-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1899

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 953, 982
Sorry, prediction GeneMark_model.109845_t fails validation.
(GAA)	 AG	953-982	GT	CAG
(GGA)	 AG	1014-1049	GT	AGG
(GGA)	 AG	1072-1089	GT	GAG
(GGA)	 AG	1149-1220	GT	AGG
(GGA)	 AG	1241-1283	TA	GAT
-recovered GeneMark_model.109845_t, terminal, 1241, 1283
-recovered GeneMark_model.109845_t, internal, 953, 982
-recovered GeneMark_model.109845_t, internal, 1014, 1049
-recovered GeneMark_model.109845_t, internal, 1072, 1089
-recovered GeneMark_model.109845_t, internal, 1149, 1220

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1795
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support