-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_18/scaffold_18_9880560-10244941 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_18-snap.2141-T1 Valid prediction for GeneMark_model.76096_t Valid prediction for snap_scaffold_18-snap.2122-T1 Valid prediction for Augustus_model.g29483.t1 Valid prediction for GlimmerHMM_glimmerT_43992-T1 Valid prediction for snap_scaffold_18-snap.2131-T1 Valid prediction for GeneMark_model.76090_t Valid prediction for GlimmerHMM_glimmerT_44029-T1 Valid prediction for snap_scaffold_18-snap.2130-T1 Couldn't classify 288298, 288439 Sorry, prediction pasa_asmbl_20935.p1 fails validation. (CAG) CG 288298-288439 GT GGG (AGA) AG 288781-289361 GG GAG -recovered pasa_asmbl_20935.p1, terminal, 288781, 289361 Valid prediction for snap_scaffold_18-snap.2136-T1 Valid prediction for GlimmerHMM_glimmerT_44009-T1 Valid prediction for GeneMark_model.76108_t Valid prediction for snap_scaffold_18-snap.2149-T1 Valid prediction for GeneMark_model.76233_t Valid prediction for GeneMark_model.76229_t Valid prediction for GeneMark_model.76189_t Valid prediction for GeneMark_model.76140_t Valid prediction for snap_scaffold_18-snap.2165-T1 Valid prediction for pasa_asmbl_20921.p1 Valid prediction for snap_scaffold_18-snap.2171-T1 Valid prediction for GeneMark_model.76200_t Valid prediction for GeneMark_model.76180_t Valid prediction for snap_scaffold_18-snap.2143-T1 Valid prediction for GeneMark_model.76148_t Valid prediction for Augustus_model.g29472.t1 Valid prediction for snap_scaffold_18-snap.2128-T1 Valid prediction for GeneMark_model.76154_t Valid prediction for snap_scaffold_18-snap.2129-T1 Valid prediction for snap_scaffold_18-snap.2127-T1 Valid prediction for GeneMark_model.76211_t Valid prediction for GeneMark_model.76156_t Valid prediction for GeneMark_model.76119_t Valid prediction for GeneMark_model.76130_t Valid prediction for Augustus_model.g29481.t1 Valid prediction for GeneMark_model.76083_t Valid prediction for snap_scaffold_18-snap.2125-T1 Valid prediction for GeneMark_model.76139_t Valid prediction for GeneMark_model.76126_t Valid prediction for GeneMark_model.76117_t Valid prediction for GeneMark_model.76231_t Valid prediction for GeneMark_model.76152_t Valid prediction for snap_scaffold_18-snap.2121-T1 Valid prediction for snap_scaffold_18-snap.2156-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GeneMark_model.76184_t Valid prediction for GeneMark_model.76085_t Couldn't classify 262099, 262365 Sorry, prediction pasa_asmbl_21135.p1 fails validation. (GGG) CA 262099-262365 GT AGG (GTG) AG 262897-263256 GA AGG -recovered pasa_asmbl_21135.p1, terminal, 262897, 263256 Valid prediction for GeneMark_model.76208_t Valid prediction for GeneMark_model.76143_t Valid prediction for Augustus_model.g29466.t1 Valid prediction for GeneMark_model.76093_t Valid prediction for GlimmerHMM_glimmerT_44028-T1 Valid prediction for GeneMark_model.76191_t Valid prediction for GeneMark_model.76105_t Valid prediction for GeneMark_model.76115_t Valid prediction for Augustus_model.g29476.t1 Valid prediction for GlimmerHMM_glimmerT_44036-T1 Valid prediction for GlimmerHMM_glimmerT_44030-T1 Valid prediction for GeneMark_model.76162_t Valid prediction for snap_scaffold_18-snap.2177-T1 Valid prediction for GlimmerHMM_glimmerT_44001-T1 Valid prediction for GeneMark_model.76134_t Valid prediction for GeneMark_model.76099_t Valid prediction for GeneMark_model.76102_t Valid prediction for GeneMark_model.76107_t Valid prediction for GeneMark_model.76128_t Valid prediction for GeneMark_model.76205_t Valid prediction for GlimmerHMM_glimmerT_44020-T1 Valid prediction for GeneMark_model.76159_t Valid prediction for GeneMark_model.76160_t Valid prediction for GeneMark_model.76120_t Valid prediction for snap_scaffold_18-snap.2164-T1 Valid prediction for GeneMark_model.76168_t Valid prediction for snap_scaffold_18-snap.2166-T1 Valid prediction for GlimmerHMM_glimmerT_44034-T1 Valid prediction for GeneMark_model.76182_t Valid prediction for GlimmerHMM_glimmerT_43999-T1 Valid prediction for GeneMark_model.76087_t Valid prediction for snap_scaffold_18-snap.2119-T1 Valid prediction for GlimmerHMM_glimmerT_44025-T1 Valid prediction for GeneMark_model.76172_t Valid prediction for HiQ_model.g29480.t1 Valid prediction for GeneMark_model.76088_t Valid prediction for GeneMark_model.76101_t Valid prediction for GlimmerHMM_glimmerT_44021-T1 Valid prediction for GeneMark_model.76178_t Valid prediction for GeneMark_model.76092_t Couldn't classify 254185, 254274 Couldn't classify 255801, 256005 Sorry, prediction pasa_asmbl_20929.p1 fails validation. (CAG) CA 254185-254274 GT AGG (TCA) AG 254456-254492 GT AGG (TTC) AG 254668-254741 GT AGG (GTC) AG 254995-255482 GT AAG (GCA) AG 255801-256005 GG CAG -recovered pasa_asmbl_20929.p1, internal, 254456, 254492 -recovered pasa_asmbl_20929.p1, internal, 254668, 254741 -recovered pasa_asmbl_20929.p1, internal, 254995, 255482 Valid prediction for GlimmerHMM_glimmerT_44012-T1 Valid prediction for GeneMark_model.76195_t Valid prediction for snap_scaffold_18-snap.2115-T1 Valid prediction for GlimmerHMM_glimmerT_44022-T1 Valid prediction for snap_scaffold_18-snap.2157-T1 Valid prediction for snap_scaffold_18-snap.2133-T1 Valid prediction for GeneMark_model.76221_t Valid prediction for snap_scaffold_18-snap.2147-T1 Valid prediction for GeneMark_model.76145_t Valid prediction for GeneMark_model.76212_t Valid prediction for snap_scaffold_18-snap.2118-T1 Valid prediction for GeneMark_model.76112_t Valid prediction for GlimmerHMM_glimmerT_44013-T1 Valid prediction for GeneMark_model.76214_t Valid prediction for snap_scaffold_18-snap.2145-T1 Valid prediction for snap_scaffold_18-snap.2139-T1 Valid prediction for snap_scaffold_18-snap.2168-T1 Valid prediction for snap_scaffold_18-snap.2170-T1 Valid prediction for Augustus_model.g29473.t1 Valid prediction for GeneMark_model.76158_t Valid prediction for GeneMark_model.76166_t Valid prediction for GeneMark_model.76222_t Valid prediction for GeneMark_model.76138_t Valid prediction for GeneMark_model.76103_t Couldn't classify 251939, 252159 Sorry, prediction pasa_asmbl_20926.p1 fails validation. (ATG) AC 246746-246787 GT AGG (GCG) AG 247933-248052 GT AGG (CCC) AG 249129-249419 GT AGG (ACA) AG 249838-249911 GT AGG (TGG) AG 250125-250278 GT ATG (ATT) AG 250702-250818 GT TGG (GTG) AG 251087-251197 GT AGG (TTG) AG 251289-251340 GT GGG (GCA) AG 251664-251795 GT TGG (CAG) AG 251939-252159 CT CCC -recovered pasa_asmbl_20926.p1, initial, 246746, 246787 -recovered pasa_asmbl_20926.p1, internal, 247933, 248052 -recovered pasa_asmbl_20926.p1, internal, 249129, 249419 -recovered pasa_asmbl_20926.p1, internal, 249838, 249911 -recovered pasa_asmbl_20926.p1, internal, 250125, 250278 -recovered pasa_asmbl_20926.p1, internal, 250702, 250818 -recovered pasa_asmbl_20926.p1, internal, 251087, 251197 -recovered pasa_asmbl_20926.p1, internal, 251289, 251340 -recovered pasa_asmbl_20926.p1, internal, 251664, 251795 Valid prediction for GeneMark_model.76110_t Valid prediction for GlimmerHMM_glimmerT_44024-T1 Valid prediction for GeneMark_model.76164_t Valid prediction for GlimmerHMM_glimmerT_43994-T1 Couldn't classify 309575, 309663 Sorry, prediction pasa_asmbl_20937.p1 fails validation. (TAC) GG 309575-309663 GT AGG (TTT) AG 310063-310134 GT GGG (AGA) AG 310257-310317 GT AGG (TGG) AG 310415-310447 GT TAG (GCT) AG 310555-310650 GT AGG (GAC) AG 310862-310968 GT CCG (ATT) AG 311171-311222 GT CAG (CTG) AG 311559-311634 GT AGG (GTA) AG 311724-311846 GT CTG (TTG) AG 312529-312557 GT GGG (GGA) AG 312662-312790 GT AGG (GAG) AG 312947-313084 GT TGG (AAG) AG 313338-313379 CT GAC add_exon() Sorry, pasa_asmbl_20937.p1 311559-311634-terminal-3 is invalid. -recovered pasa_asmbl_20937.p1, terminal, 311559, 311634 -recovered pasa_asmbl_20937.p1, terminal, 313338, 313379 -recovered pasa_asmbl_20937.p1, internal, 310063, 310134 -recovered pasa_asmbl_20937.p1, internal, 310257, 310317 -recovered pasa_asmbl_20937.p1, internal, 310415, 310447 -recovered pasa_asmbl_20937.p1, internal, 310555, 310650 -recovered pasa_asmbl_20937.p1, internal, 310862, 310968 -recovered pasa_asmbl_20937.p1, internal, 311171, 311222 -recovered pasa_asmbl_20937.p1, internal, 311559, 311634 -recovered pasa_asmbl_20937.p1, internal, 311724, 311846 -recovered pasa_asmbl_20937.p1, internal, 312529, 312557 -recovered pasa_asmbl_20937.p1, internal, 312662, 312790 -recovered pasa_asmbl_20937.p1, internal, 312947, 313084 Valid prediction for GeneMark_model.76146_t Valid prediction for GeneMark_model.76199_t Valid prediction for GlimmerHMM_glimmerT_44026-T1 Valid prediction for GeneMark_model.76219_t Valid prediction for GlimmerHMM_glimmerT_44035-T1 Valid prediction for HiQ_model.g29477.t1 Valid prediction for GeneMark_model.76136_t Valid prediction for GlimmerHMM_glimmerT_44016-T1 Valid prediction for GeneMark_model.76094_t Valid prediction for GeneMark_model.76131_t Valid prediction for GeneMark_model.76176_t Valid prediction for GeneMark_model.76228_t Couldn't classify 235582, 235670 Couldn't classify 237394, 237482 Sorry, prediction pasa_asmbl_20925.p1 fails validation. (GGG) AG 235582-235670 GT AGG (GTA) AG 236160-236379 GT TGG (GTC) AG 236841-237120 GT ATG (CTG) AG 237394-237482 AC CCA -recovered pasa_asmbl_20925.p1, internal, 235582, 235670 -recovered pasa_asmbl_20925.p1, internal, 236160, 236379 -recovered pasa_asmbl_20925.p1, internal, 236841, 237120 Valid prediction for GlimmerHMM_glimmerT_43997-T1 Valid prediction for GeneMark_model.76113_t Valid prediction for GeneMark_model.76175_t Valid prediction for GlimmerHMM_glimmerT_44037-T1 Valid prediction for GeneMark_model.76142_t Valid prediction for GeneMark_model.76125_t Valid prediction for GeneMark_model.76150_t Valid prediction for GeneMark_model.76187_t Valid prediction for GeneMark_model.76089_t Valid prediction for Augustus_model.g29475.t1 Valid prediction for snap_scaffold_18-snap.2176-T1 Valid prediction for GeneMark_model.76217_t Valid prediction for GlimmerHMM_glimmerT_44033-T1 Valid prediction for GeneMark_model.76236_t Valid prediction for CodingQuarry_transcript_23836-T1 Valid prediction for Augustus_model.g29469.t1 Couldn't classify 230142, 230373 Couldn't classify 231130, 231287 Sorry, prediction pasa_asmbl_20924.p1 fails validation. (TGT) TC 230142-230373 GT AGG (GTA) AG 231130-231287 GT GCG -recovered pasa_asmbl_20924.p1, internal, 231130, 231287 Valid prediction for snap_scaffold_18-snap.2173-T1 Valid prediction for CodingQuarry_transcript_23839-T1 Valid prediction for GlimmerHMM_glimmerT_43998-T1 Valid prediction for GeneMark_model.76122_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 57276, 57276 Sorry, prediction CodingQuarry_transcript_23838-T1 fails validation. (ATG) AG 55484-55540 GT AGG (CTA) AG 55623-55690 GT AGG (ACT) AG 55781-55833 GT CGG (GTG) AG 56048-56155 GT AGG (GTC) AG 56356-56451 GT AGG (TGA) AG 56801-56909 GC TAG (AGA) TC 57276-57276 GA CAG -recovered CodingQuarry_transcript_23838-T1, initial, 55484, 55540 -recovered CodingQuarry_transcript_23838-T1, internal, 55484, 55540 -recovered CodingQuarry_transcript_23838-T1, internal, 55623, 55690 -recovered CodingQuarry_transcript_23838-T1, internal, 55781, 55833 -recovered CodingQuarry_transcript_23838-T1, internal, 56048, 56155 -recovered CodingQuarry_transcript_23838-T1, internal, 56356, 56451 -recovered CodingQuarry_transcript_23838-T1, internal, 56801, 56909 Valid prediction for GeneMark_model.76121_t Valid prediction for GeneMark_model.76084_t Valid prediction for GlimmerHMM_glimmerT_44019-T1 Valid prediction for GeneMark_model.76194_t Valid prediction for snap_scaffold_18-snap.2148-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for snap_scaffold_18-snap.2134-T1 Valid prediction for GeneMark_model.76086_t Valid prediction for GlimmerHMM_glimmerT_43993-T1 Valid prediction for GlimmerHMM_glimmerT_44000-T1 Valid prediction for snap_scaffold_18-snap.2140-T1 Valid prediction for snap_scaffold_18-snap.2169-T1 Valid prediction for GeneMark_model.76207_t Valid prediction for snap_scaffold_18-snap.2123-T1 Valid prediction for snap_scaffold_18-snap.2138-T1 Valid prediction for snap_scaffold_18-snap.2175-T1 Valid prediction for GeneMark_model.76171_t Valid prediction for Augustus_model.g29474.t1 Valid prediction for snap_scaffold_18-snap.2174-T1 Valid prediction for GlimmerHMM_glimmerT_44031-T1 Valid prediction for GeneMark_model.76137_t Valid prediction for GeneMark_model.76157_t Valid prediction for Augustus_model.g29461.t1 Valid prediction for snap_scaffold_18-snap.2167-T1 Valid prediction for GlimmerHMM_glimmerT_44015-T1 Couldn't classify 66180, 66268 Couldn't classify 66617, 66658 Sorry, prediction CodingQuarry_transcript_23837-T1 fails validation. (ATG) TC 65227-65272 GT AGG (GCA) AG 65574-65768 GT AGG (ATT) AG 66180-66268 CG TGC (ACA) TG 66617-66658 CT GAC -recovered CodingQuarry_transcript_23837-T1, initial, 65227, 65272 -recovered CodingQuarry_transcript_23837-T1, internal, 65574, 65768 Valid prediction for GeneMark_model.76179_t Valid prediction for Augustus_model.g29465.t1 Valid prediction for GeneMark_model.76169_t Valid prediction for GeneMark_model.76149_t Valid prediction for GlimmerHMM_glimmerT_44006-T1 Couldn't classify 315104, 315127 Sorry, prediction GeneMark_model.76097_t fails validation. (GAT) AG 315104-315127 GT GGG (GGA) AG 315173-315244 GT GGG (GGG) AG 315269-315289 GT GGG (AGA) AG 315323-315340 GT ACG (GGG) AG 315365-315413 AG GAA -recovered GeneMark_model.76097_t, terminal, 315365, 315413 -recovered GeneMark_model.76097_t, internal, 315104, 315127 -recovered GeneMark_model.76097_t, internal, 315173, 315244 -recovered GeneMark_model.76097_t, internal, 315269, 315289 -recovered GeneMark_model.76097_t, internal, 315323, 315340 Valid prediction for snap_scaffold_18-snap.2153-T1 Valid prediction for GeneMark_model.76114_t Valid prediction for GlimmerHMM_glimmerT_44038-T1 Valid prediction for GeneMark_model.76234_t Valid prediction for GlimmerHMM_glimmerT_44005-T1 Valid prediction for GeneMark_model.76127_t Valid prediction for GeneMark_model.76091_t Valid prediction for snap_scaffold_18-snap.2154-T1 Valid prediction for GeneMark_model.76111_t Valid prediction for GeneMark_model.76196_t Valid prediction for GeneMark_model.76202_t Valid prediction for GeneMark_model.76167_t Valid prediction for GlimmerHMM_glimmerT_43996-T1 Valid prediction for GeneMark_model.76082_t Valid prediction for snap_scaffold_18-snap.2135-T1 Valid prediction for GeneMark_model.76230_t Valid prediction for GeneMark_model.76224_t Valid prediction for GlimmerHMM_glimmerT_44018-T1 Valid prediction for GlimmerHMM_glimmerT_44032-T1 Valid prediction for snap_scaffold_18-snap.2172-T1 Valid prediction for Augustus_model.g29460.t1 Valid prediction for snap_scaffold_18-snap.2124-T1 Valid prediction for GeneMark_model.76215_t Valid prediction for GeneMark_model.76192_t Valid prediction for snap_scaffold_18-snap.2162-T1 Valid prediction for GeneMark_model.76213_t Valid prediction for GeneMark_model.76147_t Valid prediction for GeneMark_model.76185_t Valid prediction for Augustus_model.g29478.t1 Valid prediction for snap_scaffold_18-snap.2144-T1 Valid prediction for snap_scaffold_18-snap.2146-T1 Valid prediction for GeneMark_model.76100_t Couldn't classify 62521, 62740 Sorry, prediction pasa_asmbl_20131.p1 fails validation. (ATG) CC 58512-58530 GT AGG (GCA) AG 58635-58817 GT CGG (ATG) AG 58967-59562 GT TGG (TTT) AG 59961-60091 GT AAG (ATT) AG 60308-60443 GT GGG (GGT) AG 60532-60716 GT AGG (ACG) AG 60815-60889 GT GGG (GAG) AG 61297-61388 GT AGG (GCA) AG 61787-61955 GT AAG (GTA) AG 62521-62740 GT GGG -recovered pasa_asmbl_20131.p1, initial, 58512, 58530 add_exon() Sorry, pasa_asmbl_20131.p1 58967-59562-initial-1 is invalid. -recovered pasa_asmbl_20131.p1, initial, 58967, 59562 -recovered pasa_asmbl_20131.p1, internal, 58635, 58817 -recovered pasa_asmbl_20131.p1, internal, 58967, 59562 -recovered pasa_asmbl_20131.p1, internal, 59961, 60091 -recovered pasa_asmbl_20131.p1, internal, 60308, 60443 -recovered pasa_asmbl_20131.p1, internal, 60532, 60716 -recovered pasa_asmbl_20131.p1, internal, 60815, 60889 -recovered pasa_asmbl_20131.p1, internal, 61297, 61388 -recovered pasa_asmbl_20131.p1, internal, 61787, 61955 -recovered pasa_asmbl_20131.p1, internal, 62521, 62740 Valid prediction for GlimmerHMM_glimmerT_43991-T1 Valid prediction for GeneMark_model.76170_t Couldn't classify 233380, 233668 Couldn't classify 237132, 237206 Sorry, prediction pasa_asmbl_20224.p1 fails validation. (ACC) TC 233380-233668 GT AGG (GCC) AG 234034-234161 GT AGG (GAG) AG 237132-237206 GT AGG -recovered pasa_asmbl_20224.p1, internal, 234034, 234161 -recovered pasa_asmbl_20224.p1, internal, 237132, 237206 Valid prediction for Augustus_model.g29468.t1 Valid prediction for Augustus_model.g29462.t1 Valid prediction for GeneMark_model.76109_t Valid prediction for GeneMark_model.76209_t Valid prediction for GeneMark_model.76223_t Valid prediction for GeneMark_model.76232_t Valid prediction for snap_scaffold_18-snap.2179-T1 Valid prediction for snap_scaffold_18-snap.2158-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GeneMark_model.76133_t Valid prediction for Augustus_model.g29464.t1 Valid prediction for snap_scaffold_18-snap.2160-T1 Valid prediction for GeneMark_model.76155_t Valid prediction for GeneMark_model.76129_t Valid prediction for GeneMark_model.76198_t Valid prediction for Augustus_model.g29467.t1 Valid prediction for GeneMark_model.76206_t Valid prediction for GeneMark_model.76161_t Valid prediction for GeneMark_model.76141_t Valid prediction for GlimmerHMM_glimmerT_44002-T1 Valid prediction for GeneMark_model.76216_t Valid prediction for snap_scaffold_18-snap.2142-T1 Valid prediction for GeneMark_model.76225_t Valid prediction for snap_scaffold_18-snap.2150-T1 Valid prediction for GeneMark_model.76135_t Valid prediction for snap_scaffold_18-snap.2159-T1 Valid prediction for GeneMark_model.76151_t Valid prediction for GeneMark_model.76220_t Valid prediction for snap_scaffold_18-snap.2152-T1 Valid prediction for GeneMark_model.76081_t Valid prediction for GeneMark_model.76186_t Valid prediction for GeneMark_model.76204_t Valid prediction for GeneMark_model.76203_t Valid prediction for GeneMark_model.76118_t Valid prediction for snap_scaffold_18-snap.2132-T1 Valid prediction for snap_scaffold_18-snap.2116-T1 Valid prediction for Augustus_model.g29471.t1 Valid prediction for Augustus_model.g29482.t1 Valid prediction for Augustus_model.g29470.t1 Valid prediction for snap_scaffold_18-snap.2114-T1 Valid prediction for GeneMark_model.76104_t Valid prediction for GlimmerHMM_glimmerT_43995-T1 Valid prediction for Augustus_model.g29479.t1 Valid prediction for GeneMark_model.76153_t Valid prediction for GeneMark_model.76163_t Valid prediction for GeneMark_model.76123_t Valid prediction for GlimmerHMM_glimmerT_44008-T1 Valid prediction for GeneMark_model.76227_t Valid prediction for GeneMark_model.76235_t Valid prediction for GlimmerHMM_glimmerT_44011-T1 Valid prediction for snap_scaffold_18-snap.2161-T1 Valid prediction for pasa_asmbl_20240.p2 Valid prediction for GeneMark_model.76144_t Valid prediction for GeneMark_model.76095_t Valid prediction for snap_scaffold_18-snap.2163-T1 Valid prediction for GeneMark_model.76177_t Couldn't classify 249989, 250126 Couldn't classify 254675, 254869 Sorry, prediction pasa_asmbl_20127.p1 fails validation. (ATA) GC 249989-250126 GT AGG (GAG) AG 250441-250581 GT AGG (ACC) AG 251666-251806 GT GGG (GCC) AG 254675-254869 TG GGT -recovered pasa_asmbl_20127.p1, internal, 250441, 250581 -recovered pasa_asmbl_20127.p1, internal, 251666, 251806 Valid prediction for GeneMark_model.76201_t Valid prediction for snap_scaffold_18-snap.2137-T1 Couldn't classify 237783, 237929 Couldn't classify 240550, 240669 Sorry, prediction pasa_asmbl_20129.p1 fails validation. (ATC) CA 237783-237929 GT AGG (GTT) AG 239007-239099 GT CAG (ATT) AG 240550-240669 GA AGG -recovered pasa_asmbl_20129.p1, internal, 239007, 239099 Valid prediction for GeneMark_model.76173_t Valid prediction for GlimmerHMM_glimmerT_44010-T1 Valid prediction for Augustus_model.g29463.t1 Valid prediction for GlimmerHMM_glimmerT_44027-T1 Valid prediction for GeneMark_model.76098_t Valid prediction for GlimmerHMM_glimmerT_44007-T1 Valid prediction for snap_scaffold_18-snap.2155-T1 Valid prediction for snap_scaffold_18-snap.2120-T1 Valid prediction for GlimmerHMM_glimmerT_44014-T1 Valid prediction for GeneMark_model.76116_t Valid prediction for GeneMark_model.76190_t Valid prediction for GeneMark_model.76132_t Valid prediction for GeneMark_model.76124_t Valid prediction for snap_scaffold_18-snap.2151-T1 Valid prediction for GeneMark_model.76218_t Valid prediction for GlimmerHMM_glimmerT_44003-T1 Valid prediction for GlimmerHMM_glimmerT_44023-T1 Valid prediction for GlimmerHMM_glimmerT_44004-T1 Valid prediction for GlimmerHMM_glimmerT_44017-T1 Valid prediction for GeneMark_model.76183_t Valid prediction for GeneMark_model.76165_t Valid prediction for GeneMark_model.76106_t Valid prediction for GeneMark_model.76181_t Valid prediction for GeneMark_model.76188_t Valid prediction for GeneMark_model.76210_t Valid prediction for snap_scaffold_18-snap.2117-T1 Valid prediction for snap_scaffold_18-snap.2126-T1 Valid prediction for GeneMark_model.76174_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3952, rend_intergenic: 2555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 9866, rend_intergenic: 4494 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17573, rend_intergenic: 10405 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19310, rend_intergenic: 17647 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30212, rend_intergenic: 19432 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63847, rend_intergenic: 30338 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65513, rend_intergenic: 64091 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 70924, rend_intergenic: 65563 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108393, rend_intergenic: 71485 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117365, rend_intergenic: 109126 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120876, rend_intergenic: 117472 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125325, rend_intergenic: 121689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 134789, rend_intergenic: 126075 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136965, rend_intergenic: 135086 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 151408, rend_intergenic: 137082 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153075, rend_intergenic: 152258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154669, rend_intergenic: 153337 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157320, rend_intergenic: 156112 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160335, rend_intergenic: 157932 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173739, rend_intergenic: 160727 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179354, rend_intergenic: 175910 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186048, rend_intergenic: 182390 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 216316, rend_intergenic: 186286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229304, rend_intergenic: 218989 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 263256, rend_intergenic: 229586 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 275032, rend_intergenic: 264999 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 289361, rend_intergenic: 276731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 305871, rend_intergenic: 297816 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 317127, rend_intergenic: 310096 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 347557, rend_intergenic: 319053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 364382 -exon list size: 1902 building trellis 0.1 0.1 0.2 0.2 0.3 0.3 0.4 0.4 0.5 0.5 0.6 0.6 0.7 0.7 0.8 0.8 0.9 0.9 1.0 1.1 1.1 1.2 1.2 1.3 1.3 1.4 1.4 1.5 1.5 1.6 1.6 1.7 1.7 1.8 1.8 1.9 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.3 2.4 2.4 2.5 2.5 2.6 2.6 2.7 2.7 2.8 2.8 2.9 2.9 3.0 3.0 3.1 3.2 3.2 3.3 3.3 3.4 3.4 3.5 3.5 3.6 3.6 3.7 3.7 3.8 3.8 3.9 3.9 4.0 4.0 4.1 4.1 4.2 4.3 4.3 4.4 4.4 4.5 4.5 4.6 4.6 4.7 4.7 4.8 4.8 4.9 4.9 5.0 5.0 5.1 5.1 5.2 5.3 5.3 5.4 5.4 5.5 5.5 5.6 5.6 5.7 5.7 5.8 5.8 5.9 5.9 6.0 6.0 6.1 6.1 6.2 6.2 6.3 6.4 6.4 6.5 6.5 6.6 6.6 6.7 6.7 6.8 6.8 6.9 6.9 7.0 7.0 7.1 7.1 7.2 7.2 7.3 7.4 7.4 7.5 7.5 7.6 7.6 7.7 7.7 7.8 7.8 7.9 7.9 8.0 8.0 8.1 8.1 8.2 8.2 8.3 8.4 8.4 8.5 8.5 8.6 8.6 8.7 8.7 8.8 8.8 8.9 8.9 9.0 9.0 9.1 9.1 9.2 9.2 9.3 9.3 9.4 9.5 9.5 9.6 9.6 9.7 9.7 9.8 9.8 9.9 9.9 10.0 10.0 10.1 10.1 10.2 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.6 10.7 10.7 10.8 10.8 10.9 10.9 11.0 11.0 11.1 11.1 11.2 11.2 11.3 11.3 11.4 11.4 11.5 11.6 11.6 11.7 11.7 11.8 11.8 11.9 11.9 12.0 12.0 12.1 12.1 12.2 12.2 12.3 12.3 12.4 12.4 12.5 12.6 12.6 12.7 12.7 12.8 12.8 12.9 12.9 13.0 13.0 13.1 13.1 13.2 13.2 13.3 13.3 13.4 13.4 13.5 13.6 13.6 13.7 13.7 13.8 13.8 13.9 13.9 14.0 14.0 14.1 14.1 14.2 14.2 14.3 14.3 14.4 14.4 14.5 14.5 14.6 14.7 14.7 14.8 14.8 14.9 14.9 15.0 15.0 15.1 15.1 15.2 15.2 15.3 15.3 15.4 15.4 15.5 15.5 15.6 15.7 15.7 15.8 15.8 15.9 15.9 16.0 16.0 16.1 16.1 16.2 16.2 16.3 16.3 16.4 16.4 16.5 16.5 16.6 16.6 16.7 16.8 16.8 16.9 16.9 17.0 17.0 17.1 17.1 17.2 17.2 17.3 17.3 17.4 17.4 17.5 17.5 17.6 17.6 17.7 17.8 17.8 17.9 17.9 18.0 18.0 18.1 18.1 18.2 18.2 18.3 18.3 18.4 18.4 18.5 18.5 18.6 18.6 18.7 18.8 18.8 18.9 18.9 19.0 19.0 19.1 19.1 19.2 19.2 19.3 19.3 19.4 19.4 19.5 19.5 19.6 19.6 19.7 19.7 19.8 19.9 19.9 20.0 20.0 20.1 20.1 20.2 20.2 20.3 20.3 20.4 20.4 20.5 20.5 20.6 20.6 20.7 20.7 20.8 20.9 20.9 21.0 21.0 21.1 21.1 21.2 21.2 21.3 21.3 21.4 21.4 21.5 21.5 21.6 21.6 21.7 21.7 21.8 21.8 21.9 22.0 22.0 22.1 22.1 22.2 22.2 22.3 22.3 22.4 22.4 22.5 22.5 22.6 22.6 22.7 22.7 22.8 22.8 22.9 23.0 23.0 23.1 23.1 23.2 23.2 23.3 23.3 23.4 23.4 23.5 23.5 23.6 23.6 23.7 23.7 23.8 23.8 23.9 23.9 24.0 24.1 24.1 24.2 24.2 24.3 24.3 24.4 24.4 24.5 24.5 24.6 24.6 24.7 24.7 24.8 24.8 24.9 24.9 25.0 25.1 25.1 25.2 25.2 25.3 25.3 25.4 25.4 25.5 25.5 25.6 25.6 25.7 25.7 25.8 25.8 25.9 25.9 26.0 26.1 26.1 26.2 26.2 26.3 26.3 26.4 26.4 26.5 26.5 26.6 26.6 26.7 26.7 26.8 26.8 26.9 26.9 27.0 27.0 27.1 27.2 27.2 27.3 27.3 27.4 27.4 27.5 27.5 27.6 27.6 27.7 27.7 27.8 27.8 27.9 27.9 28.0 28.0 28.1 28.2 28.2 28.3 28.3 28.4 28.4 28.5 28.5 28.6 28.6 28.7 28.7 28.8 28.8 28.9 28.9 29.0 29.0 29.1 29.1 29.2 29.3 29.3 29.4 29.4 29.5 29.5 29.6 29.6 29.7 29.7 29.8 29.8 29.9 29.9 30.0 30.0 30.1 30.1 30.2 30.3 30.3 30.4 30.4 30.5 30.5 30.6 30.6 30.7 30.7 30.8 30.8 30.9 30.9 31.0 31.0 31.1 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.5 31.6 31.6 31.7 31.7 31.8 31.8 31.9 31.9 32.0 32.0 32.1 32.1 32.2 32.2 32.3 32.4 32.4 32.5 32.5 32.6 32.6 32.7 32.7 32.8 32.8 32.9 32.9 33.0 33.0 33.1 33.1 33.2 33.2 33.3 33.4 33.4 33.5 33.5 33.6 33.6 33.7 33.7 33.8 33.8 33.9 33.9 34.0 34.0 34.1 34.1 34.2 34.2 34.3 34.3 34.4 34.5 34.5 34.6 34.6 34.7 34.7 34.8 34.8 34.9 34.9 35.0 35.0 35.1 35.1 35.2 35.2 35.3 35.3 35.4 35.5 35.5 35.6 35.6 35.7 35.7 35.8 35.8 35.9 35.9 36.0 36.0 36.1 36.1 36.2 36.2 36.3 36.3 36.4 36.4 36.5 36.6 36.6 36.7 36.7 36.8 36.8 36.9 36.9 37.0 37.0 37.1 37.1 37.2 37.2 37.3 37.3 37.4 37.4 37.5 37.6 37.6 37.7 37.7 37.8 37.8 37.9 37.9 38.0 38.0 38.1 38.1 38.2 38.2 38.3 38.3 38.4 38.4 38.5 38.6 38.6 38.7 38.7 38.8 38.8 38.9 38.9 39.0 39.0 39.1 39.1 39.2 39.2 39.3 39.3 39.4 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.8 39.9 39.9 40.0 40.0 40.1 40.1 40.2 40.2 40.3 40.3 40.4 40.4 40.5 40.5 40.6 40.7 40.7 40.8 40.8 40.9 40.9 41.0 41.0 41.1 41.1 41.2 41.2 41.3 41.3 41.4 41.4 41.5 41.5 41.6 41.6 41.7 41.8 41.8 41.9 41.9 42.0 42.0 42.1 42.1 42.2 42.2 42.3 42.3 42.4 42.4 42.5 42.5 42.6 42.6 42.7 42.8 42.8 42.9 42.9 43.0 43.0 43.1 43.1 43.2 43.2 43.3 43.3 43.4 43.4 43.5 43.5 43.6 43.6 43.7 43.8 43.8 43.9 43.9 44.0 44.0 44.1 44.1 44.2 44.2 44.3 44.3 44.4 44.4 44.5 44.5 44.6 44.6 44.7 44.7 44.8 44.9 44.9 45.0 45.0 45.1 45.1 45.2 45.2 45.3 45.3 45.4 45.4 45.5 45.5 45.6 45.6 45.7 45.7 45.8 45.9 45.9 46.0 46.0 46.1 46.1 46.2 46.2 46.3 46.3 46.4 46.4 46.5 46.5 46.6 46.6 46.7 46.7 46.8 46.8 46.9 47.0 47.0 47.1 47.1 47.2 47.2 47.3 47.3 47.4 47.4 47.5 47.5 47.6 47.6 47.7 47.7 47.8 47.8 47.9 48.0 48.0 48.1 48.1 48.2 48.2 48.3 48.3 48.4 48.4 48.5 48.5 48.6 48.6 48.7 48.7 48.8 48.8 48.9 48.9 49.0 49.1 49.1 49.2 49.2 49.3 49.3 49.4 49.4 49.5 49.5 49.6 49.6 49.7 49.7 49.8 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.2 50.3 50.3 50.4 50.4 50.5 50.5 50.6 50.6 50.7 50.7 50.8 50.8 50.9 50.9 51.0 51.1 51.1 51.2 51.2 51.3 51.3 51.4 51.4 51.5 51.5 51.6 51.6 51.7 51.7 51.8 51.8 51.9 51.9 52.0 52.0 52.1 52.2 52.2 52.3 52.3 52.4 52.4 52.5 52.5 52.6 52.6 52.7 52.7 52.8 52.8 52.9 52.9 53.0 53.0 53.1 53.2 53.2 53.3 53.3 53.4 53.4 53.5 53.5 53.6 53.6 53.7 53.7 53.8 53.8 53.9 53.9 54.0 54.0 54.1 54.1 54.2 54.3 54.3 54.4 54.4 54.5 54.5 54.6 54.6 54.7 54.7 54.8 54.8 54.9 54.9 55.0 55.0 55.1 55.1 55.2 55.3 55.3 55.4 55.4 55.5 55.5 55.6 55.6 55.7 55.7 55.8 55.8 55.9 55.9 56.0 56.0 56.1 56.1 56.2 56.2 56.3 56.4 56.4 56.5 56.5 56.6 56.6 56.7 56.7 56.8 56.8 56.9 56.9 57.0 57.0 57.1 57.1 57.2 57.2 57.3 57.4 57.4 57.5 57.5 57.6 57.6 57.7 57.7 57.8 57.8 57.9 57.9 58.0 58.0 58.1 58.1 58.2 58.2 58.3 58.4 58.4 58.5 58.5 58.6 58.6 58.7 58.7 58.8 58.8 58.9 58.9 59.0 59.0 59.1 59.1 59.2 59.2 59.3 59.3 59.4 59.5 59.5 59.6 59.6 59.7 59.7 59.8 59.8 59.9 59.9 60.0 60.0 60.1 60.1 60.2 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.6 60.7 60.7 60.8 60.8 60.9 60.9 61.0 61.0 61.1 61.1 61.2 61.2 61.3 61.3 61.4 61.4 61.5 61.6 61.6 61.7 61.7 61.8 61.8 61.9 61.9 62.0 62.0 62.1 62.1 62.2 62.2 62.3 62.3 62.4 62.4 62.5 62.6 62.6 62.7 62.7 62.8 62.8 62.9 62.9 63.0 63.0 63.1 63.1 63.2 63.2 63.3 63.3 63.4 63.4 63.5 63.6 63.6 63.7 63.7 63.8 63.8 63.9 63.9 64.0 64.0 64.1 64.1 64.2 64.2 64.3 64.3 64.4 64.4 64.5 64.5 64.6 64.7 64.7 64.8 64.8 64.9 64.9 65.0 65.0 65.1 65.1 65.2 65.2 65.3 65.3 65.4 65.4 65.5 65.5 65.6 65.7 65.7 65.8 65.8 65.9 65.9 66.0 66.0 66.1 66.1 66.2 66.2 66.3 66.3 66.4 66.4 66.5 66.5 66.6 66.6 66.7 66.8 66.8 66.9 66.9 67.0 67.0 67.1 67.1 67.2 67.2 67.3 67.3 67.4 67.4 67.5 67.5 67.6 67.6 67.7 67.8 67.8 67.9 67.9 68.0 68.0 68.1 68.1 68.2 68.2 68.3 68.3 68.4 68.4 68.5 68.5 68.6 68.6 68.7 68.8 68.8 68.9 68.9 69.0 69.0 69.1 69.1 69.2 69.2 69.3 69.3 69.4 69.4 69.5 69.5 69.6 69.6 69.7 69.7 69.8 69.9 69.9 70.0 70.0 70.1 70.1 70.2 70.2 70.3 70.3 70.4 70.4 70.5 70.5 70.6 70.6 70.7 70.7 70.8 70.9 70.9 71.0 71.0 71.1 71.1 71.2 71.2 71.3 71.3 71.4 71.4 71.5 71.5 71.6 71.6 71.7 71.7 71.8 71.8 71.9 72.0 72.0 72.1 72.1 72.2 72.2 72.3 72.3 72.4 72.4 72.5 72.5 72.6 72.6 72.7 72.7 72.8 72.8 72.9 73.0 73.0 73.1 73.1 73.2 73.2 73.3 73.3 73.4 73.4 73.5 73.5 73.6 73.6 73.7 73.7 73.8 73.8 73.9 73.9 74.0 74.1 74.1 74.2 74.2 74.3 74.3 74.4 74.4 74.5 74.5 74.6 74.6 74.7 74.7 74.8 74.8 74.9 74.9 75.0 75.1 75.1 75.2 75.2 75.3 75.3 75.4 75.4 75.5 75.5 75.6 75.6 75.7 75.7 75.8 75.8 75.9 75.9 76.0 76.1 76.1 76.2 76.2 76.3 76.3 76.4 76.4 76.5 76.5 76.6 76.6 76.7 76.7 76.8 76.8 76.9 76.9 77.0 77.0 77.1 77.2 77.2 77.3 77.3 77.4 77.4 77.5 77.5 77.6 77.6 77.7 77.7 77.8 77.8 77.9 77.9 78.0 78.0 78.1 78.2 78.2 78.3 78.3 78.4 78.4 78.5 78.5 78.6 78.6 78.7 78.7 78.8 78.8 78.9 78.9 79.0 79.0 79.1 79.1 79.2 79.3 79.3 79.4 79.4 79.5 79.5 79.6 79.6 79.7 79.7 79.8 79.8 79.9 79.9 80.0 80.0 80.1 80.1 80.2 80.3 80.3 80.4 80.4 80.5 80.5 80.6 80.6 80.7 80.7 80.8 80.8 80.9 80.9 81.0 81.0 81.1 81.1 81.2 81.2 81.3 81.4 81.4 81.5 81.5 81.6 81.6 81.7 81.7 81.8 81.8 81.9 81.9 82.0 82.0 82.1 82.1 82.2 82.2 82.3 82.4 82.4 82.5 82.5 82.6 82.6 82.7 82.7 82.8 82.8 82.9 82.9 83.0 83.0 83.1 83.1 83.2 83.2 83.3 83.4 83.4 83.5 83.5 83.6 83.6 83.7 83.7 83.8 83.8 83.9 83.9 84.0 84.0 84.1 84.1 84.2 84.2 84.3 84.3 84.4 84.5 84.5 84.6 84.6 84.7 84.7 84.8 84.8 84.9 84.9 85.0 85.0 85.1 85.1 85.2 85.2 85.3 85.3 85.4 85.5 85.5 85.6 85.6 85.7 85.7 85.8 85.8 85.9 85.9 86.0 86.0 86.1 86.1 86.2 86.2 86.3 86.3 86.4 86.4 86.5 86.6 86.6 86.7 86.7 86.8 86.8 86.9 86.9 87.0 87.0 87.1 87.1 87.2 87.2 87.3 87.3 87.4 87.4 87.5 87.6 87.6 87.7 87.7 87.8 87.8 87.9 87.9 88.0 88.0 88.1 88.1 88.2 88.2 88.3 88.3 88.4 88.4 88.5 88.6 88.6 88.7 88.7 88.8 88.8 88.9 88.9 89.0 89.0 89.1 89.1 89.2 89.2 89.3 89.3 89.4 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.8 89.9 89.9 90.0 90.0 90.1 90.1 90.2 90.2 90.3 90.3 90.4 90.4 90.5 90.5 90.6 90.7 90.7 90.8 90.8 90.9 90.9 91.0 91.0 91.1 91.1 91.2 91.2 91.3 91.3 91.4 91.4 91.5 91.5 91.6 91.6 91.7 91.8 91.8 91.9 91.9 92.0 92.0 92.1 92.1 92.2 92.2 92.3 92.3 92.4 92.4 92.5 92.5 92.6 92.6 92.7 92.8 92.8 92.9 92.9 93.0 93.0 93.1 93.1 93.2 93.2 93.3 93.3 93.4 93.4 93.5 93.5 93.6 93.6 93.7 93.8 93.8 93.9 93.9 94.0 94.0 94.1 94.1 94.2 94.2 94.3 94.3 94.4 94.4 94.5 94.5 94.6 94.6 94.7 94.7 94.8 94.9 94.9 95.0 95.0 95.1 95.1 95.2 95.2 95.3 95.3 95.4 95.4 95.5 95.5 95.6 95.6 95.7 95.7 95.8 95.9 95.9 96.0 96.0 96.1 96.1 96.2 96.2 96.3 96.3 96.4 96.4 96.5 96.5 96.6 96.6 96.7 96.7 96.8 96.8 96.9 97.0 97.0 97.1 97.1 97.2 97.2 97.3 97.3 97.4 97.4 97.5 97.5 97.6 97.6 97.7 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.1 98.2 98.2 98.3 98.3 98.4 98.4 98.5 98.5 98.6 98.6 98.7 98.7 98.8 98.8 98.9 98.9 99.0 99.1 99.1 99.2 99.2 99.3 99.3 99.4 99.4 99.5 99.5 99.6 99.6 99.7 99.7 99.8 99.8 99.9 99.9 -found 93 predictions from path traversal Error with prediction: snap lend_intergenic: 3952, rend_intergenic: 2555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 9866, rend_intergenic: 4494 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17573, rend_intergenic: 10405 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19310, rend_intergenic: 17647 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30212, rend_intergenic: 19432 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63847, rend_intergenic: 30338 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65513, rend_intergenic: 64091 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 70924, rend_intergenic: 65563 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108393, rend_intergenic: 71485 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117365, rend_intergenic: 109126 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120876, rend_intergenic: 117472 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125325, rend_intergenic: 121689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 134789, rend_intergenic: 126075 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136965, rend_intergenic: 135086 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 151408, rend_intergenic: 137082 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153075, rend_intergenic: 152258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154669, rend_intergenic: 153337 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157320, rend_intergenic: 156112 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160335, rend_intergenic: 157932 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173739, rend_intergenic: 160727 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179354, rend_intergenic: 175910 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186048, rend_intergenic: 182390 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 216316, rend_intergenic: 186286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229304, rend_intergenic: 218989 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 263256, rend_intergenic: 229586 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 275032, rend_intergenic: 264999 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 289361, rend_intergenic: 276731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 305871, rend_intergenic: 297816 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 317127, rend_intergenic: 310096 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 347557, rend_intergenic: 319053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 23 predictions persist after filtering for low support -building DP trellis -building trellis in range 352496 - 364382 -exon list size: 22 building trellis 4.2 8.3 12.5 16.7 20.8 25.0 29.2 33.3 37.5 41.7 45.8 50.0 54.2 58.3 62.5 66.7 70.8 75.0 79.2 83.3 87.5 91.7 95.8 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support