-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_19/scaffold_19_12191163-12410435

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_19-snap.2433-T1
Couldn't classify 67892, 69436
Sorry, prediction pasa_asmbl_22581.p1 fails validation.
(GTC)	 CT	67892-69436	GG	AGG
Valid prediction for HiQ_model.g30780.t1
Valid prediction for snap_scaffold_19-snap.2413-T1
Valid prediction for GeneMark_model.80334_t
Valid prediction for GlimmerHMM_glimmerT_46110-T1
Valid prediction for HiQ_model.g30764.t1
Valid prediction for CodingQuarry_transcript_25785-T1
Valid prediction for GeneMark_model.80308_t
Couldn't classify 64354, 64578
Couldn't classify 67015, 67044
Sorry, prediction pasa_asmbl_22579.p1 fails validation.
(TTC)	 GT	64354-64578	GT	AGG
(GAG)	 AG	66620-66889	GT	AGG
(GAC)	 AG	67015-67044	AC	AGA
-recovered pasa_asmbl_22579.p1, internal, 66620, 66889
Valid prediction for CodingQuarry_transcript_25795-T1
Valid prediction for snap_scaffold_19-snap.2436-T1
Valid prediction for Augustus_model.g30781.t1
Valid prediction for GeneMark_model.80313_t
Valid prediction for Augustus_model.g30787.t1
Valid prediction for pasa_asmbl_22576.p1
Valid prediction for GlimmerHMM_glimmerT_46132-T1
Valid prediction for snap_scaffold_19-snap.2425-T1
Valid prediction for Augustus_model.g30771.t1
Valid prediction for snap_scaffold_19-snap.2431-T1
Valid prediction for GeneMark_model.80329_t
Valid prediction for CodingQuarry_transcript_25787-T1
Valid prediction for GlimmerHMM_glimmerT_46117-T1
Valid prediction for GeneMark_model.80311_t
Valid prediction for snap_scaffold_19-snap.2409-T1
Valid prediction for GlimmerHMM_glimmerT_46108-T1
Valid prediction for HiQ_model.g30770.t1
Valid prediction for snap_scaffold_19-snap.2423-T1
Valid prediction for pasa_asmbl_22575.p2
Valid prediction for GlimmerHMM_glimmerT_46126-T1
Valid prediction for GeneMark_model.80305_t
Valid prediction for GlimmerHMM_glimmerT_46119-T1
Valid prediction for snap_scaffold_19-snap.2411-T1
Valid prediction for GeneMark_model.80307_t
Valid prediction for CodingQuarry_transcript_25793-T1
Valid prediction for snap_scaffold_19-snap.2403-T1
Valid prediction for CodingQuarry_transcript_25797-T1
Valid prediction for snap_scaffold_19-snap.2397-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_19-snap.2404-T1
Valid prediction for GeneMark_model.80339_t
Valid prediction for GlimmerHMM_glimmerT_46112-T1
Valid prediction for HiQ_model.g30779.t1
Valid prediction for Augustus_model.g30778.t1
Valid prediction for snap_scaffold_19-snap.2420-T1
Valid prediction for CodingQuarry_transcript_25786-T1
Valid prediction for GlimmerHMM_glimmerT_46128-T1
Valid prediction for HiQ_model.g30767.t1
Valid prediction for GeneMark_model.80303_t
Valid prediction for GlimmerHMM_glimmerT_46130-T1
Valid prediction for GlimmerHMM_glimmerT_46116-T1
Valid prediction for pasa_asmbl_22572.p1
Valid prediction for pasa_asmbl_22583.p1
Valid prediction for GlimmerHMM_glimmerT_46109-T1
Valid prediction for snap_scaffold_19-snap.2432-T1
Couldn't classify 143170, 143448
Couldn't classify 144299, 144349
Sorry, prediction pasa_asmbl_22592.p1 fails validation.
(GGT)	 AA	143170-143448	GT	AGG
(GTA)	 AG	143796-144080	GT	AGG
(CCT)	 AG	144299-144349	CC	GAC
-recovered pasa_asmbl_22592.p1, internal, 143796, 144080
Valid prediction for GeneMark_model.80333_t
Valid prediction for snap_scaffold_19-snap.2400-T1
Valid prediction for HiQ_model.g30785.t1
Valid prediction for pasa_asmbl_22573.p1
Valid prediction for GlimmerHMM_glimmerT_46111-T1
Valid prediction for snap_scaffold_19-snap.2408-T1
Valid prediction for GlimmerHMM_glimmerT_46129-T1
Valid prediction for GeneMark_model.80319_t
Valid prediction for snap_scaffold_19-snap.2406-T1
Valid prediction for pasa_asmbl_22587.p1
Valid prediction for GlimmerHMM_glimmerT_46135-T1
Valid prediction for GlimmerHMM_glimmerT_46113-T1
Valid prediction for GeneMark_model.80323_t
Valid prediction for pasa_asmbl_22602.p1
Valid prediction for GlimmerHMM_glimmerT_46134-T1
Valid prediction for GeneMark_model.80343_t
Valid prediction for CodingQuarry_transcript_25789-T1
Valid prediction for GeneMark_model.80330_t
Valid prediction for pasa_asmbl_22601.p1
Valid prediction for GeneMark_model.80335_t
Valid prediction for GeneMark_model.80317_t
Valid prediction for GeneMark_model.80332_t
Valid prediction for GeneMark_model.80310_t
Valid prediction for snap_scaffold_19-snap.2402-T1
Valid prediction for HiQ_model.g30766.t1
Valid prediction for pasa_asmbl_22569.p1
Valid prediction for GeneMark_model.80315_t
Valid prediction for Augustus_model.g30765.t1
Valid prediction for snap_scaffold_19-snap.2422-T1
Valid prediction for CodingQuarry_transcript_25792-T1
Valid prediction for GeneMark_model.80341_t
Valid prediction for GeneMark_model.80337_t
Valid prediction for GeneMark_model.80342_t
Couldn't classify 145517, 145613
Couldn't classify 148401, 148581
Sorry, prediction pasa_asmbl_22596.p1 fails validation.
(GTG)	 AG	145517-145613	GT	CGG
(ACT)	 AG	145762-145919	GT	AGG
(GAG)	 AG	146086-146149	GT	AGG
(GGT)	 AG	146660-146695	GT	TGG
(GGG)	 AG	146909-146934	GT	ACG
(CTG)	 AG	147017-147124	GT	AGG
(GAG)	 AG	147220-147506	GT	TGG
(GAC)	 AG	147970-148025	GT	AGG
(GAA)	 AG	148121-148310	GT	AGG
(ATC)	 AG	148401-148581	AC	CCA
-recovered pasa_asmbl_22596.p1, internal, 145517, 145613
-recovered pasa_asmbl_22596.p1, internal, 145762, 145919
-recovered pasa_asmbl_22596.p1, internal, 146086, 146149
-recovered pasa_asmbl_22596.p1, internal, 146660, 146695
-recovered pasa_asmbl_22596.p1, internal, 146909, 146934
-recovered pasa_asmbl_22596.p1, internal, 147017, 147124
-recovered pasa_asmbl_22596.p1, internal, 147220, 147506
-recovered pasa_asmbl_22596.p1, internal, 147970, 148025
-recovered pasa_asmbl_22596.p1, internal, 148121, 148310
Valid prediction for GeneMark_model.80321_t
Couldn't classify 135769, 135836
Couldn't classify 142599, 143037
Sorry, prediction pasa_asmbl_22588.p1 fails validation.
(GTG)	 AA	135769-135836	GT	GAG
(TCT)	 AG	136019-136088	GT	TGG
(GAC)	 AG	136226-136332	GT	CGG
(ACG)	 AG	136895-136925	GT	ACG
(GTT)	 AG	137019-137132	GT	AGG
(GCT)	 AG	137376-137547	GT	GGG
(GTT)	 AG	138001-138184	GT	AGG
(GCC)	 AG	141022-141051	GT	TGG
(GAG)	 AG	141794-141911	GT	ATG
(GAT)	 AG	142193-142314	GT	AGG
(GGA)	 AG	142599-143037	TC	AGT
-recovered pasa_asmbl_22588.p1, internal, 136019, 136088
-recovered pasa_asmbl_22588.p1, internal, 136226, 136332
-recovered pasa_asmbl_22588.p1, internal, 136895, 136925
-recovered pasa_asmbl_22588.p1, internal, 137019, 137132
-recovered pasa_asmbl_22588.p1, internal, 137376, 137547
-recovered pasa_asmbl_22588.p1, internal, 138001, 138184
-recovered pasa_asmbl_22588.p1, internal, 141022, 141051
-recovered pasa_asmbl_22588.p1, internal, 141794, 141911
-recovered pasa_asmbl_22588.p1, internal, 142193, 142314
Valid prediction for GeneMark_model.80314_t
Valid prediction for snap_scaffold_19-snap.2399-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_19-snap.2418-T1
Valid prediction for snap_scaffold_19-snap.2410-T1
Valid prediction for GlimmerHMM_glimmerT_46138-T1
Valid prediction for snap_scaffold_19-snap.2414-T1
Valid prediction for GlimmerHMM_glimmerT_46115-T1
Valid prediction for snap_scaffold_19-snap.2428-T1
Valid prediction for snap_scaffold_19-snap.2421-T1
Valid prediction for pasa_asmbl_21687.p1
Valid prediction for Augustus_model.g30768.t1
Valid prediction for GeneMark_model.80306_t
Valid prediction for GeneMark_model.80340_t
Valid prediction for GlimmerHMM_glimmerT_46124-T1
Valid prediction for HiQ_model.g30769.t1
Valid prediction for GeneMark_model.80345_t
Valid prediction for snap_scaffold_19-snap.2419-T1
Valid prediction for GeneMark_model.80331_t
Valid prediction for GeneMark_model.80327_t
Valid prediction for GlimmerHMM_glimmerT_46136-T1
Valid prediction for GeneMark_model.80304_t
Valid prediction for GlimmerHMM_glimmerT_46114-T1
Valid prediction for snap_scaffold_19-snap.2401-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_19-snap.2427-T1
Valid prediction for HiQ_model.g30763.t1
Valid prediction for GeneMark_model.80328_t
Valid prediction for snap_scaffold_19-snap.2430-T1
Valid prediction for GlimmerHMM_glimmerT_46133-T1
Valid prediction for CodingQuarry_transcript_25790-T1
Valid prediction for Augustus_model.g30783.t1
Valid prediction for Augustus_model.g30782.t1
Valid prediction for GlimmerHMM_glimmerT_46107-T1
Valid prediction for GeneMark_model.80325_t
Valid prediction for snap_scaffold_19-snap.2405-T1
Valid prediction for Augustus_model.g30773.t1
Valid prediction for Augustus_model.g30788.t1
Valid prediction for GeneMark_model.80322_t
Valid prediction for GeneMark_model.80344_t
Valid prediction for snap_scaffold_19-snap.2396-T1
Valid prediction for GeneMark_model.80318_t
Valid prediction for GlimmerHMM_glimmerT_46123-T1
Valid prediction for snap_scaffold_19-snap.2429-T1
Valid prediction for snap_scaffold_19-snap.2416-T1
Valid prediction for snap_scaffold_19-snap.2412-T1
Couldn't classify 212132, 212227
Sorry, prediction pasa_asmbl_21676.p1 fails validation.
(GGT)	 GT	212132-212227	GT	AGG
(GCT)	 AG	212407-212513	GT	AAG
(ACA)	 AG	212619-212751	GT	AGG
(AAC)	 AG	212862-212943	GT	AGG
(TGG)	 AG	213042-213100	GT	AGG
(GCC)	 AG	213280-213425	GT	TGG
(CTT)	 AG	213746-213878	GT	AGG
(CGG)	 AG	214227-214346	GT	AGG
(CTG)	 AG	214571-214710	GT	AAG
(TCT)	 AG	214972-215103	GT	AAG
(GTC)	 AG	215354-215572	GT	TGG
(GTA)	 AG	215702-215832	GT	TGG
(AGA)	 AG	215947-216044	GT	AGG
(AAA)	 AG	216120-216213	GT	CTG
(CTG)	 AG	216672-216754	GT	ACG
(GTG)	 AG	216860-216940	GT	AGG
(GTG)	 AG	217043-217136	GT	TGG
(AGA)	 AG	217218-217334	GT	AGG
(GCC)	 AG	217458-217567	GT	CTG
(CTG)	 AG	217661-217750	GT	TGG
(ATC)	 AG	217867-217983	AC	AGA
-recovered pasa_asmbl_21676.p1, terminal, 217867, 217983
-recovered pasa_asmbl_21676.p1, internal, 212407, 212513
-recovered pasa_asmbl_21676.p1, internal, 212619, 212751
-recovered pasa_asmbl_21676.p1, internal, 212862, 212943
-recovered pasa_asmbl_21676.p1, internal, 213042, 213100
-recovered pasa_asmbl_21676.p1, internal, 213280, 213425
-recovered pasa_asmbl_21676.p1, internal, 213746, 213878
-recovered pasa_asmbl_21676.p1, internal, 214227, 214346
-recovered pasa_asmbl_21676.p1, internal, 214571, 214710
-recovered pasa_asmbl_21676.p1, internal, 214972, 215103
-recovered pasa_asmbl_21676.p1, internal, 215354, 215572
-recovered pasa_asmbl_21676.p1, internal, 215702, 215832
-recovered pasa_asmbl_21676.p1, internal, 215947, 216044
-recovered pasa_asmbl_21676.p1, internal, 216120, 216213
-recovered pasa_asmbl_21676.p1, internal, 216672, 216754
-recovered pasa_asmbl_21676.p1, internal, 216860, 216940
-recovered pasa_asmbl_21676.p1, internal, 217043, 217136
-recovered pasa_asmbl_21676.p1, internal, 217218, 217334
-recovered pasa_asmbl_21676.p1, internal, 217458, 217567
-recovered pasa_asmbl_21676.p1, internal, 217661, 217750
Valid prediction for snap_scaffold_19-snap.2415-T1
Valid prediction for GeneMark_model.80336_t
Valid prediction for snap_scaffold_19-snap.2424-T1
Couldn't classify 59258, 60136
Sorry, prediction pasa_asmbl_21689.p1 fails validation.
(GCG)	 CG	59258-60136	CC	AAC
Valid prediction for snap_scaffold_19-snap.2426-T1
Valid prediction for GeneMark_model.80312_t
Valid prediction for Augustus_model.g30784.t1
Valid prediction for GlimmerHMM_glimmerT_46118-T1
Valid prediction for GlimmerHMM_glimmerT_46137-T1
Valid prediction for pasa_asmbl_21685.p1
Valid prediction for Augustus_model.g30775.t1
Valid prediction for GlimmerHMM_glimmerT_46122-T1
Valid prediction for Augustus_model.g30772.t1
Valid prediction for snap_scaffold_19-snap.2435-T1
Valid prediction for GlimmerHMM_glimmerT_46125-T1
Couldn't classify 211970, 211997
Sorry, prediction pasa_asmbl_21678.p1 fails validation.
(ATG)	 CC	203327-203434	GT	AGG
(CAA)	 AG	206384-206401	GT	AGG
(GCA)	 AG	208402-208512	GT	ACG
(CTC)	 AG	210300-210386	GT	AGG
(GAT)	 AG	210604-210660	GT	TTG
(ACG)	 AG	210755-210897	GT	AGG
(TGA)	 AG	211050-211140	GT	AGG
(TCT)	 AG	211242-211379	GT	CGG
(ATG)	 AG	211483-211531	GT	GTG
(TTG)	 AG	211694-211850	GT	GGG
(CTA)	 AG	211970-211997	GA	GAG
-recovered pasa_asmbl_21678.p1, initial, 203327, 203434
-recovered pasa_asmbl_21678.p1, initial, 211483, 211531
add_exon() Sorry, pasa_asmbl_21678.p1 210755-210897-terminal-2 is invalid.
-recovered pasa_asmbl_21678.p1, terminal, 210755, 210897
-recovered pasa_asmbl_21678.p1, internal, 206384, 206401
-recovered pasa_asmbl_21678.p1, internal, 208402, 208512
-recovered pasa_asmbl_21678.p1, internal, 210300, 210386
-recovered pasa_asmbl_21678.p1, internal, 210604, 210660
-recovered pasa_asmbl_21678.p1, internal, 210755, 210897
-recovered pasa_asmbl_21678.p1, internal, 211050, 211140
-recovered pasa_asmbl_21678.p1, internal, 211242, 211379
-recovered pasa_asmbl_21678.p1, internal, 211483, 211531
-recovered pasa_asmbl_21678.p1, internal, 211694, 211850
Valid prediction for GlimmerHMM_glimmerT_46120-T1
Valid prediction for GeneMark_model.80326_t
Valid prediction for Augustus_model.g30776.t1
Valid prediction for GlimmerHMM_glimmerT_46127-T1
Valid prediction for snap_scaffold_19-snap.2437-T1
Valid prediction for HiQ_model.g30786.t1
Valid prediction for Augustus_model.g30774.t1
Valid prediction for CodingQuarry_transcript_25788-T1
Valid prediction for GlimmerHMM_glimmerT_46121-T1
Valid prediction for GeneMark_model.80309_t
Couldn't classify 9641, 10030
Sorry, prediction pasa_asmbl_21692.p1 fails validation.
(CTG)	 CG	9641-10030	GT	AAG
(GTG)	 AG	10286-10420	GT	AGG
(GGA)	 AG	11192-11272	GT	CTG
(GCC)	 AG	11401-11457	GT	AGG
(AGC)	 AG	11647-11722	GT	AGG
(GCC)	 AG	12736-12878	GT	AGG
(GGA)	 AG	13007-13024	GT	AGG
(GGA)	 AG	13331-13537	GT	CAG
(GGT)	 AG	13707-13733	GT	CAG
(GGC)	 AG	13903-13965	GT	AGG
(GGA)	 AG	14236-14319	GT	CTG
(ACA)	 AG	14503-14553	GT	GGG
(GGT)	 AG	14645-14779	GT	CAG
(GGT)	 AG	15297-15350	GT	AGG
(GGC)	 AG	15463-15507	GT	AGG
(CAA)	 AG	16178-16261	GT	AGG
(GGT)	 AG	17348-17479	GT	GTG
(CAC)	 AG	17617-17682	GT	AGG
(GGT)	 AG	17766-17792	GT	CGG
(GGC)	 AG	17886-17984	GT	GGG
(GGC)	 AG	18111-18146	GT	TGG
(GGT)	 AG	18369-18455	GT	ATG
(CAC)	 AG	18530-18562	GT	AGG
(GCT)	 AG	18669-18704	GT	CAG
(GGG)	 AG	18958-19017	GT	AGG
(GGC)	 AG	19251-19328	GT	GGG
(GGA)	 AG	19435-19470	GT	CTG
(GGT)	 AG	19681-19734	GT	CAG
(GGT)	 AG	20035-20106	GT	CAG
(GGT)	 AG	20269-20328	GT	GGG
(AGG)	 AG	20693-20723	GT	AGG
(CCT)	 AG	20920-20973	GT	AGG
(GAC)	 AG	21093-21127	GT	AGG
(AAC)	 AG	21484-21600	GT	CGG
(GGC)	 AG	21702-21858	GT	GAG
(CCA)	 AG	22029-22093	GT	GGG
(GTG)	 AG	22167-22295	GT	AGG
(CTT)	 AG	22513-22545	GT	AGG
(GGT)	 AG	22777-23247	GT	CAG
(CTT)	 AG	23361-23558	GT	AGG
(GAC)	 AG	23722-23831	GT	TGG
(GCC)	 AG	24578-24794	GC	AGG
-recovered pasa_asmbl_21692.p1, terminal, 24578, 24794
-recovered pasa_asmbl_21692.p1, internal, 10286, 10420
-recovered pasa_asmbl_21692.p1, internal, 11192, 11272
-recovered pasa_asmbl_21692.p1, internal, 11401, 11457
-recovered pasa_asmbl_21692.p1, internal, 11647, 11722
-recovered pasa_asmbl_21692.p1, internal, 12736, 12878
-recovered pasa_asmbl_21692.p1, internal, 13007, 13024
-recovered pasa_asmbl_21692.p1, internal, 13331, 13537
-recovered pasa_asmbl_21692.p1, internal, 13707, 13733
-recovered pasa_asmbl_21692.p1, internal, 13903, 13965
-recovered pasa_asmbl_21692.p1, internal, 14236, 14319
-recovered pasa_asmbl_21692.p1, internal, 14503, 14553
-recovered pasa_asmbl_21692.p1, internal, 14645, 14779
-recovered pasa_asmbl_21692.p1, internal, 15297, 15350
-recovered pasa_asmbl_21692.p1, internal, 15463, 15507
-recovered pasa_asmbl_21692.p1, internal, 16178, 16261
-recovered pasa_asmbl_21692.p1, internal, 17348, 17479
-recovered pasa_asmbl_21692.p1, internal, 17617, 17682
-recovered pasa_asmbl_21692.p1, internal, 17766, 17792
-recovered pasa_asmbl_21692.p1, internal, 17886, 17984
-recovered pasa_asmbl_21692.p1, internal, 18111, 18146
-recovered pasa_asmbl_21692.p1, internal, 18369, 18455
-recovered pasa_asmbl_21692.p1, internal, 18530, 18562
-recovered pasa_asmbl_21692.p1, internal, 18669, 18704
-recovered pasa_asmbl_21692.p1, internal, 18958, 19017
-recovered pasa_asmbl_21692.p1, internal, 19251, 19328
-recovered pasa_asmbl_21692.p1, internal, 19435, 19470
-recovered pasa_asmbl_21692.p1, internal, 19681, 19734
-recovered pasa_asmbl_21692.p1, internal, 20035, 20106
-recovered pasa_asmbl_21692.p1, internal, 20269, 20328
-recovered pasa_asmbl_21692.p1, internal, 20693, 20723
-recovered pasa_asmbl_21692.p1, internal, 20920, 20973
-recovered pasa_asmbl_21692.p1, internal, 21093, 21127
-recovered pasa_asmbl_21692.p1, internal, 21484, 21600
-recovered pasa_asmbl_21692.p1, internal, 21702, 21858
-recovered pasa_asmbl_21692.p1, internal, 22029, 22093
-recovered pasa_asmbl_21692.p1, internal, 22167, 22295
-recovered pasa_asmbl_21692.p1, internal, 22513, 22545
-recovered pasa_asmbl_21692.p1, internal, 22777, 23247
-recovered pasa_asmbl_21692.p1, internal, 23361, 23558
-recovered pasa_asmbl_21692.p1, internal, 23722, 23831
-recovered pasa_asmbl_21692.p1, internal, 24578, 24794
Valid prediction for Augustus_model.g30777.t1
Valid prediction for GeneMark_model.80316_t
Valid prediction for GlimmerHMM_glimmerT_46131-T1
Valid prediction for snap_scaffold_19-snap.2417-T1
Valid prediction for GeneMark_model.80338_t
Valid prediction for GeneMark_model.80320_t
Valid prediction for snap_scaffold_19-snap.2407-T1
Valid prediction for snap_scaffold_19-snap.2434-T1
Valid prediction for GeneMark_model.80324_t
Valid prediction for snap_scaffold_19-snap.2398-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 13290, rend_intergenic: 1966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24280, rend_intergenic: 18407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26569, rend_intergenic: 24397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31445, rend_intergenic: 26613  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52983, rend_intergenic: 47731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53888, rend_intergenic: 53048  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56998, rend_intergenic: 55027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69436, rend_intergenic: 65545  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74640, rend_intergenic: 70969  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75617, rend_intergenic: 75133  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76801, rend_intergenic: 76067  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128927, rend_intergenic: 124271  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132739, rend_intergenic: 131309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 219273
-exon list size: 794


building trellis

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99.7    
99.9    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 13290, rend_intergenic: 1966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24280, rend_intergenic: 18407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26569, rend_intergenic: 24397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31445, rend_intergenic: 26613  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52983, rend_intergenic: 47731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53888, rend_intergenic: 53048  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56998, rend_intergenic: 55027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69436, rend_intergenic: 65545  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74640, rend_intergenic: 70969  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75617, rend_intergenic: 75133  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76801, rend_intergenic: 76067  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128927, rend_intergenic: 124271  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132739, rend_intergenic: 131309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support