-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_19/scaffold_19_2054380-2288812

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g29852.t1
Valid prediction for GeneMark_model.77966_t
Couldn't classify 225779, 226201
Sorry, prediction pasa_asmbl_22059.p1 fails validation.
(CCA)	 CT	225779-226201	CC	AGC
Valid prediction for snap_scaffold_19-snap.463-T1
Valid prediction for GeneMark_model.77907_t
Valid prediction for snap_scaffold_19-snap.480-T1
Valid prediction for Augustus_model.g29842.t1
Valid prediction for GeneMark_model.77916_t
Valid prediction for Augustus_model.g29840.t1
Valid prediction for GeneMark_model.77958_t
Valid prediction for GeneMark_model.77934_t
Valid prediction for GeneMark_model.77914_t
Valid prediction for GeneMark_model.77950_t
Valid prediction for snap_scaffold_19-snap.473-T1
Valid prediction for snap_scaffold_19-snap.461-T1
Valid prediction for snap_scaffold_19-snap.490-T1
Valid prediction for snap_scaffold_19-snap.474-T1
Valid prediction for GeneMark_model.77910_t
Valid prediction for Augustus_model.g29848.t1
Valid prediction for snap_scaffold_19-snap.459-T1
Valid prediction for snap_scaffold_19-snap.446-T1
Valid prediction for GlimmerHMM_glimmerT_44716-T1
Couldn't classify 25344, 26015
Sorry, prediction pasa_asmbl_22055.p1 fails validation.
(CTT)	 GG	25344-26015	AG	CCA
Valid prediction for GeneMark_model.77962_t
Valid prediction for GeneMark_model.77937_t
Valid prediction for Augustus_model.g29845.t1
Valid prediction for GlimmerHMM_glimmerT_44727-T1
Valid prediction for GlimmerHMM_glimmerT_44704-T1
Valid prediction for GeneMark_model.77948_t
Valid prediction for snap_scaffold_19-snap.445-T1
Valid prediction for GlimmerHMM_glimmerT_44731-T1
Valid prediction for snap_scaffold_19-snap.465-T1
Valid prediction for snap_scaffold_19-snap.484-T1
Valid prediction for GeneMark_model.77894_t
Valid prediction for GeneMark_model.77953_t
Valid prediction for GeneMark_model.77951_t
Valid prediction for snap_scaffold_19-snap.454-T1
Valid prediction for snap_scaffold_19-snap.467-T1
Valid prediction for GeneMark_model.77900_t
Valid prediction for GlimmerHMM_glimmerT_44708-T1
Valid prediction for snap_scaffold_19-snap.455-T1
Valid prediction for snap_scaffold_19-snap.460-T1
Valid prediction for GeneMark_model.77931_t
Valid prediction for snap_scaffold_19-snap.479-T1
Valid prediction for snap_scaffold_19-snap.472-T1
Valid prediction for GeneMark_model.77912_t
Valid prediction for GlimmerHMM_glimmerT_44712-T1
Valid prediction for snap_scaffold_19-snap.448-T1
Valid prediction for GeneMark_model.77956_t
Valid prediction for GeneMark_model.77923_t
Valid prediction for snap_scaffold_19-snap.450-T1
Valid prediction for GeneMark_model.77960_t
Valid prediction for GlimmerHMM_glimmerT_44721-T1
Valid prediction for GeneMark_model.77897_t
Valid prediction for snap_scaffold_19-snap.451-T1
Valid prediction for GeneMark_model.77949_t
Valid prediction for Augustus_model.g29843.t1
Valid prediction for GeneMark_model.77905_t
Valid prediction for GeneMark_model.77944_t
Valid prediction for GeneMark_model.77903_t
Valid prediction for GeneMark_model.77902_t
Valid prediction for snap_scaffold_19-snap.469-T1
Valid prediction for GeneMark_model.77964_t
Valid prediction for snap_scaffold_19-snap.468-T1
Valid prediction for snap_scaffold_19-snap.441-T1
Valid prediction for snap_scaffold_19-snap.440-T1
Valid prediction for GeneMark_model.77893_t
Valid prediction for snap_scaffold_19-snap.458-T1
Valid prediction for GeneMark_model.77920_t
Valid prediction for GeneMark_model.77929_t
Valid prediction for GlimmerHMM_glimmerT_44719-T1
Valid prediction for Augustus_model.g29844.t1
Valid prediction for GeneMark_model.77898_t
Valid prediction for Augustus_model.g29836.t1
Valid prediction for GeneMark_model.77917_t
Valid prediction for GeneMark_model.77896_t
Valid prediction for GlimmerHMM_glimmerT_44726-T1
Valid prediction for GeneMark_model.77942_t
Valid prediction for snap_scaffold_19-snap.482-T1
Valid prediction for GeneMark_model.77932_t
Valid prediction for snap_scaffold_19-snap.436-T1
Valid prediction for GeneMark_model.77939_t
Couldn't classify 165704, 166288
Sorry, prediction pasa_asmbl_22056.p1 fails validation.
(ATG)	 CG	165704-166288	AG	CCA
Valid prediction for GeneMark_model.77936_t
Valid prediction for Augustus_model.g29834.t1
Valid prediction for GlimmerHMM_glimmerT_44724-T1
Valid prediction for GeneMark_model.77940_t
Valid prediction for Augustus_model.g29853.t1
Couldn't classify 219452, 219487
Couldn't classify 223230, 223348
Sorry, prediction pasa_asmbl_22058.p1 fails validation.
(AAG)	 CC	219452-219487	GT	ATG
(CTG)	 AG	220012-220117	GT	GGG
(ACC)	 AG	220602-220807	GT	GGG
(GAG)	 AG	221273-221334	GT	AGG
(CAC)	 AG	221508-221582	GT	AAG
(ATG)	 AG	221955-222103	GT	AGG
(GTC)	 AG	222336-222450	GT	AAG
(GAA)	 AG	222804-222991	GT	TGG
(CTC)	 AG	223230-223348	CA	ACC
add_exon() Sorry, pasa_asmbl_22058.p1 221955-222103-initial-1 is invalid.
-recovered pasa_asmbl_22058.p1, initial, 221955, 222103
-recovered pasa_asmbl_22058.p1, internal, 220012, 220117
-recovered pasa_asmbl_22058.p1, internal, 220602, 220807
-recovered pasa_asmbl_22058.p1, internal, 221273, 221334
-recovered pasa_asmbl_22058.p1, internal, 221508, 221582
-recovered pasa_asmbl_22058.p1, internal, 221955, 222103
-recovered pasa_asmbl_22058.p1, internal, 222336, 222450
-recovered pasa_asmbl_22058.p1, internal, 222804, 222991
Valid prediction for GeneMark_model.77927_t
Valid prediction for GeneMark_model.77925_t
Valid prediction for snap_scaffold_19-snap.462-T1
Valid prediction for snap_scaffold_19-snap.438-T1
Valid prediction for snap_scaffold_19-snap.443-T1
Valid prediction for GlimmerHMM_glimmerT_44706-T1
Valid prediction for snap_scaffold_19-snap.478-T1
Valid prediction for GlimmerHMM_glimmerT_44715-T1
Valid prediction for GeneMark_model.77922_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_44725-T1
Valid prediction for GeneMark_model.77961_t
Valid prediction for GlimmerHMM_glimmerT_44728-T1
Valid prediction for Augustus_model.g29835.t1
Valid prediction for snap_scaffold_19-snap.449-T1
Valid prediction for CodingQuarry_transcript_25546-T1
Valid prediction for GeneMark_model.77901_t
Valid prediction for snap_scaffold_19-snap.476-T1
Valid prediction for GlimmerHMM_glimmerT_44730-T1
Valid prediction for GlimmerHMM_glimmerT_44707-T1
Valid prediction for GeneMark_model.77933_t
Valid prediction for Augustus_model.g29838.t1
Valid prediction for snap_scaffold_19-snap.488-T1
Valid prediction for GlimmerHMM_glimmerT_44718-T1
Valid prediction for GeneMark_model.77963_t
Valid prediction for GeneMark_model.77954_t
Valid prediction for GeneMark_model.77959_t
Valid prediction for CodingQuarry_transcript_25547-T1
Valid prediction for GeneMark_model.77947_t
Valid prediction for snap_scaffold_19-snap.487-T1
Valid prediction for Augustus_model.g29847.t1
Valid prediction for Augustus_model.g29846.t1
Valid prediction for snap_scaffold_19-snap.456-T1
Valid prediction for GeneMark_model.77926_t
Valid prediction for Augustus_model.g29837.t1
Valid prediction for Augustus_model.g29841.t1
Valid prediction for snap_scaffold_19-snap.485-T1
Valid prediction for snap_scaffold_19-snap.483-T1
Valid prediction for GeneMark_model.77938_t
Valid prediction for GeneMark_model.77924_t
Valid prediction for snap_scaffold_19-snap.442-T1
Valid prediction for GlimmerHMM_glimmerT_44720-T1
Valid prediction for snap_scaffold_19-snap.491-T1
Valid prediction for GeneMark_model.77941_t
Valid prediction for snap_scaffold_19-snap.489-T1
Valid prediction for GeneMark_model.77946_t
Valid prediction for GeneMark_model.77928_t
Valid prediction for Augustus_model.g29839.t1
Valid prediction for GeneMark_model.77935_t
Valid prediction for GlimmerHMM_glimmerT_44705-T1
Valid prediction for snap_scaffold_19-snap.457-T1
Valid prediction for snap_scaffold_19-snap.437-T1
Valid prediction for GeneMark_model.77911_t
Valid prediction for snap_scaffold_19-snap.453-T1
Valid prediction for pasa_asmbl_21257.p2
Valid prediction for snap_scaffold_19-snap.447-T1
Couldn't classify 88156, 88307
Sorry, prediction pasa_asmbl_21254.p1 fails validation.
(CTT)	 AT	88156-88307	GT	TGG
(GAG)	 AG	88721-88836	GT	AGG
(TTT)	 AG	90772-90852	GT	GGG
(GAG)	 AG	91337-91417	GT	TCG
(ACA)	 AG	91663-91865	GT	AGG
(GCT)	 AG	94014-94088	AT	GAA
-recovered pasa_asmbl_21254.p1, terminal, 94014, 94088
-recovered pasa_asmbl_21254.p1, internal, 88721, 88836
-recovered pasa_asmbl_21254.p1, internal, 90772, 90852
-recovered pasa_asmbl_21254.p1, internal, 91337, 91417
-recovered pasa_asmbl_21254.p1, internal, 91663, 91865
Valid prediction for snap_scaffold_19-snap.464-T1
Valid prediction for GeneMark_model.77913_t
Valid prediction for snap_scaffold_19-snap.481-T1
Valid prediction for GlimmerHMM_glimmerT_44713-T1
Valid prediction for snap_scaffold_19-snap.475-T1
Valid prediction for GeneMark_model.77945_t
Valid prediction for HiQ_model.g29851.t1
Valid prediction for GeneMark_model.77965_t
Valid prediction for GlimmerHMM_glimmerT_44714-T1
Valid prediction for GeneMark_model.77930_t
Valid prediction for GeneMark_model.77921_t
Valid prediction for snap_scaffold_19-snap.444-T1
Valid prediction for snap_scaffold_19-snap.466-T1
Valid prediction for snap_scaffold_19-snap.486-T1
Valid prediction for GlimmerHMM_glimmerT_44711-T1
Valid prediction for snap_scaffold_19-snap.470-T1
Valid prediction for GeneMark_model.77892_t
Valid prediction for GeneMark_model.77909_t
Valid prediction for GeneMark_model.77899_t
Valid prediction for GlimmerHMM_glimmerT_44723-T1
Valid prediction for GeneMark_model.77952_t
Valid prediction for GlimmerHMM_glimmerT_44717-T1
Valid prediction for Augustus_model.g29850.t1
Valid prediction for GlimmerHMM_glimmerT_44729-T1
Valid prediction for GeneMark_model.77957_t
Valid prediction for GeneMark_model.77919_t
Valid prediction for Augustus_model.g29849.t1
Valid prediction for snap_scaffold_19-snap.452-T1
Valid prediction for GeneMark_model.77955_t
Valid prediction for GeneMark_model.77906_t
Valid prediction for GlimmerHMM_glimmerT_44722-T1
Valid prediction for snap_scaffold_19-snap.439-T1
Valid prediction for GeneMark_model.77908_t
Valid prediction for GeneMark_model.77895_t
Valid prediction for GeneMark_model.77904_t
Valid prediction for GlimmerHMM_glimmerT_44709-T1
Valid prediction for GeneMark_model.77915_t
Valid prediction for snap_scaffold_19-snap.471-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for snap_scaffold_19-snap.477-T1
Valid prediction for GeneMark_model.77918_t
Valid prediction for GlimmerHMM_glimmerT_44710-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 167052, rend_intergenic: 167049  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10142, rend_intergenic: 7028  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24641, rend_intergenic: 16270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35143, rend_intergenic: 25757  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53123, rend_intergenic: 45390  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54973, rend_intergenic: 53623  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68605, rend_intergenic: 65602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80373, rend_intergenic: 74044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85805, rend_intergenic: 80513  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92592, rend_intergenic: 87142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96142, rend_intergenic: 92879  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116355, rend_intergenic: 111026  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153235, rend_intergenic: 141557  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155663, rend_intergenic: 153431  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165976, rend_intergenic: 157129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178452, rend_intergenic: 166030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 185079, rend_intergenic: 179730  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 226410, rend_intergenic: 201710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233841, rend_intergenic: 228405  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 234433
-exon list size: 970


building trellis

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52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 49 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 167052, rend_intergenic: 167049  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10142, rend_intergenic: 7028  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24641, rend_intergenic: 16270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35143, rend_intergenic: 25757  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53123, rend_intergenic: 45390  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54973, rend_intergenic: 53623  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68605, rend_intergenic: 65602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80373, rend_intergenic: 74044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85805, rend_intergenic: 80513  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92592, rend_intergenic: 87142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96142, rend_intergenic: 92879  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116355, rend_intergenic: 111026  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153235, rend_intergenic: 141557  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155663, rend_intergenic: 153431  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165976, rend_intergenic: 157129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178452, rend_intergenic: 166030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 185079, rend_intergenic: 179730  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 226410, rend_intergenic: 201710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233841, rend_intergenic: 228405  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 21 predictions persist after filtering for low support