-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_18/scaffold_18_6850299-7060971

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g29174.t1
Valid prediction for GeneMark_model.75246_t
Valid prediction for GeneMark_model.75267_t
Valid prediction for Augustus_model.g29179.t1
Valid prediction for GeneMark_model.75247_t
Valid prediction for snap_scaffold_18-snap.1471-T1
Valid prediction for Augustus_model.g29182.t1
Valid prediction for snap_scaffold_18-snap.1450-T1
Couldn't classify 171505, 171506
Sorry, prediction pasa_asmbl_20734.p1 fails validation.
(ATG)	 CA	171505-171506	GT	ATG
(GTT)	 AG	172134-172223	GT	ACG
(ACT)	 AG	172337-172458	GT	CGG
(GTA)	 AG	172607-172797	TT	AGT
-recovered pasa_asmbl_20734.p1, terminal, 172607, 172797
-recovered pasa_asmbl_20734.p1, internal, 172134, 172223
-recovered pasa_asmbl_20734.p1, internal, 172337, 172458
Couldn't classify 150516, 150623
Sorry, prediction pasa_asmbl_20733.p1 fails validation.
(GAT)	 AG	150516-150623	GT	TGG
(AAC)	 AG	152171-152350	GT	AGG
(GTG)	 AG	152767-152854	GT	GGG
(TGT)	 AG	154320-154435	GT	TGG
(TGG)	 AG	154565-154714	CA	AAC
-recovered pasa_asmbl_20733.p1, terminal, 154565, 154714
-recovered pasa_asmbl_20733.p1, internal, 150516, 150623
-recovered pasa_asmbl_20733.p1, internal, 152171, 152350
-recovered pasa_asmbl_20733.p1, internal, 152767, 152854
-recovered pasa_asmbl_20733.p1, internal, 154320, 154435
Valid prediction for GeneMark_model.75256_t
Valid prediction for CodingQuarry_transcript_23740-T1
Valid prediction for GlimmerHMM_glimmerT_43591-T1
Valid prediction for Augustus_model.g29173.t1
Valid prediction for snap_scaffold_18-snap.1464-T1
Valid prediction for GeneMark_model.75243_t
Valid prediction for GeneMark_model.75271_t
Valid prediction for GeneMark_model.75287_t
Valid prediction for GeneMark_model.75242_t
Valid prediction for GeneMark_model.75241_t
Valid prediction for GeneMark_model.75253_t
Couldn't classify 50969, 51054
Couldn't classify 52480, 52500
Sorry, prediction pasa_asmbl_20720.p1 fails validation.
(AGA)	 AG	50969-51054	GT	AGG
(CTG)	 AG	51214-51358	GT	GGG
(TCC)	 AG	51494-51600	GT	CTG
(ACT)	 AG	51948-52037	GT	CAG
(GGG)	 AG	52136-52250	GT	AGG
(CTG)	 AG	52480-52500	TA	AGT
add_exon() Sorry, pasa_asmbl_20720.p1 50969-51054-terminal-2 is invalid.
-recovered pasa_asmbl_20720.p1, terminal, 50969, 51054
-recovered pasa_asmbl_20720.p1, internal, 50969, 51054
-recovered pasa_asmbl_20720.p1, internal, 51214, 51358
-recovered pasa_asmbl_20720.p1, internal, 51494, 51600
-recovered pasa_asmbl_20720.p1, internal, 51948, 52037
-recovered pasa_asmbl_20720.p1, internal, 52136, 52250
Valid prediction for GlimmerHMM_glimmerT_43578-T1
Valid prediction for GeneMark_model.75283_t
Valid prediction for snap_scaffold_18-snap.1476-T1
Valid prediction for Augustus_model.g29175.t1
Valid prediction for GlimmerHMM_glimmerT_43581-T1
Valid prediction for GlimmerHMM_glimmerT_43595-T1
Valid prediction for GlimmerHMM_glimmerT_43584-T1
Valid prediction for GeneMark_model.75255_t
Valid prediction for GeneMark_model.75262_t
Valid prediction for snap_scaffold_18-snap.1455-T1
Valid prediction for pasa_asmbl_20728.p1
Valid prediction for Augustus_model.g29177.t1
Valid prediction for GlimmerHMM_glimmerT_43590-T1
Couldn't classify 69224, 69245
Couldn't classify 73595, 73815
Sorry, prediction pasa_asmbl_20725.p1 fails validation.
(GGG)	 CC	69224-69245	GT	AGG
(GTG)	 AG	69731-69927	GT	AGG
(ATG)	 AG	70162-70246	GT	AGG
(GGC)	 AG	70778-70980	GT	ACG
(AAG)	 AG	71114-71260	GT	AGG
(ATC)	 AG	71640-71698	GT	AAG
(GGT)	 AG	71897-71965	GT	AAG
(GTC)	 AG	72582-72681	GT	TGG
(GTG)	 AG	72920-73040	GT	AGG
(TGA)	 AG	73595-73815	TA	GGT
-recovered pasa_asmbl_20725.p1, initial, 70162, 70246
-recovered pasa_asmbl_20725.p1, internal, 69731, 69927
-recovered pasa_asmbl_20725.p1, internal, 70162, 70246
-recovered pasa_asmbl_20725.p1, internal, 70778, 70980
-recovered pasa_asmbl_20725.p1, internal, 71114, 71260
-recovered pasa_asmbl_20725.p1, internal, 71640, 71698
-recovered pasa_asmbl_20725.p1, internal, 71897, 71965
-recovered pasa_asmbl_20725.p1, internal, 72582, 72681
-recovered pasa_asmbl_20725.p1, internal, 72920, 73040
Valid prediction for CodingQuarry_transcript_23741-T1
Valid prediction for Augustus_model.g29172.t1
Valid prediction for GeneMark_model.75284_t
Valid prediction for Augustus_model.g29184.t1
Valid prediction for GeneMark_model.75258_t
Valid prediction for GeneMark_model.75251_t
Valid prediction for GeneMark_model.75286_t
Valid prediction for GeneMark_model.75248_t
Valid prediction for GlimmerHMM_glimmerT_43604-T1
Valid prediction for GeneMark_model.75240_t
Valid prediction for GlimmerHMM_glimmerT_43600-T1
Valid prediction for GeneMark_model.75235_t
Valid prediction for snap_scaffold_18-snap.1441-T1
Valid prediction for Augustus_model.g29186.t1
Valid prediction for HiQ_model.g29170.t1
Valid prediction for Augustus_model.g29168.t1
Valid prediction for pasa_asmbl_20736.p1
Valid prediction for Augustus_model.g29166.t1
Couldn't classify 171505, 171506
Sorry, prediction CodingQuarry_transcript_23742-T1 fails validation.
(ATG)	 CA	171505-171506	GT	ATG
(GTT)	 AG	172134-172223	GT	ACG
(ACT)	 AG	172337-172458	GT	CGG
(GTA)	 AG	172607-172797	TT	AGT
-recovered CodingQuarry_transcript_23742-T1, terminal, 172607, 172797
-recovered CodingQuarry_transcript_23742-T1, internal, 172134, 172223
-recovered CodingQuarry_transcript_23742-T1, internal, 172337, 172458
Valid prediction for snap_scaffold_18-snap.1447-T1
Valid prediction for snap_scaffold_18-snap.1459-T1
Valid prediction for GlimmerHMM_glimmerT_43602-T1
Valid prediction for snap_scaffold_18-snap.1468-T1
Valid prediction for snap_scaffold_18-snap.1445-T1
Valid prediction for Augustus_model.g29176.t1
Valid prediction for snap_scaffold_18-snap.1439-T1
Valid prediction for GlimmerHMM_glimmerT_43576-T1
Valid prediction for Augustus_model.g29167.t1
Valid prediction for snap_scaffold_18-snap.1438-T1
Valid prediction for snap_scaffold_18-snap.1449-T1
Valid prediction for GlimmerHMM_glimmerT_43603-T1
Valid prediction for GeneMark_model.75275_t
Valid prediction for Augustus_model.g29178.t1
Couldn't classify 44237, 44344
Couldn't classify 47989, 48068
Sorry, prediction pasa_asmbl_20719.p1 fails validation.
(GTG)	 AG	44237-44344	GT	TGG
(GTC)	 AG	46739-46922	GT	GAG
(GAG)	 AG	47989-48068	TG	GGT
-recovered pasa_asmbl_20719.p1, internal, 44237, 44344
-recovered pasa_asmbl_20719.p1, internal, 46739, 46922
Valid prediction for GeneMark_model.75281_t
Valid prediction for Augustus_model.g29187.t1
Valid prediction for GlimmerHMM_glimmerT_43580-T1
Valid prediction for GeneMark_model.75264_t
Couldn't classify 54864, 54916
Sorry, prediction pasa_asmbl_20722.p1 fails validation.
(CGG)	 GA	54864-54916	GT	TCG
(ACA)	 AG	55365-55422	GT	AGG
(ATA)	 AG	55552-55609	GT	ATG
(CGA)	 AG	55809-55949	GT	AGG
(GTG)	 AG	56034-56121	GT	GGG
(GTC)	 AG	56279-56367	GT	AGG
(ACA)	 AG	56657-56700	AG	GAA
-recovered pasa_asmbl_20722.p1, terminal, 56657, 56700
-recovered pasa_asmbl_20722.p1, internal, 55365, 55422
-recovered pasa_asmbl_20722.p1, internal, 55552, 55609
-recovered pasa_asmbl_20722.p1, internal, 55809, 55949
-recovered pasa_asmbl_20722.p1, internal, 56034, 56121
-recovered pasa_asmbl_20722.p1, internal, 56279, 56367
Valid prediction for HiQ_model.g29164.t1
Valid prediction for snap_scaffold_18-snap.1474-T1
Valid prediction for GeneMark_model.75244_t
Valid prediction for snap_scaffold_18-snap.1477-T1
Valid prediction for GeneMark_model.75252_t
Valid prediction for GlimmerHMM_glimmerT_43582-T1
Valid prediction for GlimmerHMM_glimmerT_43589-T1
Valid prediction for GlimmerHMM_glimmerT_43586-T1
Valid prediction for snap_scaffold_18-snap.1478-T1
Valid prediction for GeneMark_model.75268_t
Valid prediction for GeneMark_model.75237_t
Valid prediction for GeneMark_model.75270_t
Valid prediction for GeneMark_model.75273_t
Valid prediction for Augustus_model.g29169.t1
Valid prediction for snap_scaffold_18-snap.1460-T1
Valid prediction for snap_scaffold_18-snap.1446-T1
Valid prediction for GlimmerHMM_glimmerT_43583-T1
Valid prediction for CodingQuarry_transcript_23743-T1
Valid prediction for GeneMark_model.75277_t
Valid prediction for HiQ_model.g29171.t1
Valid prediction for GeneMark_model.75239_t
Valid prediction for snap_scaffold_18-snap.1462-T1
Valid prediction for snap_scaffold_18-snap.1463-T1
Valid prediction for GeneMark_model.75260_t
Valid prediction for GlimmerHMM_glimmerT_43592-T1
Valid prediction for GeneMark_model.75279_t
Valid prediction for GeneMark_model.75266_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_18-snap.1436-T1
Valid prediction for snap_scaffold_18-snap.1456-T1
Valid prediction for snap_scaffold_18-snap.1442-T1
Valid prediction for HiQ_model.g29185.t1
Valid prediction for GeneMark_model.75236_t
Valid prediction for snap_scaffold_18-snap.1473-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_43587-T1
Valid prediction for snap_scaffold_18-snap.1461-T1
Valid prediction for snap_scaffold_18-snap.1467-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_18-snap.1444-T1
Valid prediction for GeneMark_model.75254_t
Valid prediction for GlimmerHMM_glimmerT_43601-T1
Valid prediction for GeneMark_model.75238_t
Valid prediction for snap_scaffold_18-snap.1465-T1
Valid prediction for GeneMark_model.75261_t
Valid prediction for snap_scaffold_18-snap.1451-T1
Valid prediction for GlimmerHMM_glimmerT_43588-T1
Valid prediction for Augustus_model.g29165.t1
Valid prediction for GlimmerHMM_glimmerT_43577-T1
Valid prediction for GeneMark_model.75280_t
Valid prediction for GlimmerHMM_glimmerT_43597-T1
Valid prediction for GeneMark_model.75249_t
Valid prediction for GlimmerHMM_glimmerT_43593-T1
Valid prediction for GlimmerHMM_glimmerT_43585-T1
Valid prediction for snap_scaffold_18-snap.1458-T1
Valid prediction for GeneMark_model.75269_t
Valid prediction for pasa_asmbl_19956.p1
Valid prediction for GeneMark_model.75285_t
Valid prediction for GeneMark_model.75250_t
Valid prediction for Augustus_model.g29183.t1
Valid prediction for GeneMark_model.75272_t
Valid prediction for snap_scaffold_18-snap.1475-T1
Valid prediction for GlimmerHMM_glimmerT_43594-T1
Valid prediction for snap_scaffold_18-snap.1469-T1
Valid prediction for GeneMark_model.75282_t
Valid prediction for snap_scaffold_18-snap.1448-T1
Valid prediction for GeneMark_model.75278_t
Valid prediction for GlimmerHMM_glimmerT_43596-T1
Valid prediction for snap_scaffold_18-snap.1466-T1
Valid prediction for snap_scaffold_18-snap.1454-T1
Valid prediction for GeneMark_model.75259_t
Valid prediction for snap_scaffold_18-snap.1472-T1
Valid prediction for GeneMark_model.75276_t
Valid prediction for snap_scaffold_18-snap.1443-T1
Valid prediction for GeneMark_model.75245_t
Valid prediction for snap_scaffold_18-snap.1437-T1
Valid prediction for GlimmerHMM_glimmerT_43598-T1
Valid prediction for snap_scaffold_18-snap.1479-T1
Valid prediction for snap_scaffold_18-snap.1440-T1
Valid prediction for Augustus_model.g29181.t1
Valid prediction for GeneMark_model.75274_t
Valid prediction for Augustus_model.g29180.t1
Valid prediction for snap_scaffold_18-snap.1452-T1
Valid prediction for GeneMark_model.75263_t
Valid prediction for snap_scaffold_18-snap.1457-T1
Valid prediction for GlimmerHMM_glimmerT_43579-T1
Valid prediction for snap_scaffold_18-snap.1453-T1
Valid prediction for CodingQuarry_transcript_23744-T1
Valid prediction for snap_scaffold_18-snap.1470-T1
Valid prediction for GeneMark_model.75257_t
Valid prediction for GlimmerHMM_glimmerT_43599-T1
Valid prediction for GeneMark_model.75265_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6658, rend_intergenic: 4631  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19550, rend_intergenic: 14008  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34107, rend_intergenic: 33890  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54030, rend_intergenic: 45908  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73818, rend_intergenic: 60674  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83373, rend_intergenic: 79394  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112210, rend_intergenic: 83595  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128263, rend_intergenic: 123301  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137013, rend_intergenic: 128846  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154714, rend_intergenic: 145077  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163497, rend_intergenic: 162036  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204947, rend_intergenic: 202090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 210673
-exon list size: 800


building trellis

0.1    
0.2    
0.4    
0.5    
0.6    
0.7    
0.9    
1.0    
1.1    
1.2    
1.4    
1.5    
1.6    
1.7    
1.9    
2.0    
2.1    
2.2    
2.4    
2.5    
2.6    
2.7    
2.9    
3.0    
3.1    
3.2    
3.4    
3.5    
3.6    
3.7    
3.9    
4.0    
4.1    
4.2    
4.4    
4.5    
4.6    
4.7    
4.9    
5.0    
5.1    
5.2    
5.4    
5.5    
5.6    
5.7    
5.9    
6.0    
6.1    
6.2    
6.4    
6.5    
6.6    
6.7    
6.9    
7.0    
7.1    
7.2    
7.4    
7.5    
7.6    
7.7    
7.9    
8.0    
8.1    
8.2    
8.4    
8.5    
8.6    
8.7    
8.9    
9.0    
9.1    
9.2    
9.4    
9.5    
9.6    
9.7    
9.9    
10.0    
10.1    
10.2    
10.3    
10.5    
10.6    
10.7    
10.8    
11.0    
11.1    
11.2    
11.3    
11.5    
11.6    
11.7    
11.8    
12.0    
12.1    
12.2    
12.3    
12.5    
12.6    
12.7    
12.8    
13.0    
13.1    
13.2    
13.3    
13.5    
13.6    
13.7    
13.8    
14.0    
14.1    
14.2    
14.3    
14.5    
14.6    
14.7    
14.8    
15.0    
15.1    
15.2    
15.3    
15.5    
15.6    
15.7    
15.8    
16.0    
16.1    
16.2    
16.3    
16.5    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.3    
17.5    
17.6    
17.7    
17.8    
18.0    
18.1    
18.2    
18.3    
18.5    
18.6    
18.7    
18.8    
19.0    
19.1    
19.2    
19.3    
19.5    
19.6    
19.7    
19.8    
20.0    
20.1    
20.2    
20.3    
20.4    
20.6    
20.7    
20.8    
20.9    
21.1    
21.2    
21.3    
21.4    
21.6    
21.7    
21.8    
21.9    
22.1    
22.2    
22.3    
22.4    
22.6    
22.7    
22.8    
22.9    
23.1    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.6    
25.7    
25.8    
25.9    
26.1    
26.2    
26.3    
26.4    
26.6    
26.7    
26.8    
26.9    
27.1    
27.2    
27.3    
27.4    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
28.9    
29.1    
29.2    
29.3    
29.4    
29.6    
29.7    
29.8    
29.9    
30.0    
30.2    
30.3    
30.4    
30.5    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.5    
31.7    
31.8    
31.9    
32.0    
32.2    
32.3    
32.4    
32.5    
32.7    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.7    
33.8    
33.9    
34.0    
34.2    
34.3    
34.4    
34.5    
34.7    
34.8    
34.9    
35.0    
35.2    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.2    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.5    
38.7    
38.8    
38.9    
39.0    
39.2    
39.3    
39.4    
39.5    
39.7    
39.8    
39.9    
40.0    
40.1    
40.3    
40.4    
40.5    
40.6    
40.8    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.1    
43.3    
43.4    
43.5    
43.6    
43.8    
43.9    
44.0    
44.1    
44.3    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.6    
47.8    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.2    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.7    
55.9    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.1    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.6    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 35 predictions from path traversal
Error with prediction: snap lend_intergenic: 6658, rend_intergenic: 4631  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19550, rend_intergenic: 14008  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34107, rend_intergenic: 33890  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54030, rend_intergenic: 45908  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73818, rend_intergenic: 60674  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83373, rend_intergenic: 79394  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112210, rend_intergenic: 83595  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128263, rend_intergenic: 123301  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137013, rend_intergenic: 128846  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154714, rend_intergenic: 145077  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163497, rend_intergenic: 162036  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204947, rend_intergenic: 202090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support