-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1911

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 489, 827
Couldn't classify 1643, 1753
Sorry, prediction GeneMark_model.109855_t fails validation.
(AGA)	 AG	489-827	GT	GTG
(GGA)	 AG	1051-1140	GT	GAG
(AAG)	 AG	1161-1259	GT	GTG
(GGA)	 AG	1522-1597	GT	TGG
(GTG)	 AG	1643-1753	GT	TGG
-recovered GeneMark_model.109855_t, internal, 489, 827
-recovered GeneMark_model.109855_t, internal, 1051, 1140
-recovered GeneMark_model.109855_t, internal, 1161, 1259
-recovered GeneMark_model.109855_t, internal, 1522, 1597
-recovered GeneMark_model.109855_t, internal, 1643, 1753

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 51, 304
Sorry, prediction snap_scaffold_1911-snap.1-T1 fails validation.
(ACC)	 AG	51-304	GT	CTG
-recovered snap_scaffold_1911-snap.1-T1, internal, 51, 304

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1782
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support