-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_18/scaffold_18_9276615-9507465

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.75894_t
Valid prediction for Augustus_model.g29424.t1
Valid prediction for GeneMark_model.75906_t
Valid prediction for snap_scaffold_18-snap.2014-T1
Valid prediction for GeneMark_model.75881_t
Valid prediction for snap_scaffold_18-snap.1998-T1
Valid prediction for GeneMark_model.75925_t
Valid prediction for snap_scaffold_18-snap.1965-T1
Valid prediction for snap_scaffold_18-snap.2016-T1
Valid prediction for snap_scaffold_18-snap.1977-T1
Valid prediction for GeneMark_model.75918_t
Valid prediction for GeneMark_model.75883_t
Valid prediction for snap_scaffold_18-snap.1989-T1
Valid prediction for Augustus_model.g29422.t1
Valid prediction for GlimmerHMM_glimmerT_43943-T1
Valid prediction for snap_scaffold_18-snap.2015-T1
Valid prediction for GeneMark_model.75938_t
Valid prediction for GeneMark_model.75922_t
Valid prediction for Augustus_model.g29433.t1
Valid prediction for GlimmerHMM_glimmerT_43941-T1
Valid prediction for snap_scaffold_18-snap.1981-T1
Valid prediction for GeneMark_model.75890_t
Valid prediction for GeneMark_model.75896_t
Valid prediction for snap_scaffold_18-snap.1971-T1
Valid prediction for GlimmerHMM_glimmerT_43936-T1
Valid prediction for snap_scaffold_18-snap.2005-T1
Valid prediction for GeneMark_model.75913_t
Valid prediction for GeneMark_model.75887_t
Valid prediction for GeneMark_model.75914_t
Valid prediction for Augustus_model.g29429.t1
Valid prediction for snap_scaffold_18-snap.1987-T1
Valid prediction for GlimmerHMM_glimmerT_43944-T1
Valid prediction for GeneMark_model.75940_t
Valid prediction for snap_scaffold_18-snap.2020-T1
Valid prediction for GeneMark_model.75910_t
Valid prediction for Augustus_model.g29421.t1
Valid prediction for GeneMark_model.75916_t
Valid prediction for Augustus_model.g29425.t1
Valid prediction for GlimmerHMM_glimmerT_43942-T1
Valid prediction for GeneMark_model.75923_t
Valid prediction for GlimmerHMM_glimmerT_43931-T1
Valid prediction for GeneMark_model.75949_t
Valid prediction for Augustus_model.g29423.t1
Valid prediction for Augustus_model.g29426.t1
Valid prediction for snap_scaffold_18-snap.1974-T1
Valid prediction for Augustus_model.g29427.t1
Valid prediction for snap_scaffold_18-snap.1990-T1
Valid prediction for GlimmerHMM_glimmerT_43932-T1
Valid prediction for GeneMark_model.75944_t
Valid prediction for snap_scaffold_18-snap.2018-T1
Valid prediction for snap_scaffold_18-snap.1970-T1
Valid prediction for GlimmerHMM_glimmerT_43930-T1
Valid prediction for Augustus_model.g29434.t1
Valid prediction for GeneMark_model.75927_t
Valid prediction for snap_scaffold_18-snap.1995-T1
Valid prediction for GeneMark_model.75920_t
Valid prediction for snap_scaffold_18-snap.2011-T1
Valid prediction for GeneMark_model.75892_t
Valid prediction for GeneMark_model.75902_t
Valid prediction for GeneMark_model.75932_t
Valid prediction for GeneMark_model.75889_t
Valid prediction for GeneMark_model.75909_t
Valid prediction for Augustus_model.g29430.t1
Valid prediction for GeneMark_model.75943_t
Valid prediction for snap_scaffold_18-snap.2003-T1
Valid prediction for GeneMark_model.75930_t
Valid prediction for GeneMark_model.75879_t
Valid prediction for snap_scaffold_18-snap.2001-T1
Valid prediction for snap_scaffold_18-snap.1967-T1
Valid prediction for GeneMark_model.75885_t
Valid prediction for snap_scaffold_18-snap.1994-T1
Valid prediction for snap_scaffold_18-snap.1962-T1
Valid prediction for snap_scaffold_18-snap.1973-T1
Valid prediction for GlimmerHMM_glimmerT_43927-T1
Valid prediction for GeneMark_model.75946_t
Valid prediction for GeneMark_model.75937_t
Valid prediction for GlimmerHMM_glimmerT_43925-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_18-snap.2022-T1
Valid prediction for GlimmerHMM_glimmerT_43937-T1
Valid prediction for snap_scaffold_18-snap.1993-T1
Valid prediction for GeneMark_model.75904_t
Valid prediction for snap_scaffold_18-snap.1985-T1
Valid prediction for snap_scaffold_18-snap.2013-T1
Valid prediction for snap_scaffold_18-snap.2004-T1
Valid prediction for GeneMark_model.75915_t
Valid prediction for snap_scaffold_18-snap.2010-T1
Valid prediction for snap_scaffold_18-snap.1992-T1
Valid prediction for snap_scaffold_18-snap.1991-T1
Valid prediction for GlimmerHMM_glimmerT_43928-T1
Valid prediction for GeneMark_model.75931_t
Valid prediction for snap_scaffold_18-snap.2000-T1
Valid prediction for GeneMark_model.75933_t
Valid prediction for GeneMark_model.75886_t
Valid prediction for Augustus_model.g29418.t1
Valid prediction for GeneMark_model.75905_t
Valid prediction for GeneMark_model.75921_t
Valid prediction for GlimmerHMM_glimmerT_43922-T1
Valid prediction for GeneMark_model.75934_t
Valid prediction for snap_scaffold_18-snap.1988-T1
Valid prediction for snap_scaffold_18-snap.1975-T1
Valid prediction for GeneMark_model.75924_t
Valid prediction for GlimmerHMM_glimmerT_43924-T1
Valid prediction for GeneMark_model.75907_t
Valid prediction for GeneMark_model.75941_t
Valid prediction for GeneMark_model.75893_t
Valid prediction for snap_scaffold_18-snap.1972-T1
Valid prediction for GlimmerHMM_glimmerT_43929-T1
Valid prediction for GeneMark_model.75901_t
Valid prediction for snap_scaffold_18-snap.1979-T1
Valid prediction for snap_scaffold_18-snap.2009-T1
Valid prediction for GeneMark_model.75929_t
Valid prediction for GeneMark_model.75945_t
Valid prediction for GlimmerHMM_glimmerT_43926-T1
Valid prediction for GlimmerHMM_glimmerT_43934-T1
Valid prediction for GeneMark_model.75882_t
Valid prediction for GeneMark_model.75888_t
Valid prediction for GeneMark_model.75897_t
Valid prediction for GeneMark_model.75900_t
Valid prediction for GeneMark_model.75878_t
Valid prediction for GlimmerHMM_glimmerT_43923-T1
Valid prediction for snap_scaffold_18-snap.2023-T1
Valid prediction for snap_scaffold_18-snap.2007-T1
Valid prediction for snap_scaffold_18-snap.1996-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for Augustus_model.g29432.t1
Valid prediction for snap_scaffold_18-snap.1963-T1
Valid prediction for snap_scaffold_18-snap.1980-T1
Valid prediction for Augustus_model.g29431.t1
Valid prediction for GeneMark_model.75936_t
Valid prediction for GeneMark_model.75884_t
Valid prediction for GlimmerHMM_glimmerT_43935-T1
Valid prediction for GeneMark_model.75948_t
Valid prediction for GeneMark_model.75919_t
Valid prediction for GeneMark_model.75899_t
Valid prediction for GeneMark_model.75880_t
Valid prediction for GeneMark_model.75911_t
Valid prediction for GeneMark_model.75947_t
Valid prediction for GeneMark_model.75917_t
Valid prediction for GlimmerHMM_glimmerT_43938-T1
Valid prediction for snap_scaffold_18-snap.2017-T1
Valid prediction for Augustus_model.g29428.t1
Valid prediction for GeneMark_model.75898_t
Valid prediction for Augustus_model.g29420.t1
Valid prediction for snap_scaffold_18-snap.1986-T1
Valid prediction for snap_scaffold_18-snap.1966-T1
Valid prediction for snap_scaffold_18-snap.1982-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_18-snap.2008-T1
Valid prediction for snap_scaffold_18-snap.2019-T1
Valid prediction for GeneMark_model.75891_t
Valid prediction for Augustus_model.g29419.t1
Couldn't classify 85554, 85916
Sorry, prediction pasa_asmbl_20910.p1 fails validation.
(ATG)	 CC	85554-85916	CC	AGC
Valid prediction for GeneMark_model.75912_t
Valid prediction for snap_scaffold_18-snap.1999-T1
Valid prediction for GeneMark_model.75895_t
Valid prediction for GeneMark_model.75926_t
Valid prediction for snap_scaffold_18-snap.2012-T1
Valid prediction for snap_scaffold_18-snap.1984-T1
Valid prediction for snap_scaffold_18-snap.2006-T1
Valid prediction for snap_scaffold_18-snap.2002-T1
Valid prediction for GlimmerHMM_glimmerT_43940-T1
Valid prediction for snap_scaffold_18-snap.1983-T1
Valid prediction for GeneMark_model.75939_t
Valid prediction for snap_scaffold_18-snap.1976-T1
Valid prediction for GlimmerHMM_glimmerT_43933-T1
Valid prediction for GeneMark_model.75903_t
Valid prediction for GlimmerHMM_glimmerT_43921-T1
Valid prediction for GeneMark_model.75908_t
Valid prediction for GeneMark_model.75935_t
Valid prediction for snap_scaffold_18-snap.1997-T1
Valid prediction for snap_scaffold_18-snap.1968-T1
Valid prediction for GeneMark_model.75928_t
Valid prediction for snap_scaffold_18-snap.1969-T1
Valid prediction for snap_scaffold_18-snap.1978-T1
Valid prediction for snap_scaffold_18-snap.1964-T1
Valid prediction for GlimmerHMM_glimmerT_43939-T1
Valid prediction for GlimmerHMM_glimmerT_43920-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 145329, rend_intergenic: 145326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9300, rend_intergenic: 3120  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17611, rend_intergenic: 17337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22971, rend_intergenic: 18055  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29812, rend_intergenic: 22975  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32331, rend_intergenic: 30815  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39563, rend_intergenic: 36519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51495, rend_intergenic: 40349  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57652, rend_intergenic: 51610  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63903, rend_intergenic: 58299  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86323, rend_intergenic: 68206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92907, rend_intergenic: 87646  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100973, rend_intergenic: 94395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121498, rend_intergenic: 113930  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131443, rend_intergenic: 126331  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143425, rend_intergenic: 137244  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145329, rend_intergenic: 143900  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153840, rend_intergenic: 150374  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157044, rend_intergenic: 154346  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159330, rend_intergenic: 157216  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163535, rend_intergenic: 159793  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166229, rend_intergenic: 165064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175610, rend_intergenic: 168502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189559, rend_intergenic: 183976  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195182, rend_intergenic: 189727  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212216, rend_intergenic: 209839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217974, rend_intergenic: 214571  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 230851
-exon list size: 985


building trellis

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59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 53 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 145329, rend_intergenic: 145326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9300, rend_intergenic: 3120  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17611, rend_intergenic: 17337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22971, rend_intergenic: 18055  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29812, rend_intergenic: 22975  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32331, rend_intergenic: 30815  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39563, rend_intergenic: 36519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51495, rend_intergenic: 40349  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57652, rend_intergenic: 51610  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63903, rend_intergenic: 58299  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86323, rend_intergenic: 68206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92907, rend_intergenic: 87646  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100973, rend_intergenic: 94395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121498, rend_intergenic: 113930  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131443, rend_intergenic: 126331  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143425, rend_intergenic: 137244  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145329, rend_intergenic: 143900  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153840, rend_intergenic: 150374  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157044, rend_intergenic: 154346  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159330, rend_intergenic: 157216  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163535, rend_intergenic: 159793  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166229, rend_intergenic: 165064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175610, rend_intergenic: 168502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189559, rend_intergenic: 183976  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195182, rend_intergenic: 189727  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212216, rend_intergenic: 209839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217974, rend_intergenic: 214571  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 12 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 13446
-exon list size: 36


building trellis

2.6    
5.3    
7.9    
10.5    
13.2    
15.8    
18.4    
21.1    
23.7    
26.3    
28.9    
31.6    
34.2    
36.8    
39.5    
42.1    
44.7    
47.4    
50.0    
52.6    
55.3    
57.9    
60.5    
63.2    
65.8    
68.4    
71.1    
73.7    
76.3    
78.9    
81.6    
84.2    
86.8    
89.5    
92.1    
94.7    
97.4    
-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 215422 - 230851
-exon list size: 56


building trellis

1.7    
3.4    
5.2    
6.9    
8.6    
10.3    
12.1    
13.8    
15.5    
17.2    
19.0    
20.7    
22.4    
24.1    
25.9    
27.6    
29.3    
31.0    
32.8    
34.5    
36.2    
37.9    
39.7    
41.4    
43.1    
44.8    
46.6    
48.3    
50.0    
51.7    
53.4    
55.2    
56.9    
58.6    
60.3    
62.1    
63.8    
65.5    
67.2    
69.0    
70.7    
72.4    
74.1    
75.9    
77.6    
79.3    
81.0    
82.8    
84.5    
86.2    
87.9    
89.7    
91.4    
93.1    
94.8    
96.6    
98.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 215422 - 226441
-exon list size: 47


building trellis

2.0    
4.1    
6.1    
8.2    
10.2    
12.2    
14.3    
16.3    
18.4    
20.4    
22.4    
24.5    
26.5    
28.6    
30.6    
32.7    
34.7    
36.7    
38.8    
40.8    
42.9    
44.9    
46.9    
49.0    
51.0    
53.1    
55.1    
57.1    
59.2    
61.2    
63.3    
65.3    
67.3    
69.4    
71.4    
73.5    
75.5    
77.6    
79.6    
81.6    
83.7    
85.7    
87.8    
89.8    
91.8    
93.9    
95.9    
98.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 215422 - 226240
-exon list size: 46


building trellis

2.1    
4.2    
6.2    
8.3    
10.4    
12.5    
14.6    
16.7    
18.8    
20.8    
22.9    
25.0    
27.1    
29.2    
31.2    
33.3    
35.4    
37.5    
39.6    
41.7    
43.8    
45.8    
47.9    
50.0    
52.1    
54.2    
56.2    
58.3    
60.4    
62.5    
64.6    
66.7    
68.8    
70.8    
72.9    
75.0    
77.1    
79.2    
81.2    
83.3    
85.4    
87.5    
89.6    
91.7    
93.8    
95.8    
97.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support