-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1722

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 881, 987
Sorry, prediction GeneMark_model.109659_t fails validation.
(ATG)	 CG	643-758	GT	TCG
(AGA)	 AG	881-987	GT	GGG
-recovered GeneMark_model.109659_t, initial, 643, 758
-recovered GeneMark_model.109659_t, internal, 881, 987
Valid prediction for Augustus_model.g41800.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1233, 1292
Sorry, prediction snap_scaffold_1722-snap.1-T1 fails validation.
(GTC)	 AG	1233-1292	GT	TGG
(GGG)	 AG	1334-1473	GG	GAG
-recovered snap_scaffold_1722-snap.1-T1, terminal, 1334, 1473
-recovered snap_scaffold_1722-snap.1-T1, internal, 1233, 1292

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2001
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support