-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1701

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1326, 1523
Sorry, prediction GeneMark_model.109636_t fails validation.
(ATG)	 AC	1162-1172	GT	GCG
(AAG)	 AG	1202-1288	GT	AGG
(AGG)	 AG	1326-1523	GT	ATG
-recovered GeneMark_model.109636_t, initial, 1162, 1172
-recovered GeneMark_model.109636_t, internal, 1202, 1288
-recovered GeneMark_model.109636_t, internal, 1326, 1523
Couldn't classify 1158, 1523
Sorry, prediction snap_scaffold_1701-snap.1-T1 fails validation.
(ATG)	 TG	148-162	GT	GTG
(GAA)	 AG	1158-1523	GT	ATG
-recovered snap_scaffold_1701-snap.1-T1, initial, 148, 162
-recovered snap_scaffold_1701-snap.1-T1, internal, 1158, 1523

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2030
-exon list size: 8


building trellis

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-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support