-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_19/scaffold_19_12793106-12990214

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_46204-T1
Valid prediction for pasa_asmbl_22637.p1
Valid prediction for pasa_asmbl_22631.p1
Valid prediction for GeneMark_model.80427_t
Valid prediction for Augustus_model.g30842.t1
Valid prediction for GlimmerHMM_glimmerT_46207-T1
Valid prediction for GlimmerHMM_glimmerT_46210-T1
Valid prediction for GeneMark_model.80440_t
Valid prediction for GlimmerHMM_glimmerT_46222-T1
Valid prediction for GeneMark_model.80461_t
Valid prediction for snap_scaffold_19-snap.2541-T1
Couldn't classify 168244, 168420
Sorry, prediction CodingQuarry_transcript_25818-T1 fails validation.
(ATG)	 AC	166643-166658	GT	AGG
(TGT)	 AG	167005-167149	GT	CGG
(GCC)	 AG	167423-167568	GT	AGG
(CAG)	 CC	168244-168420	GT	TGG
(ACC)	 AG	168537-168652	GT	ATG
(ACC)	 AG	168944-169104	GT	ATG
(TTG)	 AG	169321-169447	GT	AGG
(ACT)	 AG	169631-169708	GT	AGG
(GTG)	 AG	169829-169905	GT	AGG
(TAA)	 AG	170004-170061	GT	TGG
(TTC)	 AG	170355-170465	GT	TGG
(GCT)	 AG	170661-170729	CC	AAC
-recovered CodingQuarry_transcript_25818-T1, initial, 166643, 166658
-recovered CodingQuarry_transcript_25818-T1, terminal, 170661, 170729
-recovered CodingQuarry_transcript_25818-T1, internal, 167005, 167149
-recovered CodingQuarry_transcript_25818-T1, internal, 167423, 167568
-recovered CodingQuarry_transcript_25818-T1, internal, 168537, 168652
-recovered CodingQuarry_transcript_25818-T1, internal, 168944, 169104
-recovered CodingQuarry_transcript_25818-T1, internal, 169321, 169447
-recovered CodingQuarry_transcript_25818-T1, internal, 169631, 169708
-recovered CodingQuarry_transcript_25818-T1, internal, 169829, 169905
-recovered CodingQuarry_transcript_25818-T1, internal, 170004, 170061
-recovered CodingQuarry_transcript_25818-T1, internal, 170355, 170465
Valid prediction for GlimmerHMM_glimmerT_46193-T1
Valid prediction for GeneMark_model.80475_t
Valid prediction for snap_scaffold_19-snap.2543-T1
Valid prediction for GlimmerHMM_glimmerT_46214-T1
Valid prediction for snap_scaffold_19-snap.2511-T1
Valid prediction for CodingQuarry_transcript_25816-T1
Valid prediction for CodingQuarry_transcript_25815-T1
Valid prediction for Augustus_model.g30836.t1
Valid prediction for CodingQuarry_transcript_25827-T1
Valid prediction for Augustus_model.g30835.t1
Valid prediction for snap_scaffold_19-snap.2509-T1
Valid prediction for snap_scaffold_19-snap.2521-T1
Valid prediction for snap_scaffold_19-snap.2516-T1
Valid prediction for GeneMark_model.80453_t
Valid prediction for GeneMark_model.80432_t
Valid prediction for GeneMark_model.80468_t
Valid prediction for pasa_asmbl_22633.p1
Valid prediction for GeneMark_model.80444_t
Valid prediction for snap_scaffold_19-snap.2524-T1
Valid prediction for GeneMark_model.80429_t
Valid prediction for snap_scaffold_19-snap.2528-T1
Valid prediction for HiQ_model.g30841.t1
Valid prediction for GeneMark_model.80449_t
Valid prediction for GeneMark_model.80435_t
Valid prediction for snap_scaffold_19-snap.2518-T1
Valid prediction for GeneMark_model.80457_t
Valid prediction for GlimmerHMM_glimmerT_46223-T1
Valid prediction for GlimmerHMM_glimmerT_46220-T1
Valid prediction for GeneMark_model.80446_t
Couldn't classify 34122, 34252
Couldn't classify 34473, 34583
Sorry, prediction CodingQuarry_transcript_25813-T1 fails validation.
(ATG)	 AC	32176-32187	GT	AGG
(GAC)	 AG	32510-32631	GT	AGG
(GAA)	 AG	33066-33162	GT	TGG
(ACA)	 AG	33397-33772	GT	AGG
(TGG)	 AG	34122-34252	GG	CAG
(GAC)	 CG	34473-34583	GT	AGG
(ACA)	 AG	34705-34947	GG	AAG
-recovered CodingQuarry_transcript_25813-T1, initial, 32176, 32187
add_exon() Sorry, CodingQuarry_transcript_25813-T1 33397-33772-terminal-3 is invalid.
-recovered CodingQuarry_transcript_25813-T1, terminal, 33397, 33772
-recovered CodingQuarry_transcript_25813-T1, terminal, 34705, 34947
-recovered CodingQuarry_transcript_25813-T1, internal, 32510, 32631
-recovered CodingQuarry_transcript_25813-T1, internal, 33066, 33162
-recovered CodingQuarry_transcript_25813-T1, internal, 33397, 33772
Valid prediction for GeneMark_model.80442_t
Valid prediction for snap_scaffold_19-snap.2513-T1
Valid prediction for snap_scaffold_19-snap.2547-T1
Valid prediction for HiQ_model.g30847.t1
Valid prediction for snap_scaffold_19-snap.2508-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for HiQ_model.g30833.t1
Valid prediction for GlimmerHMM_glimmerT_46209-T1
Valid prediction for snap_scaffold_19-snap.2530-T1
Valid prediction for CodingQuarry_transcript_25812-T1
Couldn't classify 168244, 168420
Couldn't classify 169631, 169707
Couldn't classify 169825, 169905
Sorry, prediction CodingQuarry_transcript_25819-T1 fails validation.
(ATG)	 AC	166643-166658	GT	AGG
(TGT)	 AG	167005-167149	GT	CGG
(GCC)	 AG	167423-167568	GT	AGG
(CAG)	 CC	168244-168420	GT	TGG
(ACC)	 AG	168537-168652	GT	ATG
(ACC)	 AG	168944-169104	GT	ATG
(TTG)	 AG	169321-169447	GT	AGG
(ACT)	 AG	169631-169707	GG	CAG
(GCA)	 AT	169825-169905	GT	AGG
(TAA)	 AG	170004-170061	GT	TGG
(TTC)	 AG	170355-170465	GT	TGG
(GCT)	 AG	170661-170729	CC	AAC
-recovered CodingQuarry_transcript_25819-T1, initial, 166643, 166658
-recovered CodingQuarry_transcript_25819-T1, terminal, 170661, 170729
-recovered CodingQuarry_transcript_25819-T1, internal, 167005, 167149
-recovered CodingQuarry_transcript_25819-T1, internal, 167423, 167568
-recovered CodingQuarry_transcript_25819-T1, internal, 168537, 168652
-recovered CodingQuarry_transcript_25819-T1, internal, 168944, 169104
-recovered CodingQuarry_transcript_25819-T1, internal, 169321, 169447
-recovered CodingQuarry_transcript_25819-T1, internal, 170004, 170061
-recovered CodingQuarry_transcript_25819-T1, internal, 170355, 170465
Valid prediction for pasa_asmbl_22632.p1
Valid prediction for GlimmerHMM_glimmerT_46216-T1
Valid prediction for GeneMark_model.80431_t
Valid prediction for GeneMark_model.80470_t
Valid prediction for GlimmerHMM_glimmerT_46202-T1
Valid prediction for GeneMark_model.80455_t
Valid prediction for GlimmerHMM_glimmerT_46205-T1
Valid prediction for Augustus_model.g30843.t1
Valid prediction for GlimmerHMM_glimmerT_46195-T1
Valid prediction for GeneMark_model.80437_t
Valid prediction for Augustus_model.g30850.t1
Valid prediction for GeneMark_model.80464_t
Valid prediction for snap_scaffold_19-snap.2539-T1
Valid prediction for GlimmerHMM_glimmerT_46203-T1
Valid prediction for snap_scaffold_19-snap.2535-T1
Valid prediction for snap_scaffold_19-snap.2510-T1
Valid prediction for snap_scaffold_19-snap.2546-T1
Valid prediction for GeneMark_model.80466_t
Valid prediction for snap_scaffold_19-snap.2540-T1
Valid prediction for GeneMark_model.80459_t
Valid prediction for Augustus_model.g30845.t1
Valid prediction for snap_scaffold_19-snap.2536-T1
Valid prediction for snap_scaffold_19-snap.2523-T1
Valid prediction for GlimmerHMM_glimmerT_46212-T1
Valid prediction for HiQ_model.g30851.t1
Valid prediction for GlimmerHMM_glimmerT_46211-T1
Valid prediction for snap_scaffold_19-snap.2548-T1
Valid prediction for GlimmerHMM_glimmerT_46199-T1
Valid prediction for Augustus_model.g30839.t1
Valid prediction for GlimmerHMM_glimmerT_46221-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.80472_t
Valid prediction for snap_scaffold_19-snap.2542-T1
Valid prediction for snap_scaffold_19-snap.2531-T1
Valid prediction for snap_scaffold_19-snap.2533-T1
Valid prediction for Augustus_model.g30832.t1
Valid prediction for GeneMark_model.80456_t
Valid prediction for GlimmerHMM_glimmerT_46219-T1
Valid prediction for GeneMark_model.80426_t
Couldn't classify 34598, 35302
Sorry, prediction pasa_asmbl_21774.p1 fails validation.
(CAG)	 GG	34598-35302	TC	AAT
Valid prediction for GeneMark_model.80448_t
Valid prediction for HiQ_model.g30848.t1
Couldn't classify 111460, 111595
Sorry, prediction pasa_asmbl_21768.p1 fails validation.
(CTG)	 AG	111460-111595	GT	AGG
(AAC)	 AG	113299-113433	GT	GGG
(CTC)	 AG	113651-113805	GT	ACG
(GAG)	 AG	113946-114071	AG	AGA
-recovered pasa_asmbl_21768.p1, terminal, 111460, 111595
-recovered pasa_asmbl_21768.p1, terminal, 113946, 114071
-recovered pasa_asmbl_21768.p1, internal, 111460, 111595
-recovered pasa_asmbl_21768.p1, internal, 113299, 113433
-recovered pasa_asmbl_21768.p1, internal, 113651, 113805
Valid prediction for GlimmerHMM_glimmerT_46198-T1
Valid prediction for GlimmerHMM_glimmerT_46217-T1
Valid prediction for Augustus_model.g30829.t1
Valid prediction for GeneMark_model.80441_t
Valid prediction for GlimmerHMM_glimmerT_46213-T1
Valid prediction for snap_scaffold_19-snap.2527-T1
Valid prediction for GeneMark_model.80425_t
Valid prediction for GeneMark_model.80460_t
Valid prediction for GlimmerHMM_glimmerT_46197-T1
Valid prediction for GlimmerHMM_glimmerT_46218-T1
Valid prediction for CodingQuarry_transcript_25821-T1
Couldn't classify 22772, 22870
Sorry, prediction pasa_asmbl_21783.p1 fails validation.
(ATG)	 TC	18736-18783	GT	AGG
(TCT)	 AG	19740-19850	GT	AGG
(GAG)	 AG	19972-20119	GT	CGG
(GTA)	 AG	20282-20373	GT	TGG
(CTG)	 AG	20636-20806	GT	AGG
(GAG)	 AG	21129-21323	GT	AGG
(CAC)	 AG	21525-21644	GT	TTG
(CTT)	 AG	21925-21999	GT	AGG
(TTG)	 AG	22355-22447	GT	AGG
(ATG)	 AG	22568-22663	GT	AGG
(AGG)	 AG	22772-22870	AA	ACA
-recovered pasa_asmbl_21783.p1, initial, 18736, 18783
-recovered pasa_asmbl_21783.p1, initial, 22568, 22663
-recovered pasa_asmbl_21783.p1, internal, 19740, 19850
-recovered pasa_asmbl_21783.p1, internal, 19972, 20119
-recovered pasa_asmbl_21783.p1, internal, 20282, 20373
-recovered pasa_asmbl_21783.p1, internal, 20636, 20806
-recovered pasa_asmbl_21783.p1, internal, 21129, 21323
-recovered pasa_asmbl_21783.p1, internal, 21525, 21644
-recovered pasa_asmbl_21783.p1, internal, 21925, 21999
-recovered pasa_asmbl_21783.p1, internal, 22355, 22447
-recovered pasa_asmbl_21783.p1, internal, 22568, 22663
Valid prediction for pasa_asmbl_21764.p3
Valid prediction for GeneMark_model.80451_t
Couldn't classify 49068, 49163
Couldn't classify 51484, 51603
Sorry, prediction pasa_asmbl_21771.p1 fails validation.
(ACA)	 CC	49068-49163	GT	AGG
(ATA)	 AG	49923-49976	GT	CGG
(CGG)	 AG	50343-50576	GT	AGG
(ATG)	 AG	51087-51287	GT	AGG
(AGG)	 AG	51484-51603	GT	CAG
-recovered pasa_asmbl_21771.p1, initial, 51087, 51287
-recovered pasa_asmbl_21771.p1, internal, 49923, 49976
-recovered pasa_asmbl_21771.p1, internal, 50343, 50576
-recovered pasa_asmbl_21771.p1, internal, 51087, 51287
-recovered pasa_asmbl_21771.p1, internal, 51484, 51603
Valid prediction for Augustus_model.g30830.t1
Valid prediction for GeneMark_model.80447_t
Valid prediction for snap_scaffold_19-snap.2532-T1
Valid prediction for CodingQuarry_transcript_25810-T1
Valid prediction for snap_scaffold_19-snap.2514-T1
Valid prediction for GeneMark_model.80430_t
Valid prediction for snap_scaffold_19-snap.2525-T1
Valid prediction for GlimmerHMM_glimmerT_46208-T1
Valid prediction for CodingQuarry_transcript_25811-T1
Valid prediction for GlimmerHMM_glimmerT_46196-T1
Valid prediction for Augustus_model.g30846.t1
Valid prediction for pasa_asmbl_21787.p1
Valid prediction for snap_scaffold_19-snap.2512-T1
Valid prediction for Augustus_model.g30844.t1
Valid prediction for GeneMark_model.80428_t
Valid prediction for Augustus_model.g30834.t1
Valid prediction for GeneMark_model.80438_t
Valid prediction for GeneMark_model.80473_t
Valid prediction for snap_scaffold_19-snap.2534-T1
Valid prediction for snap_scaffold_19-snap.2529-T1
Valid prediction for GeneMark_model.80434_t
Valid prediction for CodingQuarry_transcript_25820-T1
Valid prediction for snap_scaffold_19-snap.2517-T1
Valid prediction for GeneMark_model.80471_t
Valid prediction for GlimmerHMM_glimmerT_46200-T1
Valid prediction for GlimmerHMM_glimmerT_46215-T1
Valid prediction for snap_scaffold_19-snap.2526-T1
Valid prediction for GeneMark_model.80465_t
Valid prediction for GlimmerHMM_glimmerT_46201-T1
Valid prediction for Augustus_model.g30837.t1
Couldn't classify 34281, 34522
Sorry, prediction pasa_asmbl_21776.p1 fails validation.
(ATG)	 AG	32508-32531	GT	AGG
(TTG)	 AG	32908-33026	GT	AGG
(ATG)	 AG	33262-33475	GT	AGG
(GTG)	 AG	33948-34003	GT	ACG
(TGA)	 AG	34073-34182	GT	TGG
(GCC)	 AG	34281-34522	GA	GAG
-recovered pasa_asmbl_21776.p1, initial, 32508, 32531
add_exon() Sorry, pasa_asmbl_21776.p1 33262-33475-initial-1 is invalid.
-recovered pasa_asmbl_21776.p1, initial, 33262, 33475
-recovered pasa_asmbl_21776.p1, internal, 32508, 32531
-recovered pasa_asmbl_21776.p1, internal, 32908, 33026
-recovered pasa_asmbl_21776.p1, internal, 33262, 33475
-recovered pasa_asmbl_21776.p1, internal, 33948, 34003
-recovered pasa_asmbl_21776.p1, internal, 34073, 34182
Valid prediction for snap_scaffold_19-snap.2537-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for snap_scaffold_19-snap.2519-T1
Valid prediction for snap_scaffold_19-snap.2545-T1
Valid prediction for Augustus_model.g30831.t1
Valid prediction for GeneMark_model.80467_t
Valid prediction for CodingQuarry_transcript_25814-T1
Valid prediction for Augustus_model.g30838.t1
Valid prediction for GlimmerHMM_glimmerT_46194-T1
Valid prediction for CodingQuarry_transcript_25825-T1
Valid prediction for Augustus_model.g30840.t1
Valid prediction for CodingQuarry_transcript_25822-T1
Valid prediction for GeneMark_model.80445_t
Valid prediction for GeneMark_model.80436_t
Valid prediction for snap_scaffold_19-snap.2544-T1
Valid prediction for HiQ_model.g30849.t1
Couldn't classify 179417, 179515
Couldn't classify 181630, 181884
Sorry, prediction pasa_asmbl_21751.p1 fails validation.
(AAG)	 TG	179417-179515	GT	GAG
(GAC)	 AG	181630-181884	GG	AAG
Valid prediction for CodingQuarry_transcript_25817-T1
Valid prediction for snap_scaffold_19-snap.2522-T1
Valid prediction for GlimmerHMM_glimmerT_46192-T1
Valid prediction for CodingQuarry_transcript_25824-T1
Valid prediction for GeneMark_model.80433_t
Valid prediction for GeneMark_model.80462_t
Valid prediction for GeneMark_model.80454_t
Valid prediction for GeneMark_model.80458_t
Valid prediction for snap_scaffold_19-snap.2520-T1
Valid prediction for GeneMark_model.80439_t
Valid prediction for snap_scaffold_19-snap.2538-T1
Valid prediction for GeneMark_model.80469_t
Valid prediction for snap_scaffold_19-snap.2515-T1
Valid prediction for GeneMark_model.80452_t
Valid prediction for GlimmerHMM_glimmerT_46206-T1
Valid prediction for GeneMark_model.80450_t
Valid prediction for GeneMark_model.80463_t
Couldn't classify 45765, 45852
Couldn't classify 47024, 47110
Sorry, prediction pasa_asmbl_21773.p1 fails validation.
(CTG)	 TG	45765-45852	GT	GGG
(TCG)	 AG	45963-46041	GT	AGG
(GGT)	 AG	46167-46306	GT	AGG
(ACG)	 AG	46518-46688	GT	CAG
(AGT)	 AG	46777-46877	GT	AGG
(CCC)	 AG	47024-47110	CC	GCC
-recovered pasa_asmbl_21773.p1, internal, 45963, 46041
-recovered pasa_asmbl_21773.p1, internal, 46167, 46306
-recovered pasa_asmbl_21773.p1, internal, 46518, 46688
-recovered pasa_asmbl_21773.p1, internal, 46777, 46877
Valid prediction for GeneMark_model.80443_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 18880, rend_intergenic: 15734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21201, rend_intergenic: 19289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43849, rend_intergenic: 40921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44863, rend_intergenic: 43924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53447, rend_intergenic: 47616  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56695, rend_intergenic: 54306  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67194, rend_intergenic: 57191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77188, rend_intergenic: 68386  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95319, rend_intergenic: 85314  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100961, rend_intergenic: 97284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111375, rend_intergenic: 101644  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143982, rend_intergenic: 134452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155785, rend_intergenic: 148029  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182702, rend_intergenic: 179586  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 197109
-exon list size: 824


building trellis

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23.0    
23.1    
23.2    
23.4    
23.5    
23.6    
23.7    
23.8    
24.0    
24.1    
24.2    
24.3    
24.5    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.5    
25.7    
25.8    
25.9    
26.0    
26.2    
26.3    
26.4    
26.5    
26.6    
26.8    
26.9    
27.0    
27.1    
27.2    
27.4    
27.5    
27.6    
27.7    
27.8    
28.0    
28.1    
28.2    
28.3    
28.5    
28.6    
28.7    
28.8    
28.9    
29.1    
29.2    
29.3    
29.4    
29.5    
29.7    
29.8    
29.9    
30.0    
30.1    
30.3    
30.4    
30.5    
30.6    
30.8    
30.9    
31.0    
31.1    
31.2    
31.4    
31.5    
31.6    
31.7    
31.8    
32.0    
32.1    
32.2    
32.3    
32.4    
32.6    
32.7    
32.8    
32.9    
33.1    
33.2    
33.3    
33.4    
33.5    
33.7    
33.8    
33.9    
34.0    
34.1    
34.3    
34.4    
34.5    
34.6    
34.7    
34.9    
35.0    
35.1    
35.2    
35.4    
35.5    
35.6    
35.7    
35.8    
36.0    
36.1    
36.2    
36.3    
36.4    
36.6    
36.7    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.0    
38.1    
38.3    
38.4    
38.5    
38.6    
38.7    
38.9    
39.0    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.3    
40.4    
40.6    
40.7    
40.8    
40.9    
41.0    
41.2    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.7    
42.9    
43.0    
43.1    
43.2    
43.3    
43.5    
43.6    
43.7    
43.8    
43.9    
44.1    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
44.9    
45.0    
45.2    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.2    
46.4    
46.5    
46.6    
46.7    
46.9    
47.0    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.1    
53.3    
53.4    
53.5    
53.6    
53.8    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.8    
55.0    
55.1    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
55.9    
56.1    
56.2    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.8    
59.0    
59.1    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.7    
69.9    
70.0    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.1    
73.2    
73.4    
73.5    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.0    
76.2    
76.3    
76.4    
76.5    
76.6    
76.8    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.0    
80.1    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.2    
85.4    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.1    
88.3    
88.4    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.6    
92.7    
92.9    
93.0    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.7    
96.9    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 18880, rend_intergenic: 15734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21201, rend_intergenic: 19289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43849, rend_intergenic: 40921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44863, rend_intergenic: 43924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53447, rend_intergenic: 47616  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56695, rend_intergenic: 54306  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67194, rend_intergenic: 57191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77188, rend_intergenic: 68386  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95319, rend_intergenic: 85314  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100961, rend_intergenic: 97284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111375, rend_intergenic: 101644  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143982, rend_intergenic: 134452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155785, rend_intergenic: 148029  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182702, rend_intergenic: 179586  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support