-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1848

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1848-snap.1-T1
Couldn't classify 924, 1075
Sorry, prediction GeneMark_model.109792_t fails validation.
(CCG)	 AG	924-1075	GT	AGG
-recovered GeneMark_model.109792_t, internal, 924, 1075
Valid prediction for GlimmerHMM_glimmerT_62861-T1
Couldn't classify 924, 1075
Sorry, prediction Augustus_model.g41849.t1 fails validation.
(ATG)	 AT	32-100	GT	AAG
(CCG)	 AG	924-1075	GT	AGG
-recovered Augustus_model.g41849.t1, initial, 32, 100
-recovered Augustus_model.g41849.t1, internal, 924, 1075

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1870
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support