-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_19/scaffold_19_5251527-5501464 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.78887_t Valid prediction for GeneMark_model.78843_t Valid prediction for CodingQuarry_transcript_25606-T1 Valid prediction for snap_scaffold_19-snap.1162-T1 Valid prediction for GeneMark_model.78837_t Valid prediction for Augustus_model.g30091.t1 Valid prediction for snap_scaffold_19-snap.1130-T1 Valid prediction for GeneMark_model.78864_t Valid prediction for HiQ_model.g30097.t1 Valid prediction for snap_scaffold_19-snap.1172-T1 Valid prediction for snap_scaffold_19-snap.1159-T1 Valid prediction for GeneMark_model.78880_t Couldn't classify 118339, 118418 Couldn't classify 122107, 122213 Sorry, prediction pasa_asmbl_22171.p1 fails validation. (CGT) AT 118339-118418 GT TGG (CAG) AG 118946-118992 GT GGG (ATT) AG 119087-119131 GT TAG (AGC) AG 119523-119620 GT CAG (ACA) AG 120047-120128 GT TGG (TGT) AG 120403-120503 GT AGG (TTG) AG 120725-120840 GT AGG (AGA) AG 121307-121410 GT AGG (CGT) AG 121747-121836 GT TGG (GCG) AG 122107-122213 CC CCC -recovered pasa_asmbl_22171.p1, internal, 118946, 118992 -recovered pasa_asmbl_22171.p1, internal, 119087, 119131 -recovered pasa_asmbl_22171.p1, internal, 119523, 119620 -recovered pasa_asmbl_22171.p1, internal, 120047, 120128 -recovered pasa_asmbl_22171.p1, internal, 120403, 120503 -recovered pasa_asmbl_22171.p1, internal, 120725, 120840 -recovered pasa_asmbl_22171.p1, internal, 121307, 121410 -recovered pasa_asmbl_22171.p1, internal, 121747, 121836 Valid prediction for snap_scaffold_19-snap.1138-T1 Valid prediction for Augustus_model.g30083.t1 Valid prediction for GlimmerHMM_glimmerT_45129-T1 Valid prediction for GeneMark_model.78869_t Valid prediction for snap_scaffold_19-snap.1164-T1 Valid prediction for GeneMark_model.78885_t Valid prediction for snap_scaffold_19-snap.1139-T1 Valid prediction for snap_scaffold_19-snap.1150-T1 Valid prediction for GlimmerHMM_glimmerT_45124-T1 Valid prediction for Augustus_model.g30095.t1 Valid prediction for snap_scaffold_19-snap.1154-T1 Valid prediction for GeneMark_model.78889_t Valid prediction for snap_scaffold_19-snap.1157-T1 Valid prediction for Augustus_model.g30090.t1 Valid prediction for GlimmerHMM_glimmerT_45132-T1 Valid prediction for GlimmerHMM_glimmerT_45133-T1 Valid prediction for GeneMark_model.78850_t Valid prediction for snap_scaffold_19-snap.1142-T1 Valid prediction for Augustus_model.g30110.t1 Couldn't classify 122304, 122311 Sorry, prediction pasa_asmbl_22173.p2 fails validation. (CAG) GT 122304-122311 GT AGG (TGA) AG 122426-122501 GT AGG (CCA) AG 122639-122698 GT AGG (AAA) AG 123160-123267 GT GGG (GGA) AG 123415-123531 GT TGG (AGT) AG 123946-123972 GT AGG (CTG) AG 124245-124272 GT AGG (CTG) AG 124845-124879 GT AGG (CAG) AG 124956-125090 GT AGG (GCG) AG 125216-125296 GT AGG (ATT) AG 125496-125747 CC GAC -recovered pasa_asmbl_22173.p2, terminal, 125496, 125747 -recovered pasa_asmbl_22173.p2, internal, 122426, 122501 -recovered pasa_asmbl_22173.p2, internal, 122639, 122698 -recovered pasa_asmbl_22173.p2, internal, 123160, 123267 -recovered pasa_asmbl_22173.p2, internal, 123415, 123531 -recovered pasa_asmbl_22173.p2, internal, 123946, 123972 -recovered pasa_asmbl_22173.p2, internal, 124245, 124272 -recovered pasa_asmbl_22173.p2, internal, 124845, 124879 -recovered pasa_asmbl_22173.p2, internal, 124956, 125090 -recovered pasa_asmbl_22173.p2, internal, 125216, 125296 Valid prediction for GlimmerHMM_glimmerT_45125-T1 Valid prediction for GeneMark_model.78861_t Valid prediction for GeneMark_model.78891_t Valid prediction for Augustus_model.g30102.t1 Valid prediction for GeneMark_model.78832_t Valid prediction for snap_scaffold_19-snap.1163-T1 Valid prediction for GeneMark_model.78867_t Valid prediction for Augustus_model.g30087.t1 Valid prediction for snap_scaffold_19-snap.1177-T1 Valid prediction for snap_scaffold_19-snap.1136-T1 Valid prediction for GlimmerHMM_glimmerT_45151-T1 Valid prediction for GlimmerHMM_glimmerT_45139-T1 Couldn't classify 133387, 133569 Couldn't classify 133938, 134068 Sorry, prediction CodingQuarry_transcript_25603-T1 fails validation. (ATG) AG 133047-133206 GT TGG (GGG) AG 133387-133569 AT CCA (CAT) TG 133938-134068 GT AGG (GTT) AG 134198-134269 GT AAG (CCA) AG 134595-134690 GT AGG (GTC) AG 134847-134925 GT AGG (ACA) AG 135477-135511 GT AGG (GAT) AG 135700-135726 GT TGG (GGT) AG 135969-136054 GT AGG (GGC) AG 136191-136302 GT CTG (GGA) AG 136385-136459 GT AGG (ACT) AG 136674-136716 GT AGG (GAG) AG 136865-136967 GT CGG (CGG) AG 137062-137131 GT AGG (CTG) AG 137264-137344 GT TGG (ATT) AG 137435-137493 GT AAG (ACC) AG 137709-137793 AC GAA -recovered CodingQuarry_transcript_25603-T1, initial, 133047, 133206 -recovered CodingQuarry_transcript_25603-T1, terminal, 137709, 137793 -recovered CodingQuarry_transcript_25603-T1, internal, 133047, 133206 -recovered CodingQuarry_transcript_25603-T1, internal, 134198, 134269 -recovered CodingQuarry_transcript_25603-T1, internal, 134595, 134690 -recovered CodingQuarry_transcript_25603-T1, internal, 134847, 134925 -recovered CodingQuarry_transcript_25603-T1, internal, 135477, 135511 -recovered CodingQuarry_transcript_25603-T1, internal, 135700, 135726 -recovered CodingQuarry_transcript_25603-T1, internal, 135969, 136054 -recovered CodingQuarry_transcript_25603-T1, internal, 136191, 136302 -recovered CodingQuarry_transcript_25603-T1, internal, 136385, 136459 -recovered CodingQuarry_transcript_25603-T1, internal, 136674, 136716 -recovered CodingQuarry_transcript_25603-T1, internal, 136865, 136967 -recovered CodingQuarry_transcript_25603-T1, internal, 137062, 137131 -recovered CodingQuarry_transcript_25603-T1, internal, 137264, 137344 -recovered CodingQuarry_transcript_25603-T1, internal, 137435, 137493 Valid prediction for snap_scaffold_19-snap.1127-T1 Valid prediction for GlimmerHMM_glimmerT_45127-T1 Couldn't classify 61852, 62023 Sorry, prediction pasa_asmbl_22168.p1 fails validation. (GGG) CC 61852-62023 GT AGG (AGG) AG 62267-62320 GT AGG (GGC) AG 62420-62500 GT TTG (ATT) AG 62801-62865 AC AGA -recovered pasa_asmbl_22168.p1, terminal, 62801, 62865 -recovered pasa_asmbl_22168.p1, internal, 62267, 62320 -recovered pasa_asmbl_22168.p1, internal, 62420, 62500 Valid prediction for Augustus_model.g30106.t1 Valid prediction for GlimmerHMM_glimmerT_45146-T1 Valid prediction for GlimmerHMM_glimmerT_45152-T1 Valid prediction for snap_scaffold_19-snap.1137-T1 Valid prediction for snap_scaffold_19-snap.1151-T1 Valid prediction for snap_scaffold_19-snap.1126-T1 Valid prediction for snap_scaffold_19-snap.1148-T1 Valid prediction for Augustus_model.g30101.t1 Valid prediction for Augustus_model.g30085.t1 Valid prediction for Augustus_model.g30111.t1 Valid prediction for GlimmerHMM_glimmerT_45145-T1 Valid prediction for GeneMark_model.78830_t Valid prediction for GlimmerHMM_glimmerT_45150-T1 Valid prediction for snap_scaffold_19-snap.1129-T1 Valid prediction for Augustus_model.g30088.t1 Valid prediction for GeneMark_model.78893_t Valid prediction for GeneMark_model.78847_t Valid prediction for GlimmerHMM_glimmerT_45131-T1 Valid prediction for GeneMark_model.78855_t Valid prediction for GeneMark_model.78873_t Valid prediction for GeneMark_model.78881_t Valid prediction for GeneMark_model.78851_t Valid prediction for GeneMark_model.78883_t Valid prediction for GeneMark_model.78854_t Valid prediction for snap_scaffold_19-snap.1132-T1 Valid prediction for GeneMark_model.78846_t Valid prediction for GeneMark_model.78871_t Valid prediction for GeneMark_model.78853_t Valid prediction for GeneMark_model.78877_t Valid prediction for GeneMark_model.78849_t Valid prediction for snap_scaffold_19-snap.1171-T1 Valid prediction for snap_scaffold_19-snap.1174-T1 Valid prediction for GeneMark_model.78835_t Valid prediction for GeneMark_model.78859_t Valid prediction for snap_scaffold_19-snap.1168-T1 Valid prediction for GlimmerHMM_glimmerT_45140-T1 Valid prediction for Augustus_model.g30086.t1 Valid prediction for GlimmerHMM_glimmerT_45148-T1 Valid prediction for snap_scaffold_19-snap.1176-T1 Valid prediction for Augustus_model.g30089.t1 Valid prediction for GeneMark_model.78845_t Valid prediction for snap_scaffold_19-snap.1146-T1 Valid prediction for GeneMark_model.78842_t Valid prediction for GlimmerHMM_glimmerT_45134-T1 Valid prediction for GeneMark_model.78857_t Valid prediction for GlimmerHMM_glimmerT_45142-T1 Valid prediction for pasa_asmbl_22746.p2 Valid prediction for snap_scaffold_19-snap.1143-T1 Valid prediction for GlimmerHMM_glimmerT_45154-T1 Valid prediction for Augustus_model.g30104.t1 Valid prediction for GlimmerHMM_glimmerT_45157-T1 Valid prediction for snap_scaffold_19-snap.1141-T1 Valid prediction for GeneMark_model.78833_t Valid prediction for Augustus_model.g30112.t1 Couldn't classify 212454, 212566 Sorry, prediction CodingQuarry_transcript_25607-T1 fails validation. (ATG) AG 210232-210243 GT CAG (GCG) AG 211338-211447 GT AGG (GAA) AG 212021-212146 GT AAG (GTT) TG 212454-212566 GT AGG (TGT) AG 212653-212834 GT AGG (GTG) AG 213119-213283 GA GAG -recovered CodingQuarry_transcript_25607-T1, initial, 210232, 210243 -recovered CodingQuarry_transcript_25607-T1, terminal, 213119, 213283 -recovered CodingQuarry_transcript_25607-T1, internal, 210232, 210243 -recovered CodingQuarry_transcript_25607-T1, internal, 211338, 211447 -recovered CodingQuarry_transcript_25607-T1, internal, 212021, 212146 -recovered CodingQuarry_transcript_25607-T1, internal, 212653, 212834 Valid prediction for GeneMark_model.78839_t Valid prediction for snap_scaffold_19-snap.1161-T1 Valid prediction for GeneMark_model.78876_t Valid prediction for HiQ_model.g30108.t1 Valid prediction for snap_scaffold_19-snap.1135-T1 Valid prediction for GeneMark_model.78841_t Valid prediction for GlimmerHMM_glimmerT_45128-T1 Valid prediction for pasa_asmbl_22175.p1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 204630, 205022 Sorry, prediction pasa_asmbl_22166.p1 fails validation. (CCC) TA 204630-205022 CT AAC Valid prediction for Augustus_model.g30103.t1 Couldn't classify 235181, 235257 Sorry, prediction pasa_asmbl_21356.p1 fails validation. (ATG) CG 229912-229923 GT AGG (GCC) AG 230604-230690 GT CGG (AAT) AG 230805-230879 GT AGG (CTG) AG 231206-231274 GT AGG (GTT) AG 232416-232497 GT AGG (GTG) AG 232820-232961 GT AAG (GTT) AG 233221-233305 GT ATG (ATT) AG 233611-233736 GT ATG (ACA) AG 234047-234164 GT AGG (GGC) AG 234464-234594 GT AGG (GAG) AG 234631-234734 GT GTG (GGA) AG 234828-234931 GT GCG (CTT) AG 235013-235090 GT AGG (GAG) AG 235181-235257 GT AGG -recovered pasa_asmbl_21356.p1, initial, 229912, 229923 -recovered pasa_asmbl_21356.p1, internal, 230604, 230690 -recovered pasa_asmbl_21356.p1, internal, 230805, 230879 -recovered pasa_asmbl_21356.p1, internal, 231206, 231274 -recovered pasa_asmbl_21356.p1, internal, 232416, 232497 -recovered pasa_asmbl_21356.p1, internal, 232820, 232961 -recovered pasa_asmbl_21356.p1, internal, 233221, 233305 -recovered pasa_asmbl_21356.p1, internal, 233611, 233736 -recovered pasa_asmbl_21356.p1, internal, 234047, 234164 -recovered pasa_asmbl_21356.p1, internal, 234464, 234594 -recovered pasa_asmbl_21356.p1, internal, 234631, 234734 -recovered pasa_asmbl_21356.p1, internal, 234828, 234931 -recovered pasa_asmbl_21356.p1, internal, 235013, 235090 -recovered pasa_asmbl_21356.p1, internal, 235181, 235257 Valid prediction for GlimmerHMM_glimmerT_45130-T1 Valid prediction for Augustus_model.g30098.t1 Valid prediction for snap_scaffold_19-snap.1165-T1 Valid prediction for GeneMark_model.78836_t Valid prediction for GeneMark_model.78860_t Valid prediction for Augustus_model.g30094.t1 Valid prediction for GeneMark_model.78852_t Valid prediction for snap_scaffold_19-snap.1128-T1 Valid prediction for snap_scaffold_19-snap.1153-T1 Valid prediction for Augustus_model.g30093.t1 Valid prediction for pasa_asmbl_21372.p1 Couldn't classify 60486, 60557 Sorry, prediction pasa_asmbl_21368.p1 fails validation. (CCT) CC 60486-60557 GT AGG (TAC) AG 60665-60755 GT AGG (ACT) AG 60939-61208 GT AGG (CGG) AG 61416-61555 GA AAG add_exon() Sorry, pasa_asmbl_21368.p1 60939-61208-terminal-1 is invalid. -recovered pasa_asmbl_21368.p1, terminal, 60939, 61208 -recovered pasa_asmbl_21368.p1, terminal, 61416, 61555 -recovered pasa_asmbl_21368.p1, internal, 60665, 60755 -recovered pasa_asmbl_21368.p1, internal, 60939, 61208 Valid prediction for GeneMark_model.78863_t Valid prediction for GeneMark_model.78838_t Valid prediction for GeneMark_model.78875_t Valid prediction for GlimmerHMM_glimmerT_45123-T1 Valid prediction for HiQ_model.g30099.t1 Valid prediction for pasa_asmbl_21363.p2 Valid prediction for GeneMark_model.78879_t Valid prediction for snap_scaffold_19-snap.1155-T1 Couldn't classify 105895, 106336 Sorry, prediction pasa_asmbl_21364.p1 fails validation. (TCC) AC 105895-106336 GT AGG (AAG) AG 106752-107521 TT AGT -recovered pasa_asmbl_21364.p1, terminal, 106752, 107521 Valid prediction for GeneMark_model.78888_t Valid prediction for HiQ_model.g30107.t1 Valid prediction for GeneMark_model.78882_t Valid prediction for snap_scaffold_19-snap.1140-T1 Valid prediction for snap_scaffold_19-snap.1145-T1 Valid prediction for GeneMark_model.78840_t Valid prediction for GeneMark_model.78831_t Valid prediction for Augustus_model.g30084.t1 Valid prediction for GeneMark_model.78856_t Valid prediction for GlimmerHMM_glimmerT_45138-T1 Valid prediction for pasa_asmbl_21355.p1 Valid prediction for GeneMark_model.78865_t Valid prediction for snap_scaffold_19-snap.1167-T1 Valid prediction for snap_scaffold_19-snap.1169-T1 Valid prediction for Augustus_model.g30096.t1 Valid prediction for snap_scaffold_19-snap.1134-T1 Valid prediction for GeneMark_model.78829_t Valid prediction for GeneMark_model.78884_t Valid prediction for GlimmerHMM_glimmerT_45147-T1 Valid prediction for GeneMark_model.78868_t Valid prediction for Augustus_model.g30100.t1 Valid prediction for Augustus_model.g30109.t1 Valid prediction for snap_scaffold_19-snap.1158-T1 Valid prediction for snap_scaffold_19-snap.1175-T1 Valid prediction for snap_scaffold_19-snap.1144-T1 Valid prediction for GeneMark_model.78866_t Valid prediction for GeneMark_model.78848_t Valid prediction for snap_scaffold_19-snap.1149-T1 Valid prediction for GeneMark_model.78862_t Valid prediction for GlimmerHMM_glimmerT_45143-T1 Valid prediction for HiQ_model.g30092.t1 Valid prediction for GlimmerHMM_glimmerT_45136-T1 Valid prediction for GlimmerHMM_glimmerT_45153-T1 Valid prediction for CodingQuarry_transcript_25601-T1 Valid prediction for GlimmerHMM_glimmerT_45141-T1 Valid prediction for GeneMark_model.78874_t Valid prediction for GlimmerHMM_glimmerT_45137-T1 Valid prediction for GlimmerHMM_glimmerT_45126-T1 Valid prediction for GeneMark_model.78844_t Valid prediction for GeneMark_model.78886_t Valid prediction for Augustus_model.g30105.t1 Valid prediction for GlimmerHMM_glimmerT_45144-T1 Valid prediction for GeneMark_model.78870_t Valid prediction for GlimmerHMM_glimmerT_45135-T1 Valid prediction for GlimmerHMM_glimmerT_45156-T1 Valid prediction for snap_scaffold_19-snap.1152-T1 Valid prediction for GeneMark_model.78892_t Valid prediction for GeneMark_model.78878_t Couldn't classify 154446, 154573 Couldn't classify 154616, 154837 Sorry, prediction CodingQuarry_transcript_25602-T1 fails validation. (ATG) GT 152119-152207 GT CGG (GTA) AG 152559-152713 GT GGG (GTG) AG 153526-153694 GT ATG (CTC) AG 154168-154270 GT AGG (CTG) AG 154446-154573 TA GAT (CAC) GA 154616-154837 GT GGG (TTT) AG 155307-155524 GT TGG (ATA) AG 155641-155749 GT AGG (GCA) AG 156387-156638 GT AGG (GCA) AG 158710-158851 TT GAT -recovered CodingQuarry_transcript_25602-T1, initial, 152119, 152207 -recovered CodingQuarry_transcript_25602-T1, terminal, 158710, 158851 -recovered CodingQuarry_transcript_25602-T1, internal, 152559, 152713 -recovered CodingQuarry_transcript_25602-T1, internal, 153526, 153694 -recovered CodingQuarry_transcript_25602-T1, internal, 154168, 154270 -recovered CodingQuarry_transcript_25602-T1, internal, 155307, 155524 -recovered CodingQuarry_transcript_25602-T1, internal, 155641, 155749 -recovered CodingQuarry_transcript_25602-T1, internal, 156387, 156638 Valid prediction for CodingQuarry_transcript_25604-T1 Valid prediction for snap_scaffold_19-snap.1133-T1 Valid prediction for GeneMark_model.78872_t Valid prediction for snap_scaffold_19-snap.1156-T1 Valid prediction for snap_scaffold_19-snap.1125-T1 Valid prediction for CodingQuarry_transcript_25600-T1 Valid prediction for GlimmerHMM_glimmerT_45155-T1 Valid prediction for CodingQuarry_transcript_25605-T1 Valid prediction for GeneMark_model.78890_t Valid prediction for snap_scaffold_19-snap.1131-T1 Valid prediction for snap_scaffold_19-snap.1147-T1 Valid prediction for snap_scaffold_19-snap.1166-T1 Valid prediction for snap_scaffold_19-snap.1160-T1 Valid prediction for snap_scaffold_19-snap.1173-T1 Valid prediction for GeneMark_model.78858_t Valid prediction for GlimmerHMM_glimmerT_45149-T1 Valid prediction for Augustus_model.g30082.t1 Valid prediction for snap_scaffold_19-snap.1170-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 20027, rend_intergenic: 7563 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 37142, rend_intergenic: 21194 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41274, rend_intergenic: 39936 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42872, rend_intergenic: 41671 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73106, rend_intergenic: 48510 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90511, rend_intergenic: 77156 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97820, rend_intergenic: 91487 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111372, rend_intergenic: 102723 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125011, rend_intergenic: 114512 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127527, rend_intergenic: 127045 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131123, rend_intergenic: 127777 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139066, rend_intergenic: 132975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145275, rend_intergenic: 141508 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157960, rend_intergenic: 151550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166575, rend_intergenic: 158671 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184815, rend_intergenic: 171146 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 196775, rend_intergenic: 191850 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201166, rend_intergenic: 196804 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218912, rend_intergenic: 218753 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241101, rend_intergenic: 238233 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 249938 -exon list size: 1020 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 46 predictions from path traversal Error with prediction: snap lend_intergenic: 20027, rend_intergenic: 7563 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 37142, rend_intergenic: 21194 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41274, rend_intergenic: 39936 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42872, rend_intergenic: 41671 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73106, rend_intergenic: 48510 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90511, rend_intergenic: 77156 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97820, rend_intergenic: 91487 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111372, rend_intergenic: 102723 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125011, rend_intergenic: 114512 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127527, rend_intergenic: 127045 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131123, rend_intergenic: 127777 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139066, rend_intergenic: 132975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145275, rend_intergenic: 141508 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157960, rend_intergenic: 151550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166575, rend_intergenic: 158671 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184815, rend_intergenic: 171146 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 196775, rend_intergenic: 191850 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201166, rend_intergenic: 196804 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218912, rend_intergenic: 218753 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241101, rend_intergenic: 238233 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 39 predictions persist after filtering for low support