-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_18/scaffold_18_1865457-2117114

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_18-snap.390-T1
Valid prediction for GeneMark_model.73992_t
Valid prediction for snap_scaffold_18-snap.413-T1
Valid prediction for GeneMark_model.73963_t
Valid prediction for snap_scaffold_18-snap.396-T1
Valid prediction for GlimmerHMM_glimmerT_42822-T1
Valid prediction for CodingQuarry_transcript_23640-T1
Valid prediction for GeneMark_model.73960_t
Valid prediction for snap_scaffold_18-snap.386-T1
Valid prediction for GeneMark_model.73981_t
Valid prediction for GeneMark_model.73988_t
Valid prediction for GlimmerHMM_glimmerT_42806-T1
Couldn't classify 1768, 1882
Couldn't classify 2192, 2326
Sorry, prediction pasa_asmbl_21113.p1 fails validation.
(GAG)	 AG	1768-1882	GT	TGG
(CTG)	 AG	2009-2073	GT	TGG
(ACA)	 AG	2192-2326	GT	AGG
-recovered pasa_asmbl_21113.p1, internal, 1768, 1882
-recovered pasa_asmbl_21113.p1, internal, 2009, 2073
-recovered pasa_asmbl_21113.p1, internal, 2192, 2326
Valid prediction for snap_scaffold_18-snap.404-T1
Valid prediction for GeneMark_model.73989_t
Valid prediction for GeneMark_model.73970_t
Valid prediction for GeneMark_model.73973_t
Valid prediction for GeneMark_model.73956_t
Valid prediction for GlimmerHMM_glimmerT_42807-T1
Valid prediction for GeneMark_model.74000_t
Valid prediction for snap_scaffold_18-snap.410-T1
Valid prediction for snap_scaffold_18-snap.412-T1
Valid prediction for CodingQuarry_transcript_23637-T1
Couldn't classify 6091, 6237
Couldn't classify 6883, 6923
Sorry, prediction pasa_asmbl_21154.p1 fails validation.
(TTC)	 GC	6091-6237	GT	AGG
(GAT)	 AG	6374-6544	GT	AGG
(GTT)	 AG	6670-6793	GT	GGG
(GAG)	 AG	6883-6923	GG	CAG
-recovered pasa_asmbl_21154.p1, internal, 6374, 6544
-recovered pasa_asmbl_21154.p1, internal, 6670, 6793
Valid prediction for pasa_asmbl_20424.p1
Valid prediction for snap_scaffold_18-snap.415-T1
Valid prediction for snap_scaffold_18-snap.426-T1
Valid prediction for GeneMark_model.73975_t
Valid prediction for snap_scaffold_18-snap.391-T1
Valid prediction for Augustus_model.g28654.t1
Couldn't classify 8640, 8698
Couldn't classify 9806, 9878
Sorry, prediction pasa_asmbl_20414.p1 fails validation.
(GTC)	 AA	8640-8698	GT	ATG
(GTT)	 AG	8834-9053	GT	AGG
(GAT)	 AG	9203-9316	GT	TGG
(CCT)	 AG	9425-9510	GT	AAG
(GTT)	 AG	9596-9694	GT	AGG
(GAA)	 AG	9806-9878	GA	GGG
-recovered pasa_asmbl_20414.p1, terminal, 9425, 9510
-recovered pasa_asmbl_20414.p1, internal, 8834, 9053
-recovered pasa_asmbl_20414.p1, internal, 9203, 9316
-recovered pasa_asmbl_20414.p1, internal, 9425, 9510
-recovered pasa_asmbl_20414.p1, internal, 9596, 9694
Valid prediction for Augustus_model.g28650.t1
Couldn't classify 7818, 8318
Sorry, prediction pasa_asmbl_20413.p1 fails validation.
(GCT)	 TG	7818-8318	AG	ACA
Valid prediction for CodingQuarry_transcript_23631-T1
Valid prediction for GeneMark_model.74001_t
Valid prediction for Augustus_model.g28652.t1
Valid prediction for CodingQuarry_transcript_23634-T1
Valid prediction for HiQ_model.g28648.t1
Valid prediction for CodingQuarry_transcript_23633-T1
Valid prediction for GeneMark_model.73955_t
Valid prediction for snap_scaffold_18-snap.419-T1
Valid prediction for GlimmerHMM_glimmerT_42821-T1
Valid prediction for snap_scaffold_18-snap.407-T1
Valid prediction for snap_scaffold_18-snap.418-T1
Valid prediction for CodingQuarry_transcript_23623-T1
Valid prediction for GlimmerHMM_glimmerT_42798-T1
Valid prediction for GlimmerHMM_glimmerT_42791-T1
Valid prediction for GlimmerHMM_glimmerT_42824-T1
Valid prediction for GlimmerHMM_glimmerT_42803-T1
Valid prediction for snap_scaffold_18-snap.401-T1
Valid prediction for GeneMark_model.73965_t
Valid prediction for snap_scaffold_18-snap.395-T1
Valid prediction for HiQ_model.g28643.t1
Valid prediction for GlimmerHMM_glimmerT_42812-T1
Valid prediction for GlimmerHMM_glimmerT_42816-T1
Valid prediction for GlimmerHMM_glimmerT_42819-T1
Valid prediction for GeneMark_model.73996_t
Valid prediction for GlimmerHMM_glimmerT_42809-T1
Valid prediction for snap_scaffold_18-snap.387-T1
Valid prediction for GlimmerHMM_glimmerT_42814-T1
Valid prediction for HiQ_model.g28639.t1
Valid prediction for GeneMark_model.73982_t
Valid prediction for pasa_asmbl_20421.p1
Valid prediction for GlimmerHMM_glimmerT_42804-T1
Valid prediction for GlimmerHMM_glimmerT_42799-T1
Valid prediction for snap_scaffold_18-snap.421-T1
Valid prediction for GlimmerHMM_glimmerT_42827-T1
Valid prediction for HiQ_model.g28644.t1
Valid prediction for snap_scaffold_18-snap.409-T1
Valid prediction for snap_scaffold_18-snap.427-T1
Valid prediction for pasa_asmbl_20418.p1
Valid prediction for GeneMark_model.73984_t
Valid prediction for Augustus_model.g28657.t1
Valid prediction for snap_scaffold_18-snap.424-T1
Valid prediction for GeneMark_model.73966_t
Couldn't classify 241312, 241372
Couldn't classify 242252, 242395
Sorry, prediction pasa_asmbl_21100.p1 fails validation.
(GGT)	 TT	241312-241372	GT	CAG
(ATA)	 AG	241856-241953	GT	GGG
(GAG)	 AG	242252-242395	GG	GGG
-recovered pasa_asmbl_21100.p1, internal, 241856, 241953
Valid prediction for Augustus_model.g28640.t1
Valid prediction for snap_scaffold_18-snap.422-T1
Valid prediction for Augustus_model.g28659.t1
Valid prediction for CodingQuarry_transcript_23630-T1
Valid prediction for GeneMark_model.73980_t
Valid prediction for snap_scaffold_18-snap.381-T1
Valid prediction for pasa_asmbl_20429.p2
Valid prediction for snap_scaffold_18-snap.425-T1
Valid prediction for GeneMark_model.73998_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_42797-T1
Valid prediction for snap_scaffold_18-snap.423-T1
Valid prediction for Augustus_model.g28655.t1
Couldn't classify 54427, 54623
Couldn't classify 56621, 56698
Sorry, prediction pasa_asmbl_19737.p1 fails validation.
(ACC)	 CC	54427-54623	GT	AGG
(TGT)	 AG	54744-54883	GT	TGG
(ACG)	 AG	55422-55603	GT	AGG
(GCA)	 AG	55758-55796	GT	AGG
(GGT)	 AG	56227-56427	GT	AGG
(AGT)	 AG	56621-56698	GG	GGG
-recovered pasa_asmbl_19737.p1, internal, 54744, 54883
-recovered pasa_asmbl_19737.p1, internal, 55422, 55603
-recovered pasa_asmbl_19737.p1, internal, 55758, 55796
-recovered pasa_asmbl_19737.p1, internal, 56227, 56427
Valid prediction for snap_scaffold_18-snap.398-T1
Valid prediction for CodingQuarry_transcript_23638-T1
Valid prediction for GeneMark_model.74002_t
Valid prediction for snap_scaffold_18-snap.400-T1
Valid prediction for Augustus_model.g28637.t1
Valid prediction for snap_scaffold_18-snap.417-T1
Valid prediction for GeneMark_model.73983_t
Valid prediction for GlimmerHMM_glimmerT_42810-T1
Valid prediction for GlimmerHMM_glimmerT_42796-T1
Valid prediction for GlimmerHMM_glimmerT_42820-T1
Valid prediction for GeneMark_model.73971_t
Valid prediction for pasa_asmbl_19721.p1
Couldn't classify 141868, 141967
Sorry, prediction pasa_asmbl_19719.p1 fails validation.
(GAT)	 AT	141868-141967	GT	AGG
(ATT)	 AG	144031-144179	GT	TGG
(GAC)	 AG	145662-145829	GC	GAG
-recovered pasa_asmbl_19719.p1, terminal, 145662, 145829
-recovered pasa_asmbl_19719.p1, internal, 144031, 144179
-recovered pasa_asmbl_19719.p1, internal, 145662, 145829
Valid prediction for GeneMark_model.73976_t
Valid prediction for GeneMark_model.73994_t
Valid prediction for GeneMark_model.73995_t
Valid prediction for pasa_asmbl_19720.p1
Valid prediction for snap_scaffold_18-snap.416-T1
Couldn't classify 62038, 62292
Couldn't classify 62395, 62469
Sorry, prediction pasa_asmbl_19734.p1 fails validation.
(GCC)	 GC	62038-62292	GT	AGG
(CGC)	 AG	62395-62469	CC	CCC
Valid prediction for CodingQuarry_transcript_23636-T1
Valid prediction for GeneMark_model.73958_t
Valid prediction for GeneMark_model.73985_t
Valid prediction for GeneMark_model.73962_t
Valid prediction for pasa_asmbl_19723.p2
Valid prediction for snap_scaffold_18-snap.405-T1
Valid prediction for snap_scaffold_18-snap.393-T1
Valid prediction for Augustus_model.g28649.t1
Valid prediction for CodingQuarry_transcript_23639-T1
Valid prediction for snap_scaffold_18-snap.402-T1
Valid prediction for snap_scaffold_18-snap.428-T1
Valid prediction for snap_scaffold_18-snap.385-T1
Valid prediction for snap_scaffold_18-snap.394-T1
Valid prediction for snap_scaffold_18-snap.414-T1
Valid prediction for GeneMark_model.73974_t
Valid prediction for snap_scaffold_18-snap.406-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for pasa_asmbl_19687.p1
Valid prediction for HiQ_model.g28645.t1
Valid prediction for Augustus_model.g28641.t1
Valid prediction for GeneMark_model.73993_t
Valid prediction for Augustus_model.g28642.t1
Valid prediction for CodingQuarry_transcript_23632-T1
Valid prediction for GlimmerHMM_glimmerT_42825-T1
Valid prediction for snap_scaffold_18-snap.403-T1
Valid prediction for snap_scaffold_18-snap.399-T1
Valid prediction for CodingQuarry_transcript_23627-T1
Valid prediction for GeneMark_model.73961_t
Couldn't classify 29028, 29183
Couldn't classify 30931, 31321
Sorry, prediction pasa_asmbl_19742.p1 fails validation.
(CTG)	 CT	29028-29183	GT	AGG
(GAC)	 AG	29488-29612	GT	CAG
(GGA)	 AG	29879-30045	GT	CCG
(GAG)	 AG	30261-30355	GT	AGG
(CAA)	 AG	30496-30662	GT	CGG
(AGA)	 AG	30931-31321	AC	CCA
-recovered pasa_asmbl_19742.p1, internal, 29488, 29612
-recovered pasa_asmbl_19742.p1, internal, 29879, 30045
-recovered pasa_asmbl_19742.p1, internal, 30261, 30355
-recovered pasa_asmbl_19742.p1, internal, 30496, 30662
Valid prediction for GeneMark_model.73978_t
Valid prediction for snap_scaffold_18-snap.389-T1
Valid prediction for GeneMark_model.73959_t
Valid prediction for GeneMark_model.73972_t
Valid prediction for GeneMark_model.73991_t
Valid prediction for snap_scaffold_18-snap.384-T1
Valid prediction for GeneMark_model.73968_t
Valid prediction for snap_scaffold_18-snap.397-T1
Valid prediction for Augustus_model.g28638.t1
Couldn't classify 57025, 57036
Couldn't classify 61494, 61622
Sorry, prediction pasa_asmbl_19736.p1 fails validation.
(CCC)	 CC	57025-57036	GT	AGG
(GTG)	 AG	57195-57304	GT	TGG
(TAA)	 AG	57400-57649	GT	AGG
(GAT)	 AG	58710-58808	GT	TGG
(ACG)	 AG	61156-61335	GT	AGG
(CCC)	 AG	61494-61622	AC	GCA
-recovered pasa_asmbl_19736.p1, internal, 57195, 57304
-recovered pasa_asmbl_19736.p1, internal, 57400, 57649
-recovered pasa_asmbl_19736.p1, internal, 58710, 58808
-recovered pasa_asmbl_19736.p1, internal, 61156, 61335
Valid prediction for GlimmerHMM_glimmerT_42801-T1
Valid prediction for GeneMark_model.73987_t
Valid prediction for GlimmerHMM_glimmerT_42811-T1
Valid prediction for GeneMark_model.73964_t
Valid prediction for Augustus_model.g28646.t1
Valid prediction for CodingQuarry_transcript_23626-T1
Valid prediction for GlimmerHMM_glimmerT_42823-T1
Valid prediction for snap_scaffold_18-snap.408-T1
Valid prediction for GeneMark_model.73990_t
Valid prediction for Augustus_model.g28651.t1
Valid prediction for GeneMark_model.73979_t
Valid prediction for GlimmerHMM_glimmerT_42805-T1
Couldn't classify 62530, 62545
Couldn't classify 63160, 63498
Sorry, prediction pasa_asmbl_19733.p1 fails validation.
(GGC)	 AC	62530-62545	GT	AGG
(AGT)	 AG	62662-62888	GT	AGG
(AGT)	 AG	63004-63060	GT	AGG
(GCT)	 AG	63160-63498	CC	TGC
-recovered pasa_asmbl_19733.p1, internal, 62662, 62888
-recovered pasa_asmbl_19733.p1, internal, 63004, 63060
Valid prediction for Augustus_model.g28653.t1
Valid prediction for GlimmerHMM_glimmerT_42792-T1
Valid prediction for GlimmerHMM_glimmerT_42818-T1
Valid prediction for CodingQuarry_transcript_23628-T1
Valid prediction for Augustus_model.g28658.t1
Valid prediction for CodingQuarry_transcript_23635-T1
Valid prediction for snap_scaffold_18-snap.411-T1
Valid prediction for snap_scaffold_18-snap.388-T1
Valid prediction for snap_scaffold_18-snap.392-T1
Valid prediction for GlimmerHMM_glimmerT_42800-T1
Valid prediction for Augustus_model.g28656.t1
Valid prediction for Augustus_model.g28636.t1
Valid prediction for pasa_asmbl_19699.p1
Valid prediction for GlimmerHMM_glimmerT_42794-T1
Couldn't classify 5933, 6023
Sorry, prediction pasa_asmbl_19745.p1 fails validation.
(ATG)	 TG	4462-4622	GT	CAG
(GAT)	 AG	4964-5093	GT	AGG
(ACG)	 AG	5247-5374	GT	AAG
(GTT)	 AG	5933-6023	CT	TCC
-recovered pasa_asmbl_19745.p1, initial, 4462, 4622
-recovered pasa_asmbl_19745.p1, internal, 4964, 5093
-recovered pasa_asmbl_19745.p1, internal, 5247, 5374
Valid prediction for GlimmerHMM_glimmerT_42826-T1
Valid prediction for CodingQuarry_transcript_23624-T1
Couldn't classify 172221, 172374
Sorry, prediction pasa_asmbl_19713.p1 fails validation.
(GAG)	 CA	172221-172374	GT	AAG
(CAA)	 AG	172471-172614	GT	GGG
(CTC)	 AG	172749-172876	GT	GAG
-recovered pasa_asmbl_19713.p1, terminal, 172749, 172876
-recovered pasa_asmbl_19713.p1, internal, 172471, 172614
-recovered pasa_asmbl_19713.p1, internal, 172749, 172876
Valid prediction for snap_scaffold_18-snap.382-T1
Valid prediction for GlimmerHMM_glimmerT_42813-T1
Couldn't classify 63682, 63696
Couldn't classify 64474, 64818
Sorry, prediction pasa_asmbl_19732.p1 fails validation.
(CCC)	 CA	63682-63696	GT	AGG
(GTG)	 AG	63810-64069	GT	TGG
(GAC)	 AG	64186-64357	GT	CGG
(CCA)	 AG	64474-64818	CA	CCC
-recovered pasa_asmbl_19732.p1, internal, 63810, 64069
-recovered pasa_asmbl_19732.p1, internal, 64186, 64357
Valid prediction for GeneMark_model.73997_t
Valid prediction for GlimmerHMM_glimmerT_42817-T1
Couldn't classify 100370, 101299
Sorry, prediction pasa_asmbl_19726.p1 fails validation.
(ATG)	 AC	100184-100225	GT	AGG
(ATC)	 AG	100370-101299	CG	AGC
-recovered pasa_asmbl_19726.p1, initial, 100184, 100225
Valid prediction for snap_scaffold_18-snap.420-T1
Couldn't classify 202509, 202605
Sorry, prediction pasa_asmbl_19708.p1 fails validation.
(CTG)	 AT	202509-202605	GT	AGG
(GTC)	 AG	202708-203219	AC	AAA
-recovered pasa_asmbl_19708.p1, terminal, 202708, 203219
Valid prediction for GeneMark_model.73999_t
Valid prediction for CodingQuarry_transcript_23625-T1
Valid prediction for GeneMark_model.73969_t
Valid prediction for GeneMark_model.73967_t
Valid prediction for GeneMark_model.73957_t
Valid prediction for GlimmerHMM_glimmerT_42802-T1
Valid prediction for HiQ_model.g28634.t1
Valid prediction for GlimmerHMM_glimmerT_42793-T1
Valid prediction for GlimmerHMM_glimmerT_42795-T1
Valid prediction for HiQ_model.g28635.t1
Valid prediction for GlimmerHMM_glimmerT_42808-T1
Valid prediction for Augustus_model.g28647.t1
Valid prediction for GlimmerHMM_glimmerT_42815-T1
Valid prediction for snap_scaffold_18-snap.383-T1
Couldn't classify 149384, 149427
Sorry, prediction pasa_asmbl_19714.p1 fails validation.
(GCG)	 TA	149384-149427	GT	CAG
(TGG)	 AG	149821-149858	GT	AGG
(GTC)	 AG	150057-150178	GT	ATG
(ACA)	 AG	150485-150562	GT	GAG
(GGC)	 AG	150701-150811	GT	AGG
(GTA)	 AG	150990-151424	AG	AGA
-recovered pasa_asmbl_19714.p1, terminal, 150990, 151424
-recovered pasa_asmbl_19714.p1, internal, 149821, 149858
-recovered pasa_asmbl_19714.p1, internal, 150057, 150178
-recovered pasa_asmbl_19714.p1, internal, 150485, 150562
-recovered pasa_asmbl_19714.p1, internal, 150701, 150811
Valid prediction for GlimmerHMM_glimmerT_42828-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 64510, rend_intergenic: 64083  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143893, rend_intergenic: 142302  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148148, rend_intergenic: 144006  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153117, rend_intergenic: 149034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181369, rend_intergenic: 177481  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 202084, rend_intergenic: 189164  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208575, rend_intergenic: 202679  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236228, rend_intergenic: 219942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 251658
-exon list size: 779


building trellis

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29.1    
29.2    
29.3    
29.4    
29.6    
29.7    
29.8    
30.0    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.9    
31.0    
31.1    
31.2    
31.4    
31.5    
31.6    
31.8    
31.9    
32.0    
32.1    
32.3    
32.4    
32.5    
32.7    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.4    
34.6    
34.7    
34.8    
35.0    
35.1    
35.2    
35.3    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.4    
36.5    
36.6    
36.7    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.6    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.5    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.6    
39.7    
39.8    
39.9    
40.1    
40.2    
40.3    
40.5    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.4    
41.5    
41.6    
41.7    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.1    
43.3    
43.4    
43.5    
43.7    
43.8    
43.9    
44.0    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.8    
46.0    
46.1    
46.2    
46.4    
46.5    
46.6    
46.7    
46.9    
47.0    
47.1    
47.2    
47.4    
47.5    
47.6    
47.8    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.2    
52.4    
52.5    
52.6    
52.8    
52.9    
53.0    
53.1    
53.3    
53.4    
53.5    
53.6    
53.8    
53.9    
54.0    
54.2    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.3    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.7    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.3    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.2    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.7    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.5    
82.6    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.2    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.7    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.9    
94.0    
94.1    
94.2    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.1    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 40 predictions from path traversal
Error with prediction: snap lend_intergenic: 64510, rend_intergenic: 64083  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143893, rend_intergenic: 142302  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148148, rend_intergenic: 144006  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153117, rend_intergenic: 149034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181369, rend_intergenic: 177481  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 202084, rend_intergenic: 189164  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208575, rend_intergenic: 202679  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236228, rend_intergenic: 219942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 33 predictions persist after filtering for low support