-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_6869911-7101129 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.71305_t Valid prediction for snap_scaffold_17-snap.1370-T1 Valid prediction for GeneMark_model.71259_t Valid prediction for GlimmerHMM_glimmerT_41425-T1 Couldn't classify 150177, 151076 Sorry, prediction pasa_asmbl_18013.p1 fails validation. (ATA) AG 150177-151076 GA AAG Valid prediction for snap_scaffold_17-snap.1400-T1 Valid prediction for GlimmerHMM_glimmerT_41402-T1 Couldn't classify 152811, 154343 Sorry, prediction pasa_asmbl_18017.p1 fails validation. (AAT) TA 152811-154343 CT TGC Valid prediction for snap_scaffold_17-snap.1366-T1 Valid prediction for CodingQuarry_transcript_21978-T1 Couldn't classify 146206, 147519 Sorry, prediction pasa_asmbl_18010.p1 fails validation. (GAT) AA 146206-147519 TT AGT Valid prediction for GeneMark_model.71271_t Valid prediction for GlimmerHMM_glimmerT_41432-T1 Valid prediction for GeneMark_model.71279_t Valid prediction for snap_scaffold_17-snap.1376-T1 Valid prediction for snap_scaffold_17-snap.1361-T1 Valid prediction for GlimmerHMM_glimmerT_41416-T1 Valid prediction for GeneMark_model.71270_t Valid prediction for GlimmerHMM_glimmerT_41408-T1 Valid prediction for GeneMark_model.71298_t Valid prediction for GlimmerHMM_glimmerT_41410-T1 Valid prediction for snap_scaffold_17-snap.1386-T1 Valid prediction for snap_scaffold_17-snap.1362-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for snap_scaffold_17-snap.1394-T1 Valid prediction for HiQ_model.g27759.t1 Valid prediction for GeneMark_model.71277_t Valid prediction for GlimmerHMM_glimmerT_41403-T1 Valid prediction for GeneMark_model.71297_t Valid prediction for snap_scaffold_17-snap.1368-T1 Valid prediction for pasa_asmbl_18023.p1 Valid prediction for Augustus_model.g27750.t1 Valid prediction for GeneMark_model.71289_t Valid prediction for GlimmerHMM_glimmerT_41412-T1 Valid prediction for snap_scaffold_17-snap.1372-T1 Couldn't classify 181818, 182494 Couldn't classify 182586, 182701 Sorry, prediction CodingQuarry_transcript_21974-T1 fails validation. (ATG) TC 179598-180021 GT TGG (GTC) AG 180300-180646 GT AGG (TTG) AG 181148-181447 GT AGG (GTA) AG 181537-181712 GT AGG (GTA) AG 181818-182494 CT ACC (CAC) AC 182586-182701 AG GAA -recovered CodingQuarry_transcript_21974-T1, initial, 179598, 180021 -recovered CodingQuarry_transcript_21974-T1, internal, 180300, 180646 -recovered CodingQuarry_transcript_21974-T1, internal, 181148, 181447 -recovered CodingQuarry_transcript_21974-T1, internal, 181537, 181712 Valid prediction for snap_scaffold_17-snap.1373-T1 Valid prediction for snap_scaffold_17-snap.1383-T1 Valid prediction for GeneMark_model.71267_t Valid prediction for GeneMark_model.71291_t Valid prediction for GlimmerHMM_glimmerT_41433-T1 Valid prediction for Augustus_model.g27749.t1 Valid prediction for GeneMark_model.71273_t Valid prediction for GeneMark_model.71290_t Valid prediction for snap_scaffold_17-snap.1365-T1 Valid prediction for pasa_asmbl_18008.p1 Valid prediction for GlimmerHMM_glimmerT_41419-T1 Couldn't classify 147667, 148641 Sorry, prediction pasa_asmbl_18011.p1 fails validation. (AGA) CA 147667-148641 AT AGA Valid prediction for GeneMark_model.71303_t Valid prediction for pasa_asmbl_18019.p1 Valid prediction for CodingQuarry_transcript_21973-T1 Valid prediction for GeneMark_model.71300_t Valid prediction for snap_scaffold_17-snap.1393-T1 Valid prediction for GlimmerHMM_glimmerT_41418-T1 Valid prediction for HiQ_model.g27754.t1 Valid prediction for GeneMark_model.71293_t Couldn't classify 145258, 146163 Sorry, prediction pasa_asmbl_18009.p1 fails validation. (ATG) CC 145258-146163 GA GGG Valid prediction for snap_scaffold_17-snap.1363-T1 Valid prediction for GlimmerHMM_glimmerT_41399-T1 Valid prediction for GeneMark_model.71275_t Valid prediction for GlimmerHMM_glimmerT_41424-T1 Couldn't classify 148882, 149328 Couldn't classify 149547, 149801 Sorry, prediction pasa_asmbl_18012.p1 fails validation. (CGA) AT 148882-149328 GT AGG (GAT) AG 149547-149801 AT CCA Valid prediction for GlimmerHMM_glimmerT_41427-T1 Valid prediction for snap_scaffold_17-snap.1364-T1 Valid prediction for GeneMark_model.71263_t Valid prediction for GeneMark_model.71264_t Valid prediction for snap_scaffold_17-snap.1401-T1 Valid prediction for CodingQuarry_transcript_21979-T1 Valid prediction for Augustus_model.g27745.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g27743.t1 Valid prediction for pasa_asmbl_19075.p1 Valid prediction for GlimmerHMM_glimmerT_41414-T1 Valid prediction for GlimmerHMM_glimmerT_41429-T1 Valid prediction for snap_scaffold_17-snap.1378-T1 Valid prediction for snap_scaffold_17-snap.1384-T1 Valid prediction for GeneMark_model.71262_t Couldn't classify 10306, 10357 Couldn't classify 11227, 11303 Sorry, prediction pasa_asmbl_19079.p1 fails validation. (AAG) GG 10306-10357 GT CAG (TCT) AG 10452-10574 GT TGG (AGT) AG 10770-10860 GT AGG (ACG) AG 10991-11079 GT AGG (GAC) AG 11227-11303 CA GGC -recovered pasa_asmbl_19079.p1, internal, 10452, 10574 -recovered pasa_asmbl_19079.p1, internal, 10770, 10860 -recovered pasa_asmbl_19079.p1, internal, 10991, 11079 Valid prediction for GeneMark_model.71296_t Valid prediction for GlimmerHMM_glimmerT_41423-T1 Valid prediction for GlimmerHMM_glimmerT_41426-T1 Couldn't classify 136790, 136942 Sorry, prediction pasa_asmbl_19051.p1 fails validation. (TGC) GA 136790-136942 GT AGG (ATC) AG 137384-137498 GT TGG (GGA) AG 137737-137877 GT AGG (TGG) AG 138076-138265 GT AGG (GCT) AG 138535-138669 GT AGG (GGA) AG 138783-139209 GA GAG -recovered pasa_asmbl_19051.p1, terminal, 138783, 139209 -recovered pasa_asmbl_19051.p1, internal, 137384, 137498 -recovered pasa_asmbl_19051.p1, internal, 137737, 137877 -recovered pasa_asmbl_19051.p1, internal, 138076, 138265 -recovered pasa_asmbl_19051.p1, internal, 138535, 138669 Valid prediction for Augustus_model.g27738.t1 Valid prediction for GlimmerHMM_glimmerT_41404-T1 Valid prediction for HiQ_model.g27752.t1 Valid prediction for CodingQuarry_transcript_21980-T1 Couldn't classify 132463, 133062 Sorry, prediction pasa_asmbl_19052.p1 fails validation. (ATG) AG 132463-133062 CT TGC Valid prediction for GlimmerHMM_glimmerT_41407-T1 Valid prediction for GeneMark_model.71302_t Valid prediction for CodingQuarry_transcript_21971-T1 Valid prediction for snap_scaffold_17-snap.1390-T1 Valid prediction for GeneMark_model.71292_t Valid prediction for Augustus_model.g27747.t1 Valid prediction for pasa_asmbl_19069.p1 Valid prediction for snap_scaffold_17-snap.1374-T1 Couldn't classify 212191, 212247 Couldn't classify 214062, 214085 Sorry, prediction pasa_asmbl_19045.p1 fails validation. (ATT) AG 212191-212247 GT AGG (GTG) AG 212548-212675 GT AGG (GCT) AG 212983-213076 GT CTG (GAC) AG 213301-213455 GT AGG (AGC) AG 213663-213966 GT AGG (GAC) AG 214062-214085 GG GGG -recovered pasa_asmbl_19045.p1, internal, 212191, 212247 -recovered pasa_asmbl_19045.p1, internal, 212548, 212675 -recovered pasa_asmbl_19045.p1, internal, 212983, 213076 -recovered pasa_asmbl_19045.p1, internal, 213301, 213455 -recovered pasa_asmbl_19045.p1, internal, 213663, 213966 Valid prediction for pasa_asmbl_19064.p1 Valid prediction for snap_scaffold_17-snap.1385-T1 Valid prediction for snap_scaffold_17-snap.1375-T1 Couldn't classify 70006, 70119 Couldn't classify 72412, 72564 Sorry, prediction pasa_asmbl_19062.p1 fails validation. (CTT) CT 70006-70119 GT CGG (GTA) AG 70864-70895 GT GGG (ACA) AG 71001-71066 GT GCG (GCC) AG 71409-71456 GT TGG (GTT) AG 71574-71644 GT CAG (TTA) AG 71783-71856 GT AGG (GGT) AG 72011-72112 GT AGG (GCG) AG 72412-72564 CT GAC -recovered pasa_asmbl_19062.p1, internal, 70864, 70895 -recovered pasa_asmbl_19062.p1, internal, 71001, 71066 -recovered pasa_asmbl_19062.p1, internal, 71409, 71456 -recovered pasa_asmbl_19062.p1, internal, 71574, 71644 -recovered pasa_asmbl_19062.p1, internal, 71783, 71856 -recovered pasa_asmbl_19062.p1, internal, 72011, 72112 Valid prediction for HiQ_model.g27748.t1 Couldn't classify 115802, 115847 Sorry, prediction pasa_asmbl_19528.p1 fails validation. (TTC) AC 115802-115847 GT TGG (AAG) AG 116039-116162 GT TGG (TTC) AG 116272-116515 CC GAC -recovered pasa_asmbl_19528.p1, terminal, 116272, 116515 -recovered pasa_asmbl_19528.p1, internal, 116039, 116162 Valid prediction for GlimmerHMM_glimmerT_41434-T1 Valid prediction for GeneMark_model.71272_t Valid prediction for snap_scaffold_17-snap.1369-T1 Valid prediction for Augustus_model.g27741.t1 Valid prediction for snap_scaffold_17-snap.1379-T1 Valid prediction for GlimmerHMM_glimmerT_41417-T1 Valid prediction for snap_scaffold_17-snap.1381-T1 Valid prediction for GeneMark_model.71268_t Valid prediction for HiQ_model.g27757.t1 Valid prediction for HiQ_model.g27744.t1 Valid prediction for GlimmerHMM_glimmerT_41421-T1 Valid prediction for snap_scaffold_17-snap.1371-T1 Couldn't classify 7581, 7668 Couldn't classify 9887, 10041 Sorry, prediction pasa_asmbl_19081.p1 fails validation. (CAG) TC 7581-7668 GT AGG (AGA) AG 8020-8152 GT AAG (TGG) AG 8525-8673 GT GGG (AGT) AG 8985-9136 GT GGG (GAT) AG 9501-9639 GT TGG (ATG) AG 9887-10041 CA AGC -recovered pasa_asmbl_19081.p1, internal, 8020, 8152 -recovered pasa_asmbl_19081.p1, internal, 8525, 8673 -recovered pasa_asmbl_19081.p1, internal, 8985, 9136 -recovered pasa_asmbl_19081.p1, internal, 9501, 9639 Valid prediction for GeneMark_model.71286_t Valid prediction for GlimmerHMM_glimmerT_41405-T1 Valid prediction for snap_scaffold_17-snap.1398-T1 Valid prediction for GeneMark_model.71288_t Couldn't classify 226224, 227690 Sorry, prediction pasa_asmbl_19041.p1 fails validation. (AAC) TG 226224-227690 GT GGG Valid prediction for CodingQuarry_transcript_21976-T1 Valid prediction for snap_scaffold_17-snap.1399-T1 Valid prediction for snap_scaffold_17-snap.1403-T1 Valid prediction for GeneMark_model.71285_t Valid prediction for snap_scaffold_17-snap.1382-T1 Valid prediction for GlimmerHMM_glimmerT_41422-T1 Valid prediction for CodingQuarry_transcript_21977-T1 Valid prediction for GeneMark_model.71283_t Valid prediction for snap_scaffold_17-snap.1389-T1 Valid prediction for pasa_asmbl_19050.p2 Valid prediction for snap_scaffold_17-snap.1397-T1 Valid prediction for GeneMark_model.71276_t Valid prediction for pasa_asmbl_19077.p1 Valid prediction for CodingQuarry_transcript_21972-T1 Valid prediction for CodingQuarry_transcript_21968-T1 Valid prediction for GlimmerHMM_glimmerT_41400-T1 Valid prediction for HiQ_model.g27758.t1 Valid prediction for snap_scaffold_17-snap.1391-T1 Valid prediction for GlimmerHMM_glimmerT_41401-T1 Valid prediction for snap_scaffold_17-snap.1380-T1 Valid prediction for GeneMark_model.71260_t Valid prediction for snap_scaffold_17-snap.1402-T1 Valid prediction for Augustus_model.g27755.t1 Valid prediction for GeneMark_model.71301_t Valid prediction for Augustus_model.g27751.t1 Valid prediction for CodingQuarry_transcript_21967-T1 Valid prediction for snap_scaffold_17-snap.1367-T1 Valid prediction for GeneMark_model.71258_t Valid prediction for pasa_asmbl_19053.p1 Valid prediction for GeneMark_model.71280_t Valid prediction for snap_scaffold_17-snap.1388-T1 Valid prediction for GlimmerHMM_glimmerT_41406-T1 Valid prediction for GeneMark_model.71274_t Valid prediction for CodingQuarry_transcript_21969-T1 Valid prediction for GlimmerHMM_glimmerT_41420-T1 Valid prediction for Augustus_model.g27740.t1 Valid prediction for CodingQuarry_transcript_21975-T1 Valid prediction for GeneMark_model.71266_t Valid prediction for snap_scaffold_17-snap.1395-T1 Valid prediction for snap_scaffold_17-snap.1360-T1 Valid prediction for GeneMark_model.71281_t Valid prediction for GlimmerHMM_glimmerT_41431-T1 Valid prediction for HiQ_model.g27742.t1 Valid prediction for pasa_asmbl_19058.p1 Valid prediction for CodingQuarry_transcript_21970-T1 Valid prediction for GeneMark_model.71299_t Valid prediction for snap_scaffold_17-snap.1377-T1 Couldn't classify 45414, 45564 Sorry, prediction pasa_asmbl_19067.p1 fails validation. (GAA) AG 45414-45564 GT GGG (CCC) AG 45882-45988 GT AGG (GTG) AG 46223-46354 GT TGG (GTC) AG 46537-46647 GT AGG (TAT) AG 46930-46959 CG AAC -recovered pasa_asmbl_19067.p1, terminal, 46930, 46959 -recovered pasa_asmbl_19067.p1, internal, 45414, 45564 -recovered pasa_asmbl_19067.p1, internal, 45882, 45988 -recovered pasa_asmbl_19067.p1, internal, 46223, 46354 -recovered pasa_asmbl_19067.p1, internal, 46537, 46647 Valid prediction for GeneMark_model.71265_t Valid prediction for GeneMark_model.71295_t Valid prediction for GeneMark_model.71278_t Valid prediction for GeneMark_model.71294_t Valid prediction for GlimmerHMM_glimmerT_41437-T1 Valid prediction for pasa_asmbl_19073.p1 Valid prediction for Augustus_model.g27746.t1 Valid prediction for HiQ_model.g27760.t1 Valid prediction for GlimmerHMM_glimmerT_41430-T1 Couldn't classify 228150, 230810 Sorry, prediction pasa_asmbl_19040.p1 fails validation. (ATG) GA 228150-230810 TT GCT Valid prediction for GeneMark_model.71306_t Valid prediction for HiQ_model.g27756.t1 Valid prediction for GlimmerHMM_glimmerT_41415-T1 Valid prediction for GlimmerHMM_glimmerT_41413-T1 Valid prediction for GeneMark_model.71307_t Valid prediction for Augustus_model.g27761.t1 Valid prediction for GeneMark_model.71284_t Valid prediction for snap_scaffold_17-snap.1396-T1 Valid prediction for GlimmerHMM_glimmerT_41428-T1 Valid prediction for GlimmerHMM_glimmerT_41411-T1 Valid prediction for GeneMark_model.71269_t Valid prediction for GlimmerHMM_glimmerT_41436-T1 Valid prediction for Augustus_model.g27739.t1 Valid prediction for snap_scaffold_17-snap.1387-T1 Valid prediction for snap_scaffold_17-snap.1392-T1 Valid prediction for GlimmerHMM_glimmerT_41409-T1 Couldn't classify 55549, 55707 Sorry, prediction pasa_asmbl_19066.p1 fails validation. (AGG) GC 55549-55707 GT AGG (CTG) AG 56775-56831 GT TGG (GAA) AG 57240-57352 GT AGG (ACC) AG 57503-58071 GT TGG (GGA) AG 58268-58575 GT AGG (GTG) AG 58705-58819 GT AGG (TTC) AG 58946-59098 GT CTG (CGA) AG 59178-59275 GT AGG (TGC) AG 59482-59662 GT AGG (GAC) AG 59841-59970 GT AAG (GAT) AG 60057-60196 GT AAG (AAA) AG 60314-60375 GT AGG -recovered pasa_asmbl_19066.p1, terminal, 60314, 60375 -recovered pasa_asmbl_19066.p1, internal, 56775, 56831 -recovered pasa_asmbl_19066.p1, internal, 57240, 57352 -recovered pasa_asmbl_19066.p1, internal, 57503, 58071 -recovered pasa_asmbl_19066.p1, internal, 58268, 58575 -recovered pasa_asmbl_19066.p1, internal, 58705, 58819 -recovered pasa_asmbl_19066.p1, internal, 58946, 59098 -recovered pasa_asmbl_19066.p1, internal, 59178, 59275 -recovered pasa_asmbl_19066.p1, internal, 59482, 59662 -recovered pasa_asmbl_19066.p1, internal, 59841, 59970 -recovered pasa_asmbl_19066.p1, internal, 60057, 60196 -recovered pasa_asmbl_19066.p1, internal, 60314, 60375 Valid prediction for HiQ_model.g27753.t1 Valid prediction for GeneMark_model.71304_t Couldn't classify 214059, 214190 Couldn't classify 215426, 215491 Sorry, prediction pasa_asmbl_19044.p1 fails validation. (CAG) TC 214059-214190 GT AGG (ACA) AG 214289-214366 GT TGG (GAA) AG 214764-214925 GT CTG (GAA) AG 215089-215193 GT AGG (GCA) AG 215426-215491 CA AGC -recovered pasa_asmbl_19044.p1, internal, 214289, 214366 -recovered pasa_asmbl_19044.p1, internal, 214764, 214925 -recovered pasa_asmbl_19044.p1, internal, 215089, 215193 Valid prediction for GlimmerHMM_glimmerT_41435-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 38329, rend_intergenic: 7566 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47704, rend_intergenic: 43495 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52011, rend_intergenic: 48524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62327, rend_intergenic: 56133 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 70330, rend_intergenic: 63534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 76033, rend_intergenic: 71791 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 98757, rend_intergenic: 94312 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103391, rend_intergenic: 99187 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156296, rend_intergenic: 145258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 231219 -exon list size: 714 building trellis 0.1 0.3 0.4 0.6 0.7 0.8 1.0 1.1 1.3 1.4 1.5 1.7 1.8 2.0 2.1 2.2 2.4 2.5 2.7 2.8 2.9 3.1 3.2 3.4 3.5 3.6 3.8 3.9 4.1 4.2 4.3 4.5 4.6 4.7 4.9 5.0 5.2 5.3 5.4 5.6 5.7 5.9 6.0 6.1 6.3 6.4 6.6 6.7 6.8 7.0 7.1 7.3 7.4 7.5 7.7 7.8 8.0 8.1 8.2 8.4 8.5 8.7 8.8 8.9 9.1 9.2 9.4 9.5 9.6 9.8 9.9 10.1 10.2 10.3 10.5 10.6 10.8 10.9 11.0 11.2 11.3 11.5 11.6 11.7 11.9 12.0 12.2 12.3 12.4 12.6 12.7 12.8 13.0 13.1 13.3 13.4 13.5 13.7 13.8 14.0 14.1 14.2 14.4 14.5 14.7 14.8 14.9 15.1 15.2 15.4 15.5 15.6 15.8 15.9 16.1 16.2 16.3 16.5 16.6 16.8 16.9 17.0 17.2 17.3 17.5 17.6 17.7 17.9 18.0 18.2 18.3 18.4 18.6 18.7 18.9 19.0 19.1 19.3 19.4 19.6 19.7 19.8 20.0 20.1 20.3 20.4 20.5 20.7 20.8 20.9 21.1 21.2 21.4 21.5 21.6 21.8 21.9 22.1 22.2 22.3 22.5 22.6 22.8 22.9 23.0 23.2 23.3 23.5 23.6 23.7 23.9 24.0 24.2 24.3 24.4 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.6 25.7 25.8 26.0 26.1 26.3 26.4 26.5 26.7 26.8 27.0 27.1 27.2 27.4 27.5 27.7 27.8 27.9 28.1 28.2 28.4 28.5 28.6 28.8 28.9 29.1 29.2 29.3 29.5 29.6 29.7 29.9 30.0 30.2 30.3 30.4 30.6 30.7 30.9 31.0 31.1 31.3 31.4 31.6 31.7 31.8 32.0 32.1 32.3 32.4 32.5 32.7 32.8 33.0 33.1 33.2 33.4 33.5 33.7 33.8 33.9 34.1 34.2 34.4 34.5 34.6 34.8 34.9 35.1 35.2 35.3 35.5 35.6 35.8 35.9 36.0 36.2 36.3 36.5 36.6 36.7 36.9 37.0 37.2 37.3 37.4 37.6 37.7 37.8 38.0 38.1 38.3 38.4 38.5 38.7 38.8 39.0 39.1 39.2 39.4 39.5 39.7 39.8 39.9 40.1 40.2 40.4 40.5 40.6 40.8 40.9 41.1 41.2 41.3 41.5 41.6 41.8 41.9 42.0 42.2 42.3 42.5 42.6 42.7 42.9 43.0 43.2 43.3 43.4 43.6 43.7 43.9 44.0 44.1 44.3 44.4 44.6 44.7 44.8 45.0 45.1 45.3 45.4 45.5 45.7 45.8 45.9 46.1 46.2 46.4 46.5 46.6 46.8 46.9 47.1 47.2 47.3 47.5 47.6 47.8 47.9 48.0 48.2 48.3 48.5 48.6 48.7 48.9 49.0 49.2 49.3 49.4 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.6 50.7 50.8 51.0 51.1 51.3 51.4 51.5 51.7 51.8 52.0 52.1 52.2 52.4 52.5 52.7 52.8 52.9 53.1 53.2 53.4 53.5 53.6 53.8 53.9 54.1 54.2 54.3 54.5 54.6 54.7 54.9 55.0 55.2 55.3 55.4 55.6 55.7 55.9 56.0 56.1 56.3 56.4 56.6 56.7 56.8 57.0 57.1 57.3 57.4 57.5 57.7 57.8 58.0 58.1 58.2 58.4 58.5 58.7 58.8 58.9 59.1 59.2 59.4 59.5 59.6 59.8 59.9 60.1 60.2 60.3 60.5 60.6 60.8 60.9 61.0 61.2 61.3 61.5 61.6 61.7 61.9 62.0 62.2 62.3 62.4 62.6 62.7 62.8 63.0 63.1 63.3 63.4 63.5 63.7 63.8 64.0 64.1 64.2 64.4 64.5 64.7 64.8 64.9 65.1 65.2 65.4 65.5 65.6 65.8 65.9 66.1 66.2 66.3 66.5 66.6 66.8 66.9 67.0 67.2 67.3 67.5 67.6 67.7 67.9 68.0 68.2 68.3 68.4 68.6 68.7 68.9 69.0 69.1 69.3 69.4 69.6 69.7 69.8 70.0 70.1 70.3 70.4 70.5 70.7 70.8 70.9 71.1 71.2 71.4 71.5 71.6 71.8 71.9 72.1 72.2 72.3 72.5 72.6 72.8 72.9 73.0 73.2 73.3 73.5 73.6 73.7 73.9 74.0 74.2 74.3 74.4 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.6 75.7 75.8 76.0 76.1 76.3 76.4 76.5 76.7 76.8 77.0 77.1 77.2 77.4 77.5 77.7 77.8 77.9 78.1 78.2 78.4 78.5 78.6 78.8 78.9 79.1 79.2 79.3 79.5 79.6 79.7 79.9 80.0 80.2 80.3 80.4 80.6 80.7 80.9 81.0 81.1 81.3 81.4 81.6 81.7 81.8 82.0 82.1 82.3 82.4 82.5 82.7 82.8 83.0 83.1 83.2 83.4 83.5 83.7 83.8 83.9 84.1 84.2 84.4 84.5 84.6 84.8 84.9 85.1 85.2 85.3 85.5 85.6 85.8 85.9 86.0 86.2 86.3 86.5 86.6 86.7 86.9 87.0 87.2 87.3 87.4 87.6 87.7 87.8 88.0 88.1 88.3 88.4 88.5 88.7 88.8 89.0 89.1 89.2 89.4 89.5 89.7 89.8 89.9 90.1 90.2 90.4 90.5 90.6 90.8 90.9 91.1 91.2 91.3 91.5 91.6 91.8 91.9 92.0 92.2 92.3 92.5 92.6 92.7 92.9 93.0 93.2 93.3 93.4 93.6 93.7 93.9 94.0 94.1 94.3 94.4 94.6 94.7 94.8 95.0 95.1 95.3 95.4 95.5 95.7 95.8 95.9 96.1 96.2 96.4 96.5 96.6 96.8 96.9 97.1 97.2 97.3 97.5 97.6 97.8 97.9 98.0 98.2 98.3 98.5 98.6 98.7 98.9 99.0 99.2 99.3 99.4 99.6 99.7 99.9 -found 36 predictions from path traversal Error with prediction: snap lend_intergenic: 38329, rend_intergenic: 7566 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47704, rend_intergenic: 43495 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52011, rend_intergenic: 48524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62327, rend_intergenic: 56133 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 70330, rend_intergenic: 63534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 76033, rend_intergenic: 71791 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 98757, rend_intergenic: 94312 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103391, rend_intergenic: 99187 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156296, rend_intergenic: 145258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 25 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 15416 -exon list size: 36 building trellis 2.6 5.3 7.9 10.5 13.2 15.8 18.4 21.1 23.7 26.3 28.9 31.6 34.2 36.8 39.5 42.1 44.7 47.4 50.0 52.6 55.3 57.9 60.5 63.2 65.8 68.4 71.1 73.7 76.3 78.9 81.6 84.2 86.8 89.5 92.1 94.7 97.4 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support