-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_19/scaffold_19_878680-1089578

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_19-snap.218-T1
Valid prediction for GeneMark_model.77608_t
Valid prediction for snap_scaffold_19-snap.225-T1
Valid prediction for GeneMark_model.77620_t
Valid prediction for Augustus_model.g29763.t1
Valid prediction for snap_scaffold_19-snap.219-T1
Valid prediction for GeneMark_model.77622_t
Valid prediction for snap_scaffold_19-snap.229-T1
Valid prediction for GeneMark_model.77606_t
Valid prediction for GeneMark_model.77638_t
Valid prediction for GeneMark_model.77610_t
Valid prediction for GlimmerHMM_glimmerT_44564-T1
Valid prediction for Augustus_model.g29768.t1
Valid prediction for GeneMark_model.77629_t
Valid prediction for Augustus_model.g29767.t1
Valid prediction for GeneMark_model.77595_t
Valid prediction for snap_scaffold_19-snap.204-T1
Valid prediction for GeneMark_model.77599_t
Valid prediction for GeneMark_model.77602_t
Valid prediction for snap_scaffold_19-snap.220-T1
Valid prediction for snap_scaffold_19-snap.198-T1
Valid prediction for GlimmerHMM_glimmerT_44556-T1
Valid prediction for GeneMark_model.77650_t
Valid prediction for GlimmerHMM_glimmerT_44567-T1
Valid prediction for snap_scaffold_19-snap.188-T1
Valid prediction for GeneMark_model.77627_t
Valid prediction for GeneMark_model.77619_t
Valid prediction for Augustus_model.g29770.t1
Valid prediction for GlimmerHMM_glimmerT_44555-T1
Valid prediction for snap_scaffold_19-snap.200-T1
Valid prediction for snap_scaffold_19-snap.232-T1
Valid prediction for GeneMark_model.77624_t
Valid prediction for snap_scaffold_19-snap.231-T1
Couldn't classify 99759, 100073
Sorry, prediction pasa_asmbl_22023.p1 fails validation.
(GGG)	 CA	99759-100073	GA	ATG
Valid prediction for snap_scaffold_19-snap.202-T1
Couldn't classify 127065, 127078
Couldn't classify 128164, 128215
Sorry, prediction pasa_asmbl_22027.p1 fails validation.
(CGG)	 CA	127065-127078	GT	AGG
(CGA)	 AG	127361-127789	GT	AGG
(GAC)	 AG	128164-128215	GG	GTG
-recovered pasa_asmbl_22027.p1, internal, 127361, 127789
Valid prediction for GeneMark_model.77605_t
Valid prediction for snap_scaffold_19-snap.211-T1
Valid prediction for snap_scaffold_19-snap.224-T1
Valid prediction for snap_scaffold_19-snap.230-T1
Valid prediction for GlimmerHMM_glimmerT_44562-T1
Couldn't classify 105407, 105551
Couldn't classify 109925, 109957
Sorry, prediction pasa_asmbl_22024.p1 fails validation.
(CCC)	 CC	105407-105551	GT	AGG
(AGA)	 AG	106749-106841	GT	AGG
(CCA)	 AG	107002-107063	GT	AGG
(GAG)	 AG	107169-107234	GT	AGG
(GCC)	 AG	108783-108848	GC	AGG
(GAG)	 AG	109186-109230	GT	AGG
(GAG)	 AG	109925-109957	GT	GGG
-recovered pasa_asmbl_22024.p1, internal, 106749, 106841
-recovered pasa_asmbl_22024.p1, internal, 107002, 107063
-recovered pasa_asmbl_22024.p1, internal, 107169, 107234
-recovered pasa_asmbl_22024.p1, internal, 108783, 108848
-recovered pasa_asmbl_22024.p1, internal, 109186, 109230
-recovered pasa_asmbl_22024.p1, internal, 109925, 109957
Valid prediction for Augustus_model.g29771.t1
Valid prediction for GeneMark_model.77641_t
Valid prediction for GeneMark_model.77589_t
Valid prediction for GeneMark_model.77643_t
Couldn't classify 156940, 157598
Couldn't classify 158310, 158413
Sorry, prediction pasa_asmbl_22029.p1 fails validation.
(CCT)	 NC	156940-157598	GT	AGG
(TCT)	 AG	157752-157921	GT	CGG
(GAA)	 AG	158310-158413	GT	GGG
-recovered pasa_asmbl_22029.p1, internal, 157752, 157921
-recovered pasa_asmbl_22029.p1, internal, 158310, 158413
Valid prediction for snap_scaffold_19-snap.191-T1
Valid prediction for GeneMark_model.77597_t
Valid prediction for GeneMark_model.77633_t
Valid prediction for snap_scaffold_19-snap.216-T1
Valid prediction for snap_scaffold_19-snap.228-T1
Valid prediction for GeneMark_model.77647_t
Valid prediction for GeneMark_model.77635_t
Valid prediction for GlimmerHMM_glimmerT_44568-T1
Couldn't classify 121528, 121659
Sorry, prediction pasa_asmbl_22026.p1 fails validation.
(GAG)	 CA	121528-121659	GT	AGG
(GGC)	 AG	122393-122628	GT	AGG
(GGG)	 AG	123478-123613	GT	TGG
(TAC)	 AG	123961-124107	GT	AGG
(GCG)	 AG	124304-124668	GT	AGG
(AGT)	 AG	124967-125110	GT	CAG
(ATA)	 AG	125329-125485	AG	GAA
-recovered pasa_asmbl_22026.p1, terminal, 125329, 125485
-recovered pasa_asmbl_22026.p1, internal, 122393, 122628
-recovered pasa_asmbl_22026.p1, internal, 123478, 123613
-recovered pasa_asmbl_22026.p1, internal, 123961, 124107
-recovered pasa_asmbl_22026.p1, internal, 124304, 124668
-recovered pasa_asmbl_22026.p1, internal, 124967, 125110
Valid prediction for snap_scaffold_19-snap.199-T1
Valid prediction for snap_scaffold_19-snap.208-T1
Valid prediction for GlimmerHMM_glimmerT_44566-T1
Valid prediction for GeneMark_model.77614_t
Valid prediction for GeneMark_model.77616_t
Valid prediction for GlimmerHMM_glimmerT_44565-T1
Valid prediction for GlimmerHMM_glimmerT_44559-T1
Valid prediction for GeneMark_model.77636_t
Valid prediction for GeneMark_model.77593_t
Couldn't classify 115847, 116095
Couldn't classify 116241, 116303
Sorry, prediction pasa_asmbl_22724.p1 fails validation.
(CCA)	 TT	115847-116095	GT	AGG
(ACT)	 AG	116241-116303	GT	AGG
-recovered pasa_asmbl_22724.p1, internal, 116241, 116303
Valid prediction for GeneMark_model.77631_t
Valid prediction for Augustus_model.g29769.t1
Valid prediction for GeneMark_model.77648_t
Valid prediction for GeneMark_model.77604_t
Valid prediction for GeneMark_model.77607_t
Valid prediction for Augustus_model.g29762.t1
Valid prediction for GeneMark_model.77591_t
Couldn't classify 116850, 116884
Couldn't classify 119503, 119939
Sorry, prediction pasa_asmbl_22025.p1 fails validation.
(AAG)	 GG	116850-116884	GT	AAG
(GCT)	 AG	117253-117487	GT	AGG
(GAT)	 AG	117651-117713	GT	AGG
(CAA)	 AG	118043-118187	GT	AGG
(CTC)	 AG	119503-119939	TC	CAT
-recovered pasa_asmbl_22025.p1, internal, 117253, 117487
-recovered pasa_asmbl_22025.p1, internal, 117651, 117713
-recovered pasa_asmbl_22025.p1, internal, 118043, 118187
Valid prediction for snap_scaffold_19-snap.196-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.77639_t
Valid prediction for HiQ_model.g29764.t1
Valid prediction for GeneMark_model.77644_t
Valid prediction for GeneMark_model.77615_t
Valid prediction for GeneMark_model.77628_t
Valid prediction for snap_scaffold_19-snap.194-T1
Valid prediction for GeneMark_model.77630_t
Valid prediction for GeneMark_model.77590_t
Valid prediction for GeneMark_model.77594_t
Valid prediction for Augustus_model.g29773.t1
Valid prediction for GeneMark_model.77617_t
Valid prediction for GeneMark_model.77637_t
Couldn't classify 45447, 45522
Sorry, prediction pasa_asmbl_21217.p1 fails validation.
(TTC)	 CA	45447-45522	GT	TGG
(ACC)	 AG	46172-46357	GT	AGG
(ACT)	 AG	46657-46880	GT	ACG
(GCG)	 AG	47116-47293	GT	GAG
(GAG)	 AG	48012-48173	GT	GGG
(GTG)	 AG	48281-48397	GT	GGG
(GAC)	 AG	48611-48814	GT	ACG
(GAT)	 AG	49247-49422	AG	GAA
-recovered pasa_asmbl_21217.p1, terminal, 49247, 49422
-recovered pasa_asmbl_21217.p1, internal, 46172, 46357
-recovered pasa_asmbl_21217.p1, internal, 46657, 46880
-recovered pasa_asmbl_21217.p1, internal, 47116, 47293
-recovered pasa_asmbl_21217.p1, internal, 48012, 48173
-recovered pasa_asmbl_21217.p1, internal, 48281, 48397
-recovered pasa_asmbl_21217.p1, internal, 48611, 48814
Valid prediction for GlimmerHMM_glimmerT_44570-T1
Valid prediction for GeneMark_model.77649_t
Valid prediction for snap_scaffold_19-snap.193-T1
Valid prediction for snap_scaffold_19-snap.210-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GeneMark_model.77640_t
Valid prediction for snap_scaffold_19-snap.201-T1
Valid prediction for GeneMark_model.77600_t
Valid prediction for snap_scaffold_19-snap.209-T1
Valid prediction for GeneMark_model.77611_t
Valid prediction for snap_scaffold_19-snap.206-T1
Valid prediction for GeneMark_model.77601_t
Valid prediction for GlimmerHMM_glimmerT_44563-T1
Valid prediction for snap_scaffold_19-snap.192-T1
Valid prediction for GeneMark_model.77598_t
Valid prediction for GeneMark_model.77632_t
Valid prediction for GeneMark_model.77592_t
Valid prediction for snap_scaffold_19-snap.203-T1
Couldn't classify 23404, 23525
Sorry, prediction pasa_asmbl_21222.p1 fails validation.
(ATG)	 CC	22115-22283	GT	TGG
(GTA)	 AG	22625-22660	GT	TGG
(GGT)	 AG	23404-23525	CT	CGC
-recovered pasa_asmbl_21222.p1, initial, 22115, 22283
-recovered pasa_asmbl_21222.p1, internal, 22625, 22660
Valid prediction for Augustus_model.g29774.t1
Valid prediction for snap_scaffold_19-snap.189-T1
Valid prediction for snap_scaffold_19-snap.205-T1
Valid prediction for GlimmerHMM_glimmerT_44571-T1
Valid prediction for snap_scaffold_19-snap.195-T1
Valid prediction for snap_scaffold_19-snap.207-T1
Valid prediction for GlimmerHMM_glimmerT_44561-T1
Valid prediction for GeneMark_model.77609_t
Valid prediction for GlimmerHMM_glimmerT_44557-T1
Valid prediction for GeneMark_model.77603_t
Valid prediction for GlimmerHMM_glimmerT_44560-T1
Valid prediction for snap_scaffold_19-snap.227-T1
Valid prediction for GeneMark_model.77625_t
Valid prediction for snap_scaffold_19-snap.214-T1
Valid prediction for snap_scaffold_19-snap.212-T1
Valid prediction for GeneMark_model.77596_t
Valid prediction for Augustus_model.g29766.t1
Valid prediction for snap_scaffold_19-snap.226-T1
Valid prediction for Augustus_model.g29772.t1
Couldn't classify 36448, 36486
Sorry, prediction CodingQuarry_transcript_25534-T1 fails validation.
(ATG)	 CG	35925-36045	GT	GGG
(GAA)	 AG	36448-36486	AA	TGA
(GCC)	 AG	36956-37121	GT	AAG
(GTG)	 AG	37781-37838	CG	GAC
-recovered CodingQuarry_transcript_25534-T1, initial, 35925, 36045
-recovered CodingQuarry_transcript_25534-T1, terminal, 37781, 37838
-recovered CodingQuarry_transcript_25534-T1, internal, 36956, 37121
Valid prediction for GeneMark_model.77618_t
Valid prediction for Augustus_model.g29775.t1
Valid prediction for GeneMark_model.77642_t
Valid prediction for snap_scaffold_19-snap.221-T1
Couldn't classify 19257, 19442
Couldn't classify 20900, 20928
Sorry, prediction pasa_asmbl_21223.p1 fails validation.
(CCT)	 GT	19257-19442	GT	ACG
(GAT)	 AG	19798-19975	GT	TAG
(AGA)	 AG	20256-20393	GT	AGG
(CGA)	 AG	20900-20928	AC	AGA
-recovered pasa_asmbl_21223.p1, internal, 19798, 19975
-recovered pasa_asmbl_21223.p1, internal, 20256, 20393
Valid prediction for GlimmerHMM_glimmerT_44569-T1
Couldn't classify 26558, 26837
Couldn't classify 28296, 28399
Sorry, prediction pasa_asmbl_21219.p1 fails validation.
(CTG)	 AC	26558-26837	GT	CGG
(TCA)	 AG	28296-28399	CA	ACC
Valid prediction for snap_scaffold_19-snap.190-T1
Valid prediction for GeneMark_model.77612_t
Valid prediction for GeneMark_model.77623_t
Valid prediction for snap_scaffold_19-snap.223-T1
Valid prediction for snap_scaffold_19-snap.197-T1
Valid prediction for snap_scaffold_19-snap.215-T1
Valid prediction for snap_scaffold_19-snap.213-T1
Valid prediction for GeneMark_model.77613_t
Valid prediction for Augustus_model.g29776.t1
Valid prediction for GlimmerHMM_glimmerT_44572-T1
Valid prediction for GlimmerHMM_glimmerT_44573-T1
Valid prediction for GeneMark_model.77626_t
Valid prediction for GeneMark_model.77645_t
Valid prediction for GlimmerHMM_glimmerT_44558-T1
Valid prediction for GeneMark_model.77621_t
Valid prediction for GeneMark_model.77588_t
Valid prediction for GeneMark_model.77634_t
Valid prediction for snap_scaffold_19-snap.217-T1
Valid prediction for snap_scaffold_19-snap.222-T1
Valid prediction for Augustus_model.g29765.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9720, rend_intergenic: 8137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24194, rend_intergenic: 13535  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25837, rend_intergenic: 25124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31540, rend_intergenic: 27192  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36537, rend_intergenic: 34709  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42668, rend_intergenic: 40596  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71107, rend_intergenic: 46686  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100124, rend_intergenic: 82174  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103447, rend_intergenic: 100402  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125485, rend_intergenic: 105325  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132685, rend_intergenic: 132508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137574, rend_intergenic: 135646  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166790, rend_intergenic: 161478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184384, rend_intergenic: 170443  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208452, rend_intergenic: 189816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 210899
-exon list size: 1000


building trellis

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43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 25 predictions from path traversal
Error with prediction: snap lend_intergenic: 9720, rend_intergenic: 8137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24194, rend_intergenic: 13535  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25837, rend_intergenic: 25124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31540, rend_intergenic: 27192  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36537, rend_intergenic: 34709  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42668, rend_intergenic: 40596  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71107, rend_intergenic: 46686  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100124, rend_intergenic: 82174  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103447, rend_intergenic: 100402  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125485, rend_intergenic: 105325  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132685, rend_intergenic: 132508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137574, rend_intergenic: 135646  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166790, rend_intergenic: 161478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184384, rend_intergenic: 170443  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208452, rend_intergenic: 189816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 14 predictions persist after filtering for low support