-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1738

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1527, 1719
Sorry, prediction Augustus_model.g41807.t1 fails validation.
(TTG)	 AG	1527-1719	GT	GGG
-recovered Augustus_model.g41807.t1, internal, 1527, 1719
Couldn't classify 1527, 1719
Sorry, prediction snap_scaffold_1738-snap.1-T1 fails validation.
(TTG)	 AG	1527-1719	GT	GGG
-recovered snap_scaffold_1738-snap.1-T1, internal, 1527, 1719

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 286, 372
Couldn't classify 643, 747
Sorry, prediction GeneMark_model.109679_t fails validation.
(AGC)	 AG	286-372	GT	GAG
(GGT)	 AG	497-544	GT	AGG
(AAC)	 AG	643-747	GC	GAG
-recovered GeneMark_model.109679_t, internal, 286, 372
-recovered GeneMark_model.109679_t, internal, 497, 544
-recovered GeneMark_model.109679_t, internal, 643, 747

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2000
-exon list size: 8


building trellis

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-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support