-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1846

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 33, 101
Sorry, prediction GeneMark_model.109790_t fails validation.
(AGA)	 AG	33-101	GT	AGG
(AGA)	 AG	1284-1343	GT	AAG
(AGG)	 AG	1377-1428	CT	GAC
-recovered GeneMark_model.109790_t, terminal, 33, 101
-recovered GeneMark_model.109790_t, terminal, 1377, 1428
-recovered GeneMark_model.109790_t, internal, 33, 101
-recovered GeneMark_model.109790_t, internal, 1284, 1343

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1874
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support