-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1804

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1574, 1606
Sorry, prediction GeneMark_model.109749_t fails validation.
(ATG)	 TG	575-588	GT	ACG
(ATC)	 AG	639-662	GT	ACG
(AGG)	 AG	969-1092	GT	AAG
(AGT)	 AG	1336-1355	GT	GAG
(GGG)	 AG	1574-1606	GT	CTG
-recovered GeneMark_model.109749_t, initial, 575, 588
-recovered GeneMark_model.109749_t, internal, 639, 662
-recovered GeneMark_model.109749_t, internal, 969, 1092
-recovered GeneMark_model.109749_t, internal, 1336, 1355
-recovered GeneMark_model.109749_t, internal, 1574, 1606

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1919
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support