-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1902

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 471, 681
Sorry, prediction snap_scaffold_1902-snap.1-T1 fails validation.
(ATC)	 AG	471-681	GT	AGG
-recovered snap_scaffold_1902-snap.1-T1, internal, 471, 681
Couldn't classify 676, 681
Couldn't classify 1038, 1226
Sorry, prediction GeneMark_model.109848_t fails validation.
(AGA)	 AG	676-681	GT	AGG
(GGA)	 AG	720-776	GT	AGG
(AGA)	 AG	801-1013	GT	AGG
(AGA)	 AG	1038-1226	GT	AGG
-recovered GeneMark_model.109848_t, internal, 676, 681
-recovered GeneMark_model.109848_t, internal, 720, 776
-recovered GeneMark_model.109848_t, internal, 801, 1013
-recovered GeneMark_model.109848_t, internal, 1038, 1226

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1795
-exon list size: 8


building trellis

10.0    
20.0    
30.0    
40.0    
50.0    
60.0    
70.0    
80.0    
90.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support