-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1986

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 508, 528
Couldn't classify 1653, 1661
Sorry, prediction GeneMark_model.109922_t fails validation.
(AGA)	 AG	508-528	GT	GAG
(AGA)	 AG	553-645	GT	CAG
(GAG)	 AG	667-720	GC	AGG
(AGA)	 AG	1626-1631	GT	GGG
(GGG)	 AG	1653-1661	GT	GGG
-recovered GeneMark_model.109922_t, internal, 508, 528
-recovered GeneMark_model.109922_t, internal, 553, 645
-recovered GeneMark_model.109922_t, internal, 667, 720
-recovered GeneMark_model.109922_t, internal, 1626, 1631
-recovered GeneMark_model.109922_t, internal, 1653, 1661

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1692
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support