-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1703

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_62785-T1
Valid prediction for Augustus_model.g41792.t1
Valid prediction for snap_scaffold_1703-snap.1-T1
Couldn't classify 1343, 1690
Sorry, prediction GeneMark_model.109638_t fails validation.
(TCT)	 AG	1343-1690	GT	TGG
(GAC)	 AG	1713-1796	GT	AGG
(ATT)	 AG	1819-1927	CC	AGC
-recovered GeneMark_model.109638_t, terminal, 1819, 1927
-recovered GeneMark_model.109638_t, internal, 1343, 1690
-recovered GeneMark_model.109638_t, internal, 1713, 1796

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2029
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support