2-snap.3041-T1
Valid prediction for GeneMark_model.8395_t
Valid prediction for snap_scaffold_2-snap.3006-T1
Valid prediction for Augustus_model.g3541.t1
Valid prediction for snap_scaffold_2-snap.3009-T1
Valid prediction for Augustus_model.g3543.t1
Couldn't classify 85360, 85500
Couldn't classify 90001, 90201
Sorry, prediction pasa_asmbl_25466.p1 fails validation.
(AGG)	 GT	85360-85500	GT	AGG
(TCA)	 AG	85733-85874	GT	GGG
(GCT)	 AG	87588-87721	GT	CCG
(GAG)	 AG	88058-88180	GT	AGG
(GAG)	 AG	90001-90201	CC	AGC
-recovered pasa_asmbl_25466.p1, internal, 85733, 85874
-recovered pasa_asmbl_25466.p1, internal, 87588, 87721
-recovered pasa_asmbl_25466.p1, internal, 88058, 88180
Valid prediction for CodingQuarry_transcript_28728-T1
Valid prediction for GeneMark_model.8371_t
Valid prediction for GlimmerHMM_glimmerT_5238-T1
Valid prediction for GlimmerHMM_glimmerT_5223-T1
Valid prediction for GlimmerHMM_glimmerT_5216-T1
Valid prediction for snap_scaffold_2-snap.3019-T1
Valid prediction for GlimmerHMM_glimmerT_5236-T1
Valid prediction for snap_scaffold_2-snap.3045-T1
Valid prediction for snap_scaffold_2-snap.3036-T1
Valid prediction for pasa_asmbl_25096.p1
Valid prediction for GeneMark_model.8397_t
Valid prediction for GeneMark_model.8394_t
Valid prediction for snap_scaffold_2-snap.2998-T1
Valid prediction for GeneMark_model.8354_t
Valid prediction for snap_scaffold_2-snap.3028-T1
Valid prediction for GlimmerHMM_glimmerT_5234-T1
Valid prediction for GeneMark_model.8356_t
Valid prediction for pasa_asmbl_25091.p1
Valid prediction for Augustus_model.g3542.t1
Valid prediction for GlimmerHMM_glimmerT_5241-T1
Valid prediction for GeneMark_model.8367_t
Valid prediction for GeneMark_model.8393_t
Valid prediction for GeneMark_model.8345_t
Valid prediction for GlimmerHMM_glimmerT_5244-T1
Valid prediction for snap_scaffold_2-snap.3003-T1
Valid prediction for snap_scaffold_2-snap.3022-T1
Valid prediction for snap_scaffold_2-snap.3013-T1
Valid prediction for snap_scaffold_2-snap.3037-T1
Valid prediction for Augustus_model.g3545.t1
Valid prediction for Augustus_model.g3525.t1
Valid prediction for Augustus_model.g3544.t1
Valid prediction for snap_scaffold_2-snap.3031-T1
Valid prediction for Augustus_model.g3548.t1
Valid prediction for GeneMark_model.8347_t
Valid prediction for GeneMark_model.8369_t
Valid prediction for GlimmerHMM_glimmerT_5247-T1
Valid prediction for GlimmerHMM_glimmerT_5215-T1
Valid prediction for Augustus_model.g3522.t1
Valid prediction for GeneMark_model.8355_t
Valid prediction for GeneMark_model.8381_t
Valid prediction for GlimmerHMM_glimmerT_5219-T1
Valid prediction for GeneMark_model.8383_t
Valid prediction for GeneMark_model.8359_t
Valid prediction for snap_scaffold_2-snap.3030-T1
Valid prediction for GeneMark_model.8389_t
Valid prediction for GlimmerHMM_glimmerT_5235-T1
Valid prediction for Augustus_model.g3540.t1
Valid prediction for GeneMark_model.8390_t
Valid prediction for snap_scaffold_2-snap.3033-T1
Valid prediction for snap_scaffold_2-snap.3011-T1
Valid prediction for snap_scaffold_2-snap.3012-T1
Valid prediction for snap_scaffold_2-snap.3032-T1
Valid prediction for snap_scaffold_2-snap.3027-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_2-snap.3015-T1
Valid prediction for snap_scaffold_2-snap.3029-T1
Valid prediction for Augustus_model.g3527.t1
Valid prediction for GlimmerHMM_glimmerT_5207-T1
Valid prediction for GeneMark_model.8357_t
Valid prediction for snap_scaffold_2-snap.3001-T1
Couldn't classify 153121, 153391
Sorry, prediction pasa_asmbl_23657.p3 fails validation.
(GTG)	 AC	153121-153391	GT	GGG
(AAT)	 AG	153982-154019	GT	AGG
(GTG)	 AG	154931-154936	AG	AAA
-recovered pasa_asmbl_23657.p3, terminal, 154931, 154936
-recovered pasa_asmbl_23657.p3, internal, 153982, 154019
Valid prediction for GlimmerHMM_glimmerT_5221-T1
Valid prediction for GeneMark_model.8384_t
Valid prediction for snap_scaffold_2-snap.3007-T1
Valid prediction for CodingQuarry_transcript_28725-T1
Valid prediction for snap_scaffold_2-snap.3016-T1
Valid prediction for GlimmerHMM_glimmerT_5249-T1
Valid prediction for pasa_asmbl_23664.p1
Valid prediction for GeneMark_model.8379_t
Valid prediction for Augustus_model.g3537.t1
Valid prediction for Augustus_model.g3539.t1
Valid prediction for snap_scaffold_2-snap.3026-T1
Valid prediction for snap_scaffold_2-snap.2999-T1
Valid prediction for CodingQuarry_transcript_28723-T1
Valid prediction for snap_scaffold_2-snap.3040-T1
Valid prediction for GlimmerHMM_glimmerT_5225-T1
Valid prediction for GeneMark_model.8366_t
Valid prediction for GeneMark_model.8351_t
Valid prediction for GeneMark_model.8402_t
Couldn't classify 109837, 110142
Sorry, prediction pasa_asmbl_23667.p1 fails validation.
(ATG)	 AC	109837-110142	CT	ATC
Valid prediction for GlimmerHMM_glimmerT_5242-T1
Valid prediction for Augustus_model.g3521.t1
Valid prediction for snap_scaffold_2-snap.3035-T1
Valid prediction for pasa_asmbl_23662.p1
Valid prediction for GlimmerHMM_glimmerT_5228-T1
Valid prediction for GeneMark_model.8363_t
Valid prediction for GeneMark_model.8358_t
Valid prediction for GeneMark_model.8370_t
Valid prediction for CodingQuarry_transcript_28726-T1
Valid prediction for GlimmerHMM_glimmerT_5232-T1
Valid prediction for GlimmerHMM_glimmerT_5233-T1
Valid prediction for GeneMark_model.8378_t
Valid prediction for snap_scaffold_2-snap.3020-T1
Valid prediction for snap_scaffold_2-snap.3046-T1
Valid prediction for GlimmerHMM_glimmerT_5210-T1
Valid prediction for snap_scaffold_2-snap.3025-T1
Valid prediction for snap_scaffold_2-snap.3039-T1
Valid prediction for snap_scaffold_2-snap.3024-T1
Valid prediction for Augustus_model.g3546.t1
Valid prediction for GlimmerHMM_glimmerT_5209-T1
Valid prediction for Augustus_model.g3524.t1
Valid prediction for GlimmerHMM_glimmerT_5237-T1
Valid prediction for GeneMark_model.8365_t
Valid prediction for GeneMark_model.8364_t
Valid prediction for Augustus_model.g3547.t1
Valid prediction for GeneMark_model.8398_t
Valid prediction for snap_scaffold_2-snap.3014-T1
Valid prediction for snap_scaffold_2-snap.3038-T1
Valid prediction for GeneMark_model.8399_t
Valid prediction for GeneMark_model.8376_t
Valid prediction for pasa_asmbl_23659.p1
Valid prediction for snap_scaffold_2-snap.3021-T1
Valid prediction for GeneMark_model.8350_t
Valid prediction for GlimmerHMM_glimmerT_5203-T1
Couldn't classify 87949, 88158
Sorry, prediction pasa_asmbl_23668.p1 fails validation.
(ACA)	 GG	87949-88158	GT	AGG
(CTG)	 AG	88505-88651	GT	TGG
(GAC)	 AG	88788-88865	GT	CTG
(GTC)	 AG	88978-89029	GT	AGG
(ATG)	 AG	89360-89484	GT	CTG
(CCA)	 AG	89658-89865	GT	CTG
(CGT)	 AG	90034-90098	GT	AGG
(CCT)	 AG	90237-90295	GT	TGG
(TTT)	 AG	90446-90491	GT	TGG
(GTG)	 AG	90606-90719	CA	GAC
add_exon() Sorry, pasa_asmbl_23668.p1 89360-89484-initial-1 is invalid.
-recovered pasa_asmbl_23668.p1, initial, 89360, 89484
-recovered pasa_asmbl_23668.p1, terminal, 90606, 90719
-recovered pasa_asmbl_23668.p1, internal, 88505, 88651
-recovered pasa_asmbl_23668.p1, internal, 88788, 88865
-recovered pasa_asmbl_23668.p1, internal, 88978, 89029
-recovered pasa_asmbl_23668.p1, internal, 89360, 89484
-recovered pasa_asmbl_23668.p1, internal, 89658, 89865
-recovered pasa_asmbl_23668.p1, internal, 90034, 90098
-recovered pasa_asmbl_23668.p1, internal, 90237, 90295
-recovered pasa_asmbl_23668.p1, internal, 90446, 90491
Valid prediction for GlimmerHMM_glimmerT_5217-T1
Valid prediction for GlimmerHMM_glimmerT_5212-T1
Valid prediction for GeneMark_model.8385_t
Valid prediction for GeneMark_model.8391_t
Valid prediction for GeneMark_model.8348_t
Valid prediction for GeneMark_model.8392_t
Valid prediction for GeneMark_model.8400_t
Valid prediction for snap_scaffold_2-snap.3004-T1
Valid prediction for GeneMark_model.8373_t
Valid prediction for GlimmerHMM_glimmerT_5246-T1
Couldn't classify 155644, 156072
Sorry, prediction pasa_asmbl_23655.p1 fails validation.
(TCT)	 TG	155644-156072	AA	GAA
Valid prediction for snap_scaffold_2-snap.3008-T1
Valid prediction for GeneMark_model.8368_t
Valid prediction for GeneMark_model.8388_t
Valid prediction for GlimmerHMM_glimmerT_5224-T1
Valid prediction for snap_scaffold_2-snap.3044-T1
Valid prediction for snap_scaffold_2-snap.3002-T1
Valid prediction for GeneMark_model.8346_t
Valid prediction for GeneMark_model.8372_t
Valid prediction for GlimmerHMM_glimmerT_5240-T1
Valid prediction for GeneMark_model.8382_t
Valid prediction for HiQ_model.g3530.t1
Couldn't classify 110384, 110611
Couldn't classify 112858, 112911
Sorry, prediction pasa_asmbl_23666.p1 fails validation.
(GAG)	 AG	110384-110611	GT	TGG
(TGG)	 AG	110711-110780	GT	AGG
(GTC)	 AG	110874-111043	GT	AGG
(GTC)	 AG	111824-112062	GT	AAG
(GCA)	 AG	112169-112235	GT	AGG
(CTG)	 AG	112406-112464	GT	AGG
(TGG)	 AG	112588-112732	GT	CGG
(ATG)	 AG	112858-112911	CT	CCC
-recovered pasa_asmbl_23666.p1, internal, 110384, 110611
-recovered pasa_asmbl_23666.p1, internal, 110711, 110780
-recovered pasa_asmbl_23666.p1, internal, 110874, 111043
-recovered pasa_asmbl_23666.p1, internal, 111824, 112062
-recovered pasa_asmbl_23666.p1, internal, 112169, 112235
-recovered pasa_asmbl_23666.p1, internal, 112406, 112464
-recovered pasa_asmbl_23666.p1, internal, 112588, 112732
Valid prediction for Augustus_model.g3529.t1
Valid prediction for GeneMark_model.8352_t
Valid prediction for GeneMark_model.8374_t
Valid prediction for GlimmerHMM_glimmerT_5230-T1
Valid prediction for GlimmerHMM_glimmerT_5205-T1
Valid prediction for Augustus_model.g3526.t1
Couldn't classify 22301, 22380
Sorry, prediction pasa_asmbl_23672.p1 fails validation.
(ATG)	 GG	20917-20956	GT	AGG
(TGG)	 AG	21702-21897	GT	GCG
(GTA)	 AG	22007-22200	GT	AGG
(AGA)	 AG	22301-22380	GG	CTG
-recovered pasa_asmbl_23672.p1, initial, 20917, 20956
-recovered pasa_asmbl_23672.p1, internal, 21702, 21897
-recovered pasa_asmbl_23672.p1, internal, 22007, 22200
Valid prediction for HiQ_model.g3534.t1
Valid prediction for GlimmerHMM_glimmerT_5229-T1
Valid prediction for snap_scaffold_2-snap.3042-T1
Valid prediction for Augustus_model.g3523.t1
Valid prediction for GeneMark_model.8396_t
Valid prediction for snap_scaffold_2-snap.3043-T1
Valid prediction for HiQ_model.g3532.t1
Valid prediction for GlimmerHMM_glimmerT_5214-T1
Couldn't classify 113011, 113033
Couldn't classify 117712, 117840
Sorry, prediction pasa_asmbl_23995.p1 fails validation.
(TTG)	 AC	113011-113033	GT	TAG
(CAA)	 AG	113393-113493	GT	TGG
(TTG)	 AG	113856-114077	GT	AGG
(GAT)	 AG	114564-114709	GT	AGG
(ATG)	 AG	116622-116755	GT	AGG
(CTA)	 AG	117151-117283	GT	AGG
(GAG)	 AG	117384-117590	GT	AGG
(GTG)	 AG	117712-117840	GT	AGG
-recovered pasa_asmbl_23995.p1, initial, 116622, 116755
add_exon() Sorry, pasa_asmbl_23995.p1 116622-116755-terminal-2 is invalid.
-recovered pasa_asmbl_23995.p1, terminal, 116622, 116755
-recovered pasa_asmbl_23995.p1, internal, 113393, 113493
-recovered pasa_asmbl_23995.p1, internal, 113856, 114077
-recovered pasa_asmbl_23995.p1, internal, 114564, 114709
-recovered pasa_asmbl_23995.p1, internal, 116622, 116755
-recovered pasa_asmbl_23995.p1, internal, 117151, 117283
-recovered pasa_asmbl_23995.p1, internal, 117384, 117590
-recovered pasa_asmbl_23995.p1, internal, 117712, 117840
Valid prediction for GeneMark_model.8361_t
Valid prediction for snap_scaffold_2-snap.3018-T1
Valid prediction for GlimmerHMM_glimmerT_5208-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3783, rend_intergenic: 2917  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 6165, rend_intergenic: 5478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31758, rend_intergenic: 8493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38082, rend_intergenic: 32695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44317, rend_intergenic: 38307  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48539, rend_intergenic: 44489  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62061, rend_intergenic: 51723  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94700, rend_intergenic: 63503  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227857, rend_intergenic: 225884  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237698, rend_intergenic: 231761  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 265442
-exon list size: 942


building trellis

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32.8    
32.9    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.7    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 46 predictions from path traversal
Error with prediction: snap lend_intergenic: 3783, rend_intergenic: 2917  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 6165, rend_intergenic: 5478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31758, rend_intergenic: 8493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38082, rend_intergenic: 32695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44317, rend_intergenic: 38307  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48539, rend_intergenic: 44489  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62061, rend_intergenic: 51723  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94700, rend_intergenic: 63503  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227857, rend_intergenic: 225884  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237698, rend_intergenic: 231761  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support