-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1847

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 712, 780
Couldn't classify 1424, 1438
Sorry, prediction GeneMark_model.109791_t fails validation.
(AGA)	 AG	712-780	GT	GTG
(AGA)	 AG	853-873	GT	GAG
(AGG)	 AG	899-1030	GT	AGG
(GGA)	 AG	1054-1140	GT	AGG
(GAA)	 AG	1161-1289	GT	AAG
(AGT)	 AG	1424-1438	GT	AGG
-recovered GeneMark_model.109791_t, internal, 712, 780
-recovered GeneMark_model.109791_t, internal, 853, 873
-recovered GeneMark_model.109791_t, internal, 899, 1030
-recovered GeneMark_model.109791_t, internal, 1054, 1140
-recovered GeneMark_model.109791_t, internal, 1161, 1289
-recovered GeneMark_model.109791_t, internal, 1424, 1438

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1872
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support