-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_18/scaffold_18_1549489-1723927

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 7413, 7492
Sorry, prediction pasa_asmbl_20387.p1 fails validation.
(ATG)	 CC	6795-7035	GT	GGG
(GCG)	 AG	7413-7492	AC	TGA
-recovered pasa_asmbl_20387.p1, initial, 6795, 7035
Valid prediction for snap_scaffold_18-snap.341-T1
Valid prediction for Augustus_model.g28611.t1
Valid prediction for GlimmerHMM_glimmerT_42767-T1
Valid prediction for Augustus_model.g28605.t1
Valid prediction for snap_scaffold_18-snap.329-T1
Valid prediction for Augustus_model.g28595.t1
Valid prediction for GeneMark_model.73913_t
Valid prediction for snap_scaffold_18-snap.310-T1
Valid prediction for Augustus_model.g28596.t1
Valid prediction for GeneMark_model.73905_t
Valid prediction for snap_scaffold_18-snap.318-T1
Valid prediction for GeneMark_model.73920_t
Valid prediction for GeneMark_model.73906_t
Valid prediction for GlimmerHMM_glimmerT_42763-T1
Couldn't classify 127053, 127218
Sorry, prediction pasa_asmbl_20400.p1 fails validation.
(CCT)	 CG	127053-127218	GT	TGG
(CAG)	 AG	128227-128328	GT	TGG
(ATG)	 AG	128424-128486	GT	CCG
(CCA)	 AG	128724-128826	GT	GGG
(TCG)	 AG	129025-129186	GT	TGG
(CGA)	 AG	129309-129490	GT	CGG
(GGA)	 AG	129980-130074	GT	AGG
(TGC)	 AG	130176-130272	GT	AGG
(TGA)	 AG	130376-130479	GT	AGG
(GAG)	 AG	130774-130889	GT	AGG
(GCT)	 AG	130996-131248	GA	GAG
-recovered pasa_asmbl_20400.p1, initial, 128424, 128486
-recovered pasa_asmbl_20400.p1, terminal, 130996, 131248
-recovered pasa_asmbl_20400.p1, internal, 128227, 128328
-recovered pasa_asmbl_20400.p1, internal, 128424, 128486
-recovered pasa_asmbl_20400.p1, internal, 128724, 128826
-recovered pasa_asmbl_20400.p1, internal, 129025, 129186
-recovered pasa_asmbl_20400.p1, internal, 129309, 129490
-recovered pasa_asmbl_20400.p1, internal, 129980, 130074
-recovered pasa_asmbl_20400.p1, internal, 130176, 130272
-recovered pasa_asmbl_20400.p1, internal, 130376, 130479
-recovered pasa_asmbl_20400.p1, internal, 130774, 130889
Valid prediction for Augustus_model.g28606.t1
Valid prediction for HiQ_model.g28598.t1
Valid prediction for GeneMark_model.73923_t
Valid prediction for snap_scaffold_18-snap.323-T1
Valid prediction for snap_scaffold_18-snap.327-T1
Valid prediction for GlimmerHMM_glimmerT_42747-T1
Valid prediction for HiQ_model.g28597.t1
Valid prediction for snap_scaffold_18-snap.350-T1
Valid prediction for GeneMark_model.73898_t
Valid prediction for GeneMark_model.73893_t
Couldn't classify 71648, 71779
Sorry, prediction pasa_asmbl_20394.p2 fails validation.
(GGC)	 AC	71648-71779	GT	TGG
(GTG)	 AG	71869-72013	GT	CAG
(ATG)	 AG	72192-72403	CA	AAC
-recovered pasa_asmbl_20394.p2, terminal, 72192, 72403
-recovered pasa_asmbl_20394.p2, internal, 71869, 72013
Valid prediction for GeneMark_model.73914_t
Valid prediction for snap_scaffold_18-snap.346-T1
Valid prediction for snap_scaffold_18-snap.321-T1
Valid prediction for GlimmerHMM_glimmerT_42760-T1
Valid prediction for snap_scaffold_18-snap.332-T1
Couldn't classify 121504, 121652
Couldn't classify 122070, 122228
Couldn't classify 122422, 122569
Sorry, prediction pasa_asmbl_20398.p1 fails validation.
(TGG)	 TG	121504-121652	GT	CTG
(TTT)	 AG	122070-122228	AT	TCA
(CTA)	 AC	122422-122569	GC	AGG
(GTG)	 AG	122693-123039	GT	GAG
(GAT)	 AG	123129-123322	GT	TGG
(GAA)	 AG	123584-123690	GT	AGG
(GAG)	 AG	123777-123984	GT	AGG
(CTG)	 AG	124100-124656	AA	AGA
-recovered pasa_asmbl_20398.p1, terminal, 124100, 124656
-recovered pasa_asmbl_20398.p1, internal, 122693, 123039
-recovered pasa_asmbl_20398.p1, internal, 123129, 123322
-recovered pasa_asmbl_20398.p1, internal, 123584, 123690
-recovered pasa_asmbl_20398.p1, internal, 123777, 123984
Couldn't classify 54336, 54489
Sorry, prediction pasa_asmbl_20392.p1 fails validation.
(CTC)	 TG	54336-54489	GT	AGG
(GTC)	 AG	54614-54777	GT	AGG
(AGT)	 AG	54976-55095	GT	ATG
(CCC)	 AG	55192-55274	GT	AAG
(GAA)	 AG	55520-55613	GT	ATG
(GTG)	 AG	55684-55764	GT	ATG
(ATT)	 AG	55870-56011	GT	AGG
(TGA)	 AG	56417-56547	TG	AAT
-recovered pasa_asmbl_20392.p1, terminal, 56417, 56547
-recovered pasa_asmbl_20392.p1, internal, 54614, 54777
-recovered pasa_asmbl_20392.p1, internal, 54976, 55095
-recovered pasa_asmbl_20392.p1, internal, 55192, 55274
-recovered pasa_asmbl_20392.p1, internal, 55520, 55613
-recovered pasa_asmbl_20392.p1, internal, 55684, 55764
-recovered pasa_asmbl_20392.p1, internal, 55870, 56011
Valid prediction for snap_scaffold_18-snap.313-T1
Valid prediction for GeneMark_model.73912_t
Valid prediction for GeneMark_model.73907_t
Valid prediction for GeneMark_model.73903_t
Valid prediction for CodingQuarry_transcript_23615-T1
Valid prediction for Augustus_model.g28610.t1
Valid prediction for GlimmerHMM_glimmerT_42765-T1
Valid prediction for snap_scaffold_18-snap.319-T1
Valid prediction for pasa_asmbl_20393.p1
Valid prediction for GeneMark_model.73909_t
Valid prediction for snap_scaffold_18-snap.343-T1
Valid prediction for GlimmerHMM_glimmerT_42769-T1
Valid prediction for HiQ_model.g28593.t1
Valid prediction for GeneMark_model.73916_t
Valid prediction for HiQ_model.g28607.t1
Valid prediction for snap_scaffold_18-snap.347-T1
Valid prediction for snap_scaffold_18-snap.335-T1
Valid prediction for GeneMark_model.73918_t
Couldn't classify 7571, 7701
Sorry, prediction pasa_asmbl_20388.p1 fails validation.
(CAC)	 GC	7571-7701	GT	AGG
(GTT)	 AG	8268-9087	GC	GAG
-recovered pasa_asmbl_20388.p1, terminal, 8268, 9087
-recovered pasa_asmbl_20388.p1, internal, 8268, 9087
Valid prediction for snap_scaffold_18-snap.344-T1
Valid prediction for snap_scaffold_18-snap.336-T1
Valid prediction for GlimmerHMM_glimmerT_42756-T1
Valid prediction for GeneMark_model.73888_t
Valid prediction for GeneMark_model.73886_t
Valid prediction for GlimmerHMM_glimmerT_42751-T1
Valid prediction for GlimmerHMM_glimmerT_42753-T1
Valid prediction for GeneMark_model.73900_t
Valid prediction for snap_scaffold_18-snap.333-T1
Valid prediction for snap_scaffold_18-snap.312-T1
Valid prediction for snap_scaffold_18-snap.337-T1
Valid prediction for snap_scaffold_18-snap.315-T1
Valid prediction for snap_scaffold_18-snap.316-T1
Valid prediction for GlimmerHMM_glimmerT_42764-T1
Valid prediction for GeneMark_model.73901_t
Valid prediction for GeneMark_model.73895_t
Valid prediction for snap_scaffold_18-snap.320-T1
Valid prediction for Augustus_model.g28601.t1
Valid prediction for snap_scaffold_18-snap.340-T1
Valid prediction for snap_scaffold_18-snap.325-T1
Valid prediction for GlimmerHMM_glimmerT_42755-T1
Valid prediction for CodingQuarry_transcript_23616-T1
Couldn't classify 48631, 48838
Couldn't classify 49170, 49344
Sorry, prediction pasa_asmbl_21117.p1 fails validation.
(TCG)	 GG	48631-48838	GT	AGG
(TGT)	 AG	48942-49041	GT	AGG
(GCT)	 AG	49170-49344	CT	CCC
-recovered pasa_asmbl_21117.p1, internal, 48942, 49041
Valid prediction for GeneMark_model.73896_t
Couldn't classify 53289, 53290
Couldn't classify 54299, 54473
Sorry, prediction pasa_asmbl_20390.p1 fails validation.
(ATG)	 TA	53289-53290	GT	ATG
(GTC)	 AG	53759-53967	GT	AGG
(TGT)	 AG	54071-54170	GT	AGG
(GCT)	 AG	54299-54473	CT	CCC
-recovered pasa_asmbl_20390.p1, internal, 53759, 53967
-recovered pasa_asmbl_20390.p1, internal, 54071, 54170
Valid prediction for GeneMark_model.73891_t
Valid prediction for GeneMark_model.73894_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_42749-T1
Valid prediction for GlimmerHMM_glimmerT_42748-T1
Valid prediction for GlimmerHMM_glimmerT_42757-T1
Valid prediction for pasa_asmbl_19673.p1
Valid prediction for GlimmerHMM_glimmerT_42754-T1
Valid prediction for GeneMark_model.73887_t
Valid prediction for GlimmerHMM_glimmerT_42750-T1
Valid prediction for GeneMark_model.73924_t
Valid prediction for GeneMark_model.73915_t
Valid prediction for snap_scaffold_18-snap.334-T1
Couldn't classify 38852, 38989
Sorry, prediction pasa_asmbl_19670.p1 fails validation.
(CTG)	 TG	38852-38989	GT	AGG
(GTG)	 AG	39392-39590	GT	CAG
(GTA)	 AG	39760-39868	GT	AGG
(GTG)	 AG	40008-40249	GT	AGG
(GTT)	 AG	40372-40496	GA	AAG
-recovered pasa_asmbl_19670.p1, terminal, 40372, 40496
-recovered pasa_asmbl_19670.p1, internal, 39392, 39590
-recovered pasa_asmbl_19670.p1, internal, 39760, 39868
-recovered pasa_asmbl_19670.p1, internal, 40008, 40249
Valid prediction for snap_scaffold_18-snap.317-T1
Valid prediction for snap_scaffold_18-snap.324-T1
Valid prediction for GlimmerHMM_glimmerT_42770-T1
Valid prediction for snap_scaffold_18-snap.345-T1
Valid prediction for GlimmerHMM_glimmerT_42761-T1
Valid prediction for GeneMark_model.73889_t
Valid prediction for snap_scaffold_18-snap.331-T1
Valid prediction for GeneMark_model.73911_t
Valid prediction for GeneMark_model.73919_t
Valid prediction for snap_scaffold_18-snap.339-T1
Valid prediction for Augustus_model.g28592.t1
Valid prediction for snap_scaffold_18-snap.348-T1
Valid prediction for GeneMark_model.73899_t
Valid prediction for GeneMark_model.73910_t
Valid prediction for snap_scaffold_18-snap.328-T1
Valid prediction for GeneMark_model.73897_t
Valid prediction for Augustus_model.g28599.t1
Valid prediction for CodingQuarry_transcript_23619-T1
Couldn't classify 67173, 67261
Couldn't classify 69606, 69618
Sorry, prediction pasa_asmbl_19669.p1 fails validation.
(ATT)	 GT	67173-67261	GT	TGG
(GTC)	 AG	67704-67860	GT	AGG
(ATA)	 AG	68190-68277	GT	AGG
(ATT)	 AG	68520-68570	GT	AGG
(CTG)	 AG	68655-68713	GT	GAG
(GAT)	 AG	68851-68922	GT	GGG
(GTG)	 AG	69041-69109	GT	TGG
(TTT)	 AG	69222-69305	GT	AGG
(GTC)	 AG	69433-69512	GT	AGG
(CTC)	 AG	69606-69618	AG	AGA
-recovered pasa_asmbl_19669.p1, internal, 67704, 67860
-recovered pasa_asmbl_19669.p1, internal, 68190, 68277
-recovered pasa_asmbl_19669.p1, internal, 68520, 68570
-recovered pasa_asmbl_19669.p1, internal, 68655, 68713
-recovered pasa_asmbl_19669.p1, internal, 68851, 68922
-recovered pasa_asmbl_19669.p1, internal, 69041, 69109
-recovered pasa_asmbl_19669.p1, internal, 69222, 69305
-recovered pasa_asmbl_19669.p1, internal, 69433, 69512
Valid prediction for Augustus_model.g28600.t1
Valid prediction for snap_scaffold_18-snap.338-T1
Sorry, intron length (8) is less than minimum required (10)
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_18-snap.349-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.73908_t
Valid prediction for GlimmerHMM_glimmerT_42759-T1
Valid prediction for GeneMark_model.73902_t
Valid prediction for GeneMark_model.73917_t
Valid prediction for GeneMark_model.73890_t
Valid prediction for snap_scaffold_18-snap.314-T1
Valid prediction for GlimmerHMM_glimmerT_42762-T1
Valid prediction for snap_scaffold_18-snap.311-T1
Couldn't classify 37388, 37714
Sorry, prediction pasa_asmbl_19672.p2 fails validation.
(ATG)	 TG	37388-37714	AC	TCA
Valid prediction for GlimmerHMM_glimmerT_42746-T1
Valid prediction for Augustus_model.g28604.t1
Couldn't classify 170856, 170991
Sorry, prediction pasa_asmbl_19663.p1 fails validation.
(CGC)	 AA	170856-170991	GT	AGG
(AGC)	 AG	171131-171226	GT	GGG
(ACC)	 AG	171403-171529	GT	AGG
(TCT)	 AG	171624-171792	GT	CTG
(GAC)	 AG	171939-172059	GT	AGG
(ACA)	 AG	172217-172317	AG	AGA
-recovered pasa_asmbl_19663.p1, terminal, 172217, 172317
-recovered pasa_asmbl_19663.p1, internal, 171131, 171226
-recovered pasa_asmbl_19663.p1, internal, 171403, 171529
-recovered pasa_asmbl_19663.p1, internal, 171624, 171792
-recovered pasa_asmbl_19663.p1, internal, 171939, 172059
Valid prediction for GeneMark_model.73922_t
Valid prediction for CodingQuarry_transcript_23618-T1
Valid prediction for Augustus_model.g28613.t1
Valid prediction for CodingQuarry_transcript_23617-T1
Valid prediction for GlimmerHMM_glimmerT_42768-T1
Valid prediction for snap_scaffold_18-snap.330-T1
Valid prediction for snap_scaffold_18-snap.342-T1
Valid prediction for Augustus_model.g28594.t1
Valid prediction for snap_scaffold_18-snap.322-T1
Valid prediction for GeneMark_model.73885_t
Valid prediction for GlimmerHMM_glimmerT_42766-T1
Valid prediction for HiQ_model.g28602.t1
Valid prediction for GeneMark_model.73921_t
Valid prediction for HiQ_model.g28608.t1
Valid prediction for snap_scaffold_18-snap.309-T1
Valid prediction for snap_scaffold_18-snap.326-T1
Couldn't classify 71515, 71572
Sorry, prediction pasa_asmbl_19668.p1 fails validation.
(CTG)	 AC	71515-71572	GT	TAG
(GCG)	 AG	71662-71759	GT	AGG
(GTG)	 AG	71864-71992	GT	AGG
(GAT)	 AG	72113-72261	GT	AGG
(GTG)	 AG	72361-72397	CA	AAC
-recovered pasa_asmbl_19668.p1, terminal, 72361, 72397
-recovered pasa_asmbl_19668.p1, internal, 71662, 71759
-recovered pasa_asmbl_19668.p1, internal, 71864, 71992
-recovered pasa_asmbl_19668.p1, internal, 72113, 72261
Couldn't classify 6725, 6806
Sorry, prediction pasa_asmbl_19676.p1 fails validation.
(TCA)	 AA	6725-6806	GT	TGG
(GGG)	 AG	6904-7000	GT	AGG
(GTC)	 AG	7088-7189	GT	AGG
(TTT)	 AG	7272-7398	GT	AGG
(GAG)	 AG	7542-7720	GT	AGG
(GTT)	 AG	7821-7983	GT	AGG
(GGA)	 AG	8104-8172	GG	AAG
add_exon() Sorry, pasa_asmbl_19676.p1 6904-7000-terminal-3 is invalid.
-recovered pasa_asmbl_19676.p1, terminal, 6904, 7000
-recovered pasa_asmbl_19676.p1, terminal, 8104, 8172
-recovered pasa_asmbl_19676.p1, internal, 6904, 7000
-recovered pasa_asmbl_19676.p1, internal, 7088, 7189
-recovered pasa_asmbl_19676.p1, internal, 7272, 7398
-recovered pasa_asmbl_19676.p1, internal, 7542, 7720
-recovered pasa_asmbl_19676.p1, internal, 7821, 7983
Valid prediction for HiQ_model.g28612.t1
Couldn't classify 74830, 74945
Sorry, prediction pasa_asmbl_19666.p1 fails validation.
(TCC)	 TG	74830-74945	GT	AGG
(GGT)	 AG	75333-75415	GT	TGG
(GAA)	 AG	75580-75667	GT	TGG
(GCA)	 AG	75819-75999	AC	GAA
-recovered pasa_asmbl_19666.p1, terminal, 75819, 75999
-recovered pasa_asmbl_19666.p1, internal, 75333, 75415
-recovered pasa_asmbl_19666.p1, internal, 75580, 75667
Valid prediction for GlimmerHMM_glimmerT_42752-T1
Valid prediction for GlimmerHMM_glimmerT_42758-T1
Valid prediction for Augustus_model.g28609.t1
Valid prediction for GeneMark_model.73892_t
Valid prediction for GeneMark_model.73904_t
Valid prediction for Augustus_model.g28603.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9087, rend_intergenic: 9000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14032, rend_intergenic: 9509  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18870, rend_intergenic: 14463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25433, rend_intergenic: 19292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39082, rend_intergenic: 37275  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62561, rend_intergenic: 58470  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69528, rend_intergenic: 63093  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71856, rend_intergenic: 69598  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73500, rend_intergenic: 72119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76232, rend_intergenic: 75293  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78353, rend_intergenic: 76461  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80972, rend_intergenic: 78372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86410, rend_intergenic: 82101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99583, rend_intergenic: 89752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114421, rend_intergenic: 103035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124656, rend_intergenic: 120504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129989, rend_intergenic: 127062  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137052, rend_intergenic: 133635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151283, rend_intergenic: 140530  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155599, rend_intergenic: 152351  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172656, rend_intergenic: 167723  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 174439
-exon list size: 649


building trellis

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21.4    
21.5    
21.7    
21.8    
22.0    
22.1    
22.3    
22.4    
22.6    
22.7    
22.9    
23.0    
23.2    
23.3    
23.5    
23.7    
23.8    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.2    
25.3    
25.5    
25.7    
25.8    
26.0    
26.1    
26.3    
26.4    
26.6    
26.7    
26.9    
27.0    
27.2    
27.3    
27.5    
27.6    
27.8    
28.0    
28.1    
28.3    
28.4    
28.6    
28.7    
28.9    
29.0    
29.2    
29.3    
29.5    
29.6    
29.8    
30.0    
30.1    
30.3    
30.4    
30.6    
30.7    
30.9    
31.0    
31.2    
31.3    
31.5    
31.6    
31.8    
32.0    
32.1    
32.3    
32.4    
32.6    
32.7    
32.9    
33.0    
33.2    
33.3    
33.5    
33.6    
33.8    
33.9    
34.1    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.2    
35.3    
35.5    
35.6    
35.8    
35.9    
36.1    
36.3    
36.4    
36.6    
36.7    
36.9    
37.0    
37.2    
37.3    
37.5    
37.6    
37.8    
37.9    
38.1    
38.2    
38.4    
38.6    
38.7    
38.9    
39.0    
39.2    
39.3    
39.5    
39.6    
39.8    
39.9    
40.1    
40.2    
40.4    
40.6    
40.7    
40.9    
41.0    
41.2    
41.3    
41.5    
41.6    
41.8    
41.9    
42.1    
42.2    
42.4    
42.5    
42.7    
42.9    
43.0    
43.2    
43.3    
43.5    
43.6    
43.8    
43.9    
44.1    
44.2    
44.4    
44.5    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
45.9    
46.1    
46.2    
46.4    
46.5    
46.7    
46.9    
47.0    
47.2    
47.3    
47.5    
47.6    
47.8    
47.9    
48.1    
48.2    
48.4    
48.5    
48.7    
48.8    
49.0    
49.2    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.8    
51.0    
51.2    
51.3    
51.5    
51.6    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.3    
53.5    
53.6    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.5    
55.6    
55.8    
55.9    
56.1    
56.2    
56.4    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.5    
57.6    
57.8    
57.9    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
59.0    
59.1    
59.3    
59.4    
59.6    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
61.0    
61.1    
61.3    
61.4    
61.6    
61.8    
61.9    
62.1    
62.2    
62.4    
62.5    
62.7    
62.8    
63.0    
63.1    
63.3    
63.4    
63.6    
63.7    
63.9    
64.1    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
67.0    
67.1    
67.3    
67.4    
67.6    
67.7    
67.9    
68.0    
68.2    
68.4    
68.5    
68.7    
68.8    
69.0    
69.1    
69.3    
69.4    
69.6    
69.7    
69.9    
70.0    
70.2    
70.4    
70.5    
70.7    
70.8    
71.0    
71.1    
71.3    
71.4    
71.6    
71.7    
71.9    
72.0    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.5    
74.7    
74.8    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.5    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.6    
77.7    
77.9    
78.0    
78.2    
78.3    
78.5    
78.6    
78.8    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.2    
80.3    
80.5    
80.6    
80.8    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.2    
84.3    
84.5    
84.6    
84.8    
84.9    
85.1    
85.3    
85.4    
85.6    
85.7    
85.9    
86.0    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.6    
91.7    
91.9    
92.0    
92.2    
92.3    
92.5    
92.6    
92.8    
92.9    
93.1    
93.2    
93.4    
93.5    
93.7    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.1    
95.2    
95.4    
95.5    
95.7    
95.9    
96.0    
96.2    
96.3    
96.5    
96.6    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.7    
97.8    
98.0    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 27 predictions from path traversal
Error with prediction: snap lend_intergenic: 9087, rend_intergenic: 9000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14032, rend_intergenic: 9509  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18870, rend_intergenic: 14463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25433, rend_intergenic: 19292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39082, rend_intergenic: 37275  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62561, rend_intergenic: 58470  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69528, rend_intergenic: 63093  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71856, rend_intergenic: 69598  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73500, rend_intergenic: 72119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76232, rend_intergenic: 75293  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78353, rend_intergenic: 76461  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80972, rend_intergenic: 78372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86410, rend_intergenic: 82101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99583, rend_intergenic: 89752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114421, rend_intergenic: 103035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124656, rend_intergenic: 120504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129989, rend_intergenic: 127062  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137052, rend_intergenic: 133635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151283, rend_intergenic: 140530  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155599, rend_intergenic: 152351  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172656, rend_intergenic: 167723  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support