-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_18/scaffold_18_4062204-4398293

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.74438_t
Valid prediction for CodingQuarry_transcript_23680-T1
Valid prediction for CodingQuarry_transcript_23679-T1
Valid prediction for GeneMark_model.74525_t
Valid prediction for GeneMark_model.74522_t
Valid prediction for GlimmerHMM_glimmerT_43151-T1
Valid prediction for GlimmerHMM_glimmerT_43127-T1
Valid prediction for snap_scaffold_18-snap.843-T1
Valid prediction for GeneMark_model.74546_t
Valid prediction for snap_scaffold_18-snap.866-T1
Valid prediction for GeneMark_model.74518_t
Valid prediction for snap_scaffold_18-snap.842-T1
Valid prediction for GeneMark_model.74489_t
Valid prediction for GeneMark_model.74501_t
Valid prediction for GeneMark_model.74439_t
Valid prediction for GlimmerHMM_glimmerT_43147-T1
Valid prediction for snap_scaffold_18-snap.852-T1
Valid prediction for GeneMark_model.74483_t
Valid prediction for GeneMark_model.74505_t
Valid prediction for Augustus_model.g28858.t1
Valid prediction for HiQ_model.g28846.t1
Valid prediction for CodingQuarry_transcript_23678-T1
Couldn't classify 240319, 240442
Sorry, prediction pasa_asmbl_20536.p1 fails validation.
(ATG)	 CA	238876-239034	GT	GGG
(GAG)	 AG	239379-239419	GT	AGG
(GCT)	 AG	240319-240442	CG	CCC
-recovered pasa_asmbl_20536.p1, initial, 238876, 239034
-recovered pasa_asmbl_20536.p1, internal, 239379, 239419
Valid prediction for GeneMark_model.74532_t
Valid prediction for pasa_asmbl_20531.p1
Valid prediction for Augustus_model.g28860.t1
Valid prediction for snap_scaffold_18-snap.854-T1
Valid prediction for snap_scaffold_18-snap.856-T1
Valid prediction for GeneMark_model.74503_t
Valid prediction for snap_scaffold_18-snap.844-T1
Valid prediction for GlimmerHMM_glimmerT_43144-T1
Valid prediction for snap_scaffold_18-snap.849-T1
Couldn't classify 60431, 60513
Sorry, prediction pasa_asmbl_20527.p1 fails validation.
(GAC)	 CA	60431-60513	GT	AGG
(AAA)	 AG	60955-61077	GT	GGG
(GGA)	 AG	61764-61879	GT	AGG
(CTG)	 AG	62009-62162	GT	AGG
(AGG)	 AG	62540-62762	CG	AAC
-recovered pasa_asmbl_20527.p1, terminal, 62540, 62762
-recovered pasa_asmbl_20527.p1, internal, 60955, 61077
-recovered pasa_asmbl_20527.p1, internal, 61764, 61879
-recovered pasa_asmbl_20527.p1, internal, 62009, 62162
Valid prediction for GlimmerHMM_glimmerT_43130-T1
Valid prediction for Augustus_model.g28857.t1
Valid prediction for GeneMark_model.74491_t
Valid prediction for GeneMark_model.74456_t
Valid prediction for GeneMark_model.74460_t
Valid prediction for GlimmerHMM_glimmerT_43153-T1
Valid prediction for GeneMark_model.74481_t
Valid prediction for snap_scaffold_18-snap.828-T1
Valid prediction for GeneMark_model.74544_t
Valid prediction for HiQ_model.g28838.t1
Valid prediction for GlimmerHMM_glimmerT_43152-T1
Valid prediction for GeneMark_model.74477_t
Valid prediction for snap_scaffold_18-snap.858-T1
Valid prediction for GlimmerHMM_glimmerT_43135-T1
Valid prediction for snap_scaffold_18-snap.867-T1
Valid prediction for GeneMark_model.74530_t
Valid prediction for GeneMark_model.74513_t
Valid prediction for GeneMark_model.74459_t
Valid prediction for CodingQuarry_transcript_23675-T1
Valid prediction for snap_scaffold_18-snap.841-T1
Valid prediction for GeneMark_model.74469_t
Valid prediction for snap_scaffold_18-snap.871-T1
Valid prediction for snap_scaffold_18-snap.864-T1
Valid prediction for pasa_asmbl_20535.p1
Valid prediction for GlimmerHMM_glimmerT_43121-T1
Valid prediction for snap_scaffold_18-snap.853-T1
Valid prediction for GeneMark_model.74516_t
Valid prediction for GeneMark_model.74499_t
Valid prediction for GeneMark_model.74535_t
Valid prediction for GlimmerHMM_glimmerT_43138-T1
Valid prediction for GeneMark_model.74470_t
Valid prediction for GeneMark_model.74449_t
Valid prediction for GeneMark_model.74435_t
Valid prediction for GeneMark_model.74520_t
Valid prediction for snap_scaffold_18-snap.880-T1
Valid prediction for GlimmerHMM_glimmerT_43112-T1
Valid prediction for GeneMark_model.74452_t
Valid prediction for GlimmerHMM_glimmerT_43145-T1
Valid prediction for snap_scaffold_18-snap.834-T1
Valid prediction for snap_scaffold_18-snap.851-T1
Valid prediction for GeneMark_model.74534_t
Valid prediction for snap_scaffold_18-snap.850-T1
Valid prediction for GeneMark_model.74514_t
Valid prediction for snap_scaffold_18-snap.846-T1
Valid prediction for GeneMark_model.74486_t
Valid prediction for GeneMark_model.74479_t
Valid prediction for GeneMark_model.74464_t
Valid prediction for GeneMark_model.74462_t
Valid prediction for GeneMark_model.74540_t
Valid prediction for snap_scaffold_18-snap.838-T1
Valid prediction for GeneMark_model.74472_t
Valid prediction for GeneMark_model.74497_t
Valid prediction for GeneMark_model.74527_t
Valid prediction for GlimmerHMM_glimmerT_43132-T1
Valid prediction for GeneMark_model.74509_t
Valid prediction for GlimmerHMM_glimmerT_43118-T1
Valid prediction for GeneMark_model.74542_t
Couldn't classify 244846, 244904
Couldn't classify 246292, 246591
Sorry, prediction pasa_asmbl_20537.p1 fails validation.
(CAT)	 TC	244846-244904	GT	AAG
(TCT)	 AG	245695-245863	GT	AGG
(GGA)	 AG	246066-246194	GT	AGG
(GAC)	 AG	246292-246591	CC	TCC
-recovered pasa_asmbl_20537.p1, internal, 245695, 245863
-recovered pasa_asmbl_20537.p1, internal, 246066, 246194
Valid prediction for snap_scaffold_18-snap.857-T1
Valid prediction for CodingQuarry_transcript_23681-T1
Valid prediction for GeneMark_model.74511_t
Valid prediction for Augustus_model.g28852.t1
Valid prediction for GeneMark_model.74487_t
Valid prediction for snap_scaffold_18-snap.830-T1
Valid prediction for GeneMark_model.74467_t
Valid prediction for GeneMark_model.74545_t
Valid prediction for GeneMark_model.74538_t
Valid prediction for GeneMark_model.74528_t
Valid prediction for GeneMark_model.74457_t
Valid prediction for GlimmerHMM_glimmerT_43136-T1
Valid prediction for GeneMark_model.74446_t
Valid prediction for GlimmerHMM_glimmerT_43119-T1
Valid prediction for Augustus_model.g28856.t1
Valid prediction for GeneMark_model.74474_t
Valid prediction for snap_scaffold_18-snap.877-T1
Valid prediction for snap_scaffold_18-snap.837-T1
Valid prediction for GeneMark_model.74539_t
Valid prediction for HiQ_model.g28848.t1
Valid prediction for GeneMark_model.74493_t
Valid prediction for GlimmerHMM_glimmerT_43120-T1
Valid prediction for Augustus_model.g28861.t1
Valid prediction for Augustus_model.g28862.t1
Couldn't classify 91501, 91572
Couldn't classify 91741, 92163
Sorry, prediction pasa_asmbl_20532.p1 fails validation.
(TCG)	 CG	91501-91572	GT	TGG
(GTC)	 AG	91741-92163	CC	CCC
Valid prediction for GeneMark_model.74465_t
Valid prediction for GlimmerHMM_glimmerT_43146-T1
Valid prediction for snap_scaffold_18-snap.860-T1
Valid prediction for GlimmerHMM_glimmerT_43125-T1
Valid prediction for GeneMark_model.74484_t
Valid prediction for snap_scaffold_18-snap.862-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for GeneMark_model.74476_t
Valid prediction for GeneMark_model.74447_t
Valid prediction for GlimmerHMM_glimmerT_43140-T1
Valid prediction for snap_scaffold_18-snap.861-T1
Valid prediction for snap_scaffold_18-snap.847-T1
Valid prediction for GeneMark_model.74443_t
Valid prediction for GeneMark_model.74494_t
Valid prediction for GlimmerHMM_glimmerT_43117-T1
Valid prediction for GlimmerHMM_glimmerT_43154-T1
Valid prediction for pasa_asmbl_20518.p1
Couldn't classify 56964, 57119
Couldn't classify 57598, 57767
Couldn't classify 60015, 60289
Sorry, prediction pasa_asmbl_20523.p1 fails validation.
(ATG)	 AA	55243-55302	GT	AGG
(GAA)	 AG	56287-56496	GT	GGG
(TGG)	 AG	56659-56762	GT	GGG
(GTT)	 AG	56964-57119	AT	ACA
(ACA)	 AC	57598-57767	GT	CGG
(GGT)	 AG	58332-58445	GT	AGG
(GTG)	 AG	60015-60289	CC	GCC
-recovered pasa_asmbl_20523.p1, initial, 55243, 55302
-recovered pasa_asmbl_20523.p1, internal, 56287, 56496
-recovered pasa_asmbl_20523.p1, internal, 56659, 56762
-recovered pasa_asmbl_20523.p1, internal, 58332, 58445
Valid prediction for Augustus_model.g28847.t1
Valid prediction for Augustus_model.g28845.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_43116-T1
Valid prediction for snap_scaffold_18-snap.855-T1
Valid prediction for GeneMark_model.74451_t
Valid prediction for snap_scaffold_18-snap.878-T1
Valid prediction for snap_scaffold_18-snap.875-T1
Valid prediction for snap_scaffold_18-snap.865-T1
Valid prediction for GeneMark_model.74533_t
Valid prediction for GeneMark_model.74455_t
Valid prediction for GeneMark_model.74478_t
Valid prediction for GeneMark_model.74507_t
Valid prediction for GeneMark_model.74444_t
Valid prediction for GlimmerHMM_glimmerT_43150-T1
Valid prediction for Augustus_model.g28841.t1
Valid prediction for snap_scaffold_18-snap.845-T1
Valid prediction for GeneMark_model.74526_t
Valid prediction for GeneMark_model.74466_t
Valid prediction for snap_scaffold_18-snap.832-T1
Valid prediction for GlimmerHMM_glimmerT_43126-T1
Valid prediction for CodingQuarry_transcript_23677-T1
Valid prediction for Augustus_model.g28850.t1
Valid prediction for GeneMark_model.74442_t
Valid prediction for GeneMark_model.74529_t
Valid prediction for GeneMark_model.74502_t
Valid prediction for GeneMark_model.74450_t
Valid prediction for GlimmerHMM_glimmerT_43122-T1
Valid prediction for Augustus_model.g28849.t1
Valid prediction for Augustus_model.g28855.t1
Couldn't classify 281692, 281754
Sorry, prediction pasa_asmbl_20257.p1 fails validation.
(TCC)	 CA	281692-281754	GT	TGG
(GCT)	 AG	282908-282982	GT	TTG
(TCC)	 AG	283068-283133	GT	TGG
(GAC)	 AG	283254-283365	GT	TGG
(ACA)	 AG	283495-283571	GT	GGG
(GAA)	 AG	283682-283794	GT	GGG
(AAA)	 AG	284052-284254	GT	AGG
(GTT)	 AG	284402-284502	GT	AGG
(ATC)	 AG	284652-284779	GT	AGG
(GCA)	 AG	284979-285082	GT	AGG
(GTG)	 AG	285206-285454	GT	GGG
(GCT)	 AG	285607-285710	GT	TGG
(CTG)	 AG	285802-285901	GT	CGG
(ACA)	 AG	286007-286148	GT	AGG
(GAA)	 AG	286328-286358	TG	AGT
-recovered pasa_asmbl_20257.p1, terminal, 286328, 286358
-recovered pasa_asmbl_20257.p1, internal, 282908, 282982
-recovered pasa_asmbl_20257.p1, internal, 283068, 283133
-recovered pasa_asmbl_20257.p1, internal, 283254, 283365
-recovered pasa_asmbl_20257.p1, internal, 283495, 283571
-recovered pasa_asmbl_20257.p1, internal, 283682, 283794
-recovered pasa_asmbl_20257.p1, internal, 284052, 284254
-recovered pasa_asmbl_20257.p1, internal, 284402, 284502
-recovered pasa_asmbl_20257.p1, internal, 284652, 284779
-recovered pasa_asmbl_20257.p1, internal, 284979, 285082
-recovered pasa_asmbl_20257.p1, internal, 285206, 285454
-recovered pasa_asmbl_20257.p1, internal, 285607, 285710
-recovered pasa_asmbl_20257.p1, internal, 285802, 285901
-recovered pasa_asmbl_20257.p1, internal, 286007, 286148
Valid prediction for snap_scaffold_18-snap.879-T1
Valid prediction for GeneMark_model.74524_t
Valid prediction for GlimmerHMM_glimmerT_43143-T1
Valid prediction for GeneMark_model.74517_t
Valid prediction for snap_scaffold_18-snap.840-T1
Valid prediction for pasa_asmbl_19826.p1
Valid prediction for CodingQuarry_transcript_23674-T1
Valid prediction for snap_scaffold_18-snap.881-T1
Valid prediction for HiQ_model.g28844.t1
Valid prediction for CodingQuarry_transcript_23673-T1
Valid prediction for GlimmerHMM_glimmerT_43134-T1
Valid prediction for GlimmerHMM_glimmerT_43133-T1
Valid prediction for GeneMark_model.74498_t
Valid prediction for GlimmerHMM_glimmerT_43142-T1
Valid prediction for HiQ_model.g28843.t1
Valid prediction for pasa_asmbl_19832.p1
Valid prediction for GeneMark_model.74543_t
Valid prediction for GeneMark_model.74504_t
Valid prediction for GlimmerHMM_glimmerT_43139-T1
Valid prediction for snap_scaffold_18-snap.831-T1
Valid prediction for snap_scaffold_18-snap.876-T1
Valid prediction for GeneMark_model.74440_t
Valid prediction for snap_scaffold_18-snap.874-T1
Valid prediction for GeneMark_model.74461_t
Valid prediction for Augustus_model.g28853.t1
Valid prediction for GeneMark_model.74436_t
Valid prediction for GeneMark_model.74492_t
Valid prediction for Augustus_model.g28839.t1
Valid prediction for snap_scaffold_18-snap.827-T1
Valid prediction for GlimmerHMM_glimmerT_43115-T1
Valid prediction for snap_scaffold_18-snap.836-T1
Valid prediction for GeneMark_model.74441_t
Valid prediction for GeneMark_model.74445_t
Valid prediction for snap_scaffold_18-snap.882-T1
Valid prediction for GeneMark_model.74468_t
Valid prediction for GeneMark_model.74523_t
Valid prediction for snap_scaffold_18-snap.833-T1
Valid prediction for GeneMark_model.74531_t
Valid prediction for Augustus_model.g28840.t1
Valid prediction for GeneMark_model.74448_t
Couldn't classify 55778, 55991
Couldn't classify 57398, 57537
Sorry, prediction pasa_asmbl_19837.p1 fails validation.
(CTC)	 CC	55778-55991	GT	AGG
(GAG)	 AG	57398-57537	GG	GCG
Valid prediction for GlimmerHMM_glimmerT_43131-T1
Valid prediction for GlimmerHMM_glimmerT_43148-T1
Valid prediction for GeneMark_model.74488_t
Valid prediction for GeneMark_model.74521_t
Couldn't classify 306486, 306533
Sorry, prediction pasa_asmbl_19828.p1 fails validation.
(GAT)	 AG	306486-306533	GT	AGG
(ATC)	 AG	306860-306974	GT	CGG
(TGG)	 AG	307451-307522	GT	CCG
(ACC)	 AG	307724-307803	GT	ATG
(GCC)	 AG	307944-308022	GT	AGG
(CGG)	 AG	308556-308729	GT	ACG
(GTC)	 AG	309004-309080	CA	AAC
-recovered pasa_asmbl_19828.p1, terminal, 309004, 309080
-recovered pasa_asmbl_19828.p1, internal, 306486, 306533
-recovered pasa_asmbl_19828.p1, internal, 306860, 306974
-recovered pasa_asmbl_19828.p1, internal, 307451, 307522
-recovered pasa_asmbl_19828.p1, internal, 307724, 307803
-recovered pasa_asmbl_19828.p1, internal, 307944, 308022
-recovered pasa_asmbl_19828.p1, internal, 308556, 308729
Valid prediction for GeneMark_model.74485_t
Valid prediction for GlimmerHMM_glimmerT_43123-T1
Valid prediction for GeneMark_model.74463_t
Valid prediction for GeneMark_model.74536_t
Valid prediction for GlimmerHMM_glimmerT_43129-T1
Valid prediction for GeneMark_model.74475_t
Valid prediction for snap_scaffold_18-snap.873-T1
Valid prediction for GeneMark_model.74473_t
Valid prediction for snap_scaffold_18-snap.835-T1
Valid prediction for GeneMark_model.74458_t
Valid prediction for GeneMark_model.74508_t
Valid prediction for GeneMark_model.74519_t
Valid prediction for GeneMark_model.74515_t
Valid prediction for GlimmerHMM_glimmerT_43114-T1
Valid prediction for GlimmerHMM_glimmerT_43111-T1
Valid prediction for GeneMark_model.74490_t
Valid prediction for snap_scaffold_18-snap.848-T1
Valid prediction for snap_scaffold_18-snap.863-T1
Valid prediction for GlimmerHMM_glimmerT_43141-T1
Valid prediction for GeneMark_model.74482_t
Valid prediction for GlimmerHMM_glimmerT_43124-T1
Valid prediction for GeneMark_model.74495_t
Valid prediction for Augustus_model.g28851.t1
Valid prediction for GeneMark_model.74512_t
Valid prediction for snap_scaffold_18-snap.872-T1
Valid prediction for Augustus_model.g28854.t1
Valid prediction for snap_scaffold_18-snap.839-T1
Valid prediction for GeneMark_model.74471_t
Valid prediction for snap_scaffold_18-snap.869-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GeneMark_model.74454_t
Valid prediction for snap_scaffold_18-snap.868-T1
Valid prediction for GlimmerHMM_glimmerT_43128-T1
Valid prediction for GlimmerHMM_glimmerT_43137-T1
Valid prediction for snap_scaffold_18-snap.859-T1
Valid prediction for GeneMark_model.74453_t
Valid prediction for GeneMark_model.74500_t
Valid prediction for GeneMark_model.74506_t
Valid prediction for GeneMark_model.74537_t
Valid prediction for Augustus_model.g28842.t1
Valid prediction for GlimmerHMM_glimmerT_43149-T1
Valid prediction for GlimmerHMM_glimmerT_43113-T1
Valid prediction for snap_scaffold_18-snap.829-T1
Valid prediction for GeneMark_model.74541_t
Valid prediction for Augustus_model.g28859.t1
Valid prediction for GeneMark_model.74510_t
Valid prediction for HiQ_model.g28837.t1
Valid prediction for GeneMark_model.74480_t
Valid prediction for GeneMark_model.74437_t
Valid prediction for snap_scaffold_18-snap.870-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16055, rend_intergenic: 13470  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25973, rend_intergenic: 24465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30938, rend_intergenic: 26909  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44277, rend_intergenic: 37337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53171, rend_intergenic: 49961  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92988, rend_intergenic: 75744  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111064, rend_intergenic: 108651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146698, rend_intergenic: 112995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149405, rend_intergenic: 146748  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164937, rend_intergenic: 151600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179178, rend_intergenic: 165090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 211282, rend_intergenic: 179521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216709, rend_intergenic: 213911  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236262, rend_intergenic: 227137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 248169, rend_intergenic: 241395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254947, rend_intergenic: 250805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 273971, rend_intergenic: 255054  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 281214, rend_intergenic: 278363  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 316658, rend_intergenic: 281967  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 333017, rend_intergenic: 320424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 336090
-exon list size: 1378


building trellis

0.1    
0.1    
0.2    
0.3    
0.4    
0.4    
0.5    
0.6    
0.7    
0.7    
0.8    
0.9    
0.9    
1.0    
1.1    
1.2    
1.2    
1.3    
1.4    
1.4    
1.5    
1.6    
1.7    
1.7    
1.8    
1.9    
2.0    
2.0    
2.1    
2.2    
2.2    
2.3    
2.4    
2.5    
2.5    
2.6    
2.7    
2.8    
2.8    
2.9    
3.0    
3.0    
3.1    
3.2    
3.3    
3.3    
3.4    
3.5    
3.6    
3.6    
3.7    
3.8    
3.8    
3.9    
4.0    
4.1    
4.1    
4.2    
4.3    
4.3    
4.4    
4.5    
4.6    
4.6    
4.7    
4.8    
4.9    
4.9    
5.0    
5.1    
5.1    
5.2    
5.3    
5.4    
5.4    
5.5    
5.6    
5.7    
5.7    
5.8    
5.9    
5.9    
6.0    
6.1    
6.2    
6.2    
6.3    
6.4    
6.4    
6.5    
6.6    
6.7    
6.7    
6.8    
6.9    
7.0    
7.0    
7.1    
7.2    
7.2    
7.3    
7.4    
7.5    
7.5    
7.6    
7.7    
7.8    
7.8    
7.9    
8.0    
8.0    
8.1    
8.2    
8.3    
8.3    
8.4    
8.5    
8.6    
8.6    
8.7    
8.8    
8.8    
8.9    
9.0    
9.1    
9.1    
9.2    
9.3    
9.3    
9.4    
9.5    
9.6    
9.6    
9.7    
9.8    
9.9    
9.9    
10.0    
10.1    
10.1    
10.2    
10.3    
10.4    
10.4    
10.5    
10.6    
10.7    
10.7    
10.8    
10.9    
10.9    
11.0    
11.1    
11.2    
11.2    
11.3    
11.4    
11.4    
11.5    
11.6    
11.7    
11.7    
11.8    
11.9    
12.0    
12.0    
12.1    
12.2    
12.2    
12.3    
12.4    
12.5    
12.5    
12.6    
12.7    
12.8    
12.8    
12.9    
13.0    
13.0    
13.1    
13.2    
13.3    
13.3    
13.4    
13.5    
13.6    
13.6    
13.7    
13.8    
13.8    
13.9    
14.0    
14.1    
14.1    
14.2    
14.3    
14.3    
14.4    
14.5    
14.6    
14.6    
14.7    
14.8    
14.9    
14.9    
15.0    
15.1    
15.1    
15.2    
15.3    
15.4    
15.4    
15.5    
15.6    
15.7    
15.7    
15.8    
15.9    
15.9    
16.0    
16.1    
16.2    
16.2    
16.3    
16.4    
16.4    
16.5    
16.6    
16.7    
16.7    
16.8    
16.9    
17.0    
17.0    
17.1    
17.2    
17.2    
17.3    
17.4    
17.5    
17.5    
17.6    
17.7    
17.8    
17.8    
17.9    
18.0    
18.0    
18.1    
18.2    
18.3    
18.3    
18.4    
18.5    
18.6    
18.6    
18.7    
18.8    
18.8    
18.9    
19.0    
19.1    
19.1    
19.2    
19.3    
19.3    
19.4    
19.5    
19.6    
19.6    
19.7    
19.8    
19.9    
19.9    
20.0    
20.1    
20.1    
20.2    
20.3    
20.4    
20.4    
20.5    
20.6    
20.7    
20.7    
20.8    
20.9    
20.9    
21.0    
21.1    
21.2    
21.2    
21.3    
21.4    
21.4    
21.5    
21.6    
21.7    
21.7    
21.8    
21.9    
22.0    
22.0    
22.1    
22.2    
22.2    
22.3    
22.4    
22.5    
22.5    
22.6    
22.7    
22.8    
22.8    
22.9    
23.0    
23.0    
23.1    
23.2    
23.3    
23.3    
23.4    
23.5    
23.6    
23.6    
23.7    
23.8    
23.8    
23.9    
24.0    
24.1    
24.1    
24.2    
24.3    
24.3    
24.4    
24.5    
24.6    
24.6    
24.7    
24.8    
24.9    
24.9    
25.0    
25.1    
25.1    
25.2    
25.3    
25.4    
25.4    
25.5    
25.6    
25.7    
25.7    
25.8    
25.9    
25.9    
26.0    
26.1    
26.2    
26.2    
26.3    
26.4    
26.4    
26.5    
26.6    
26.7    
26.7    
26.8    
26.9    
27.0    
27.0    
27.1    
27.2    
27.2    
27.3    
27.4    
27.5    
27.5    
27.6    
27.7    
27.8    
27.8    
27.9    
28.0    
28.0    
28.1    
28.2    
28.3    
28.3    
28.4    
28.5    
28.6    
28.6    
28.7    
28.8    
28.8    
28.9    
29.0    
29.1    
29.1    
29.2    
29.3    
29.3    
29.4    
29.5    
29.6    
29.6    
29.7    
29.8    
29.9    
29.9    
30.0    
30.1    
30.1    
30.2    
30.3    
30.4    
30.4    
30.5    
30.6    
30.7    
30.7    
30.8    
30.9    
30.9    
31.0    
31.1    
31.2    
31.2    
31.3    
31.4    
31.4    
31.5    
31.6    
31.7    
31.7    
31.8    
31.9    
32.0    
32.0    
32.1    
32.2    
32.2    
32.3    
32.4    
32.5    
32.5    
32.6    
32.7    
32.8    
32.8    
32.9    
33.0    
33.0    
33.1    
33.2    
33.3    
33.3    
33.4    
33.5    
33.6    
33.6    
33.7    
33.8    
33.8    
33.9    
34.0    
34.1    
34.1    
34.2    
34.3    
34.3    
34.4    
34.5    
34.6    
34.6    
34.7    
34.8    
34.9    
34.9    
35.0    
35.1    
35.1    
35.2    
35.3    
35.4    
35.4    
35.5    
35.6    
35.7    
35.7    
35.8    
35.9    
35.9    
36.0    
36.1    
36.2    
36.2    
36.3    
36.4    
36.4    
36.5    
36.6    
36.7    
36.7    
36.8    
36.9    
37.0    
37.0    
37.1    
37.2    
37.2    
37.3    
37.4    
37.5    
37.5    
37.6    
37.7    
37.8    
37.8    
37.9    
38.0    
38.0    
38.1    
38.2    
38.3    
38.3    
38.4    
38.5    
38.6    
38.6    
38.7    
38.8    
38.8    
38.9    
39.0    
39.1    
39.1    
39.2    
39.3    
39.3    
39.4    
39.5    
39.6    
39.6    
39.7    
39.8    
39.9    
39.9    
40.0    
40.1    
40.1    
40.2    
40.3    
40.4    
40.4    
40.5    
40.6    
40.7    
40.7    
40.8    
40.9    
40.9    
41.0    
41.1    
41.2    
41.2    
41.3    
41.4    
41.4    
41.5    
41.6    
41.7    
41.7    
41.8    
41.9    
42.0    
42.0    
42.1    
42.2    
42.2    
42.3    
42.4    
42.5    
42.5    
42.6    
42.7    
42.8    
42.8    
42.9    
43.0    
43.0    
43.1    
43.2    
43.3    
43.3    
43.4    
43.5    
43.6    
43.6    
43.7    
43.8    
43.8    
43.9    
44.0    
44.1    
44.1    
44.2    
44.3    
44.3    
44.4    
44.5    
44.6    
44.6    
44.7    
44.8    
44.9    
44.9    
45.0    
45.1    
45.1    
45.2    
45.3    
45.4    
45.4    
45.5    
45.6    
45.7    
45.7    
45.8    
45.9    
45.9    
46.0    
46.1    
46.2    
46.2    
46.3    
46.4    
46.4    
46.5    
46.6    
46.7    
46.7    
46.8    
46.9    
47.0    
47.0    
47.1    
47.2    
47.2    
47.3    
47.4    
47.5    
47.5    
47.6    
47.7    
47.8    
47.8    
47.9    
48.0    
48.0    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.6    
48.6    
48.7    
48.8    
48.8    
48.9    
49.0    
49.1    
49.1    
49.2    
49.3    
49.3    
49.4    
49.5    
49.6    
49.6    
49.7    
49.8    
49.9    
49.9    
50.0    
50.1    
50.1    
50.2    
50.3    
50.4    
50.4    
50.5    
50.6    
50.7    
50.7    
50.8    
50.9    
50.9    
51.0    
51.1    
51.2    
51.2    
51.3    
51.4    
51.4    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
52.0    
52.0    
52.1    
52.2    
52.2    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
52.8    
52.9    
53.0    
53.0    
53.1    
53.2    
53.3    
53.3    
53.4    
53.5    
53.6    
53.6    
53.7    
53.8    
53.8    
53.9    
54.0    
54.1    
54.1    
54.2    
54.3    
54.3    
54.4    
54.5    
54.6    
54.6    
54.7    
54.8    
54.9    
54.9    
55.0    
55.1    
55.1    
55.2    
55.3    
55.4    
55.4    
55.5    
55.6    
55.7    
55.7    
55.8    
55.9    
55.9    
56.0    
56.1    
56.2    
56.2    
56.3    
56.4    
56.4    
56.5    
56.6    
56.7    
56.7    
56.8    
56.9    
57.0    
57.0    
57.1    
57.2    
57.2    
57.3    
57.4    
57.5    
57.5    
57.6    
57.7    
57.8    
57.8    
57.9    
58.0    
58.0    
58.1    
58.2    
58.3    
58.3    
58.4    
58.5    
58.6    
58.6    
58.7    
58.8    
58.8    
58.9    
59.0    
59.1    
59.1    
59.2    
59.3    
59.3    
59.4    
59.5    
59.6    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.1    
60.2    
60.3    
60.4    
60.4    
60.5    
60.6    
60.7    
60.7    
60.8    
60.9    
60.9    
61.0    
61.1    
61.2    
61.2    
61.3    
61.4    
61.4    
61.5    
61.6    
61.7    
61.7    
61.8    
61.9    
62.0    
62.0    
62.1    
62.2    
62.2    
62.3    
62.4    
62.5    
62.5    
62.6    
62.7    
62.8    
62.8    
62.9    
63.0    
63.0    
63.1    
63.2    
63.3    
63.3    
63.4    
63.5    
63.6    
63.6    
63.7    
63.8    
63.8    
63.9    
64.0    
64.1    
64.1    
64.2    
64.3    
64.3    
64.4    
64.5    
64.6    
64.6    
64.7    
64.8    
64.9    
64.9    
65.0    
65.1    
65.1    
65.2    
65.3    
65.4    
65.4    
65.5    
65.6    
65.7    
65.7    
65.8    
65.9    
65.9    
66.0    
66.1    
66.2    
66.2    
66.3    
66.4    
66.4    
66.5    
66.6    
66.7    
66.7    
66.8    
66.9    
67.0    
67.0    
67.1    
67.2    
67.2    
67.3    
67.4    
67.5    
67.5    
67.6    
67.7    
67.8    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.3    
68.3    
68.4    
68.5    
68.6    
68.6    
68.7    
68.8    
68.8    
68.9    
69.0    
69.1    
69.1    
69.2    
69.3    
69.3    
69.4    
69.5    
69.6    
69.6    
69.7    
69.8    
69.9    
69.9    
70.0    
70.1    
70.1    
70.2    
70.3    
70.4    
70.4    
70.5    
70.6    
70.7    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.2    
71.2    
71.3    
71.4    
71.4    
71.5    
71.6    
71.7    
71.7    
71.8    
71.9    
72.0    
72.0    
72.1    
72.2    
72.2    
72.3    
72.4    
72.5    
72.5    
72.6    
72.7    
72.8    
72.8    
72.9    
73.0    
73.0    
73.1    
73.2    
73.3    
73.3    
73.4    
73.5    
73.6    
73.6    
73.7    
73.8    
73.8    
73.9    
74.0    
74.1    
74.1    
74.2    
74.3    
74.3    
74.4    
74.5    
74.6    
74.6    
74.7    
74.8    
74.9    
74.9    
75.0    
75.1    
75.1    
75.2    
75.3    
75.4    
75.4    
75.5    
75.6    
75.7    
75.7    
75.8    
75.9    
75.9    
76.0    
76.1    
76.2    
76.2    
76.3    
76.4    
76.4    
76.5    
76.6    
76.7    
76.7    
76.8    
76.9    
77.0    
77.0    
77.1    
77.2    
77.2    
77.3    
77.4    
77.5    
77.5    
77.6    
77.7    
77.8    
77.8    
77.9    
78.0    
78.0    
78.1    
78.2    
78.3    
78.3    
78.4    
78.5    
78.6    
78.6    
78.7    
78.8    
78.8    
78.9    
79.0    
79.1    
79.1    
79.2    
79.3    
79.3    
79.4    
79.5    
79.6    
79.6    
79.7    
79.8    
79.9    
79.9    
80.0    
80.1    
80.1    
80.2    
80.3    
80.4    
80.4    
80.5    
80.6    
80.7    
80.7    
80.8    
80.9    
80.9    
81.0    
81.1    
81.2    
81.2    
81.3    
81.4    
81.4    
81.5    
81.6    
81.7    
81.7    
81.8    
81.9    
82.0    
82.0    
82.1    
82.2    
82.2    
82.3    
82.4    
82.5    
82.5    
82.6    
82.7    
82.8    
82.8    
82.9    
83.0    
83.0    
83.1    
83.2    
83.3    
83.3    
83.4    
83.5    
83.6    
83.6    
83.7    
83.8    
83.8    
83.9    
84.0    
84.1    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.6    
84.6    
84.7    
84.8    
84.9    
84.9    
85.0    
85.1    
85.1    
85.2    
85.3    
85.4    
85.4    
85.5    
85.6    
85.7    
85.7    
85.8    
85.9    
85.9    
86.0    
86.1    
86.2    
86.2    
86.3    
86.4    
86.4    
86.5    
86.6    
86.7    
86.7    
86.8    
86.9    
87.0    
87.0    
87.1    
87.2    
87.2    
87.3    
87.4    
87.5    
87.5    
87.6    
87.7    
87.8    
87.8    
87.9    
88.0    
88.0    
88.1    
88.2    
88.3    
88.3    
88.4    
88.5    
88.6    
88.6    
88.7    
88.8    
88.8    
88.9    
89.0    
89.1    
89.1    
89.2    
89.3    
89.3    
89.4    
89.5    
89.6    
89.6    
89.7    
89.8    
89.9    
89.9    
90.0    
90.1    
90.1    
90.2    
90.3    
90.4    
90.4    
90.5    
90.6    
90.7    
90.7    
90.8    
90.9    
90.9    
91.0    
91.1    
91.2    
91.2    
91.3    
91.4    
91.4    
91.5    
91.6    
91.7    
91.7    
91.8    
91.9    
92.0    
92.0    
92.1    
92.2    
92.2    
92.3    
92.4    
92.5    
92.5    
92.6    
92.7    
92.8    
92.8    
92.9    
93.0    
93.0    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.6    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.1    
94.1    
94.2    
94.3    
94.3    
94.4    
94.5    
94.6    
94.6    
94.7    
94.8    
94.9    
94.9    
95.0    
95.1    
95.1    
95.2    
95.3    
95.4    
95.4    
95.5    
95.6    
95.7    
95.7    
95.8    
95.9    
95.9    
96.0    
96.1    
96.2    
96.2    
96.3    
96.4    
96.4    
96.5    
96.6    
96.7    
96.7    
96.8    
96.9    
97.0    
97.0    
97.1    
97.2    
97.2    
97.3    
97.4    
97.5    
97.5    
97.6    
97.7    
97.8    
97.8    
97.9    
98.0    
98.0    
98.1    
98.2    
98.3    
98.3    
98.4    
98.5    
98.6    
98.6    
98.7    
98.8    
98.8    
98.9    
99.0    
99.1    
99.1    
99.2    
99.3    
99.3    
99.4    
99.5    
99.6    
99.6    
99.7    
99.8    
99.9    
99.9    
-found 65 predictions from path traversal
Error with prediction: snap lend_intergenic: 16055, rend_intergenic: 13470  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25973, rend_intergenic: 24465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30938, rend_intergenic: 26909  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44277, rend_intergenic: 37337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53171, rend_intergenic: 49961  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92988, rend_intergenic: 75744  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111064, rend_intergenic: 108651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146698, rend_intergenic: 112995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149405, rend_intergenic: 146748  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164937, rend_intergenic: 151600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179178, rend_intergenic: 165090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 211282, rend_intergenic: 179521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216709, rend_intergenic: 213911  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236262, rend_intergenic: 227137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 248169, rend_intergenic: 241395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254947, rend_intergenic: 250805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 273971, rend_intergenic: 255054  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 281214, rend_intergenic: 278363  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 316658, rend_intergenic: 281967  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 333017, rend_intergenic: 320424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support