-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_13530134-13742565

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_17-snap.2830-T1
Valid prediction for GlimmerHMM_glimmerT_42323-T1
Couldn't classify 144762, 144890
Sorry, prediction pasa_asmbl_18467.p2 fails validation.
(CTC)	 CT	144762-144890	GT	AGG
(GTG)	 AG	147212-147337	GT	AGG
(CTG)	 AG	147957-148067	GA	AGG
-recovered pasa_asmbl_18467.p2, terminal, 147957, 148067
-recovered pasa_asmbl_18467.p2, internal, 147212, 147337
Valid prediction for GeneMark_model.73220_t
Valid prediction for snap_scaffold_17-snap.2841-T1
Valid prediction for snap_scaffold_17-snap.2835-T1
Valid prediction for GeneMark_model.73199_t
Valid prediction for snap_scaffold_17-snap.2807-T1
Valid prediction for CodingQuarry_transcript_22195-T1
Valid prediction for GeneMark_model.73193_t
Valid prediction for GlimmerHMM_glimmerT_42338-T1
Valid prediction for GeneMark_model.73207_t
Valid prediction for snap_scaffold_17-snap.2828-T1
Valid prediction for GeneMark_model.73201_t
Valid prediction for GeneMark_model.73186_t
Valid prediction for GeneMark_model.73224_t
Valid prediction for GlimmerHMM_glimmerT_42335-T1
Valid prediction for GeneMark_model.73210_t
Valid prediction for GeneMark_model.73197_t
Valid prediction for GeneMark_model.73203_t
Valid prediction for snap_scaffold_17-snap.2825-T1
Valid prediction for Augustus_model.g28350.t1
Valid prediction for GeneMark_model.73192_t
Valid prediction for GeneMark_model.73214_t
Valid prediction for snap_scaffold_17-snap.2809-T1
Valid prediction for GlimmerHMM_glimmerT_42342-T1
Valid prediction for GeneMark_model.73187_t
Valid prediction for snap_scaffold_17-snap.2811-T1
Valid prediction for Augustus_model.g28346.t1
Valid prediction for snap_scaffold_17-snap.2812-T1
Valid prediction for Augustus_model.g28338.t1
Valid prediction for GeneMark_model.73218_t
Couldn't classify 76635, 76665
Couldn't classify 78085, 78147
Sorry, prediction pasa_asmbl_18650.p1 fails validation.
(GTC)	 TG	76635-76665	GT	TGG
(ACC)	 AG	77354-77601	GT	AGG
(GTG)	 AG	78085-78147	AC	ACA
-recovered pasa_asmbl_18650.p1, internal, 77354, 77601
Valid prediction for GeneMark_model.73217_t
Valid prediction for snap_scaffold_17-snap.2820-T1
Valid prediction for GlimmerHMM_glimmerT_42327-T1
Valid prediction for GeneMark_model.73225_t
Valid prediction for GeneMark_model.73176_t
Valid prediction for GeneMark_model.73191_t
Valid prediction for Augustus_model.g28347.t1
Valid prediction for snap_scaffold_17-snap.2805-T1
Valid prediction for GeneMark_model.73181_t
Valid prediction for snap_scaffold_17-snap.2832-T1
Valid prediction for snap_scaffold_17-snap.2834-T1
Valid prediction for snap_scaffold_17-snap.2840-T1
Valid prediction for snap_scaffold_17-snap.2801-T1
Valid prediction for GlimmerHMM_glimmerT_42333-T1
Valid prediction for Augustus_model.g28339.t1
Valid prediction for GlimmerHMM_glimmerT_42325-T1
Valid prediction for GeneMark_model.73184_t
Valid prediction for snap_scaffold_17-snap.2824-T1
Valid prediction for snap_scaffold_17-snap.2838-T1
Valid prediction for snap_scaffold_17-snap.2847-T1
Valid prediction for GeneMark_model.73183_t
Couldn't classify 7516, 7845
Couldn't classify 8843, 8995
Sorry, prediction pasa_asmbl_18454.p1 fails validation.
(TGT)	 TG	7516-7845	GT	AGG
(ACC)	 AG	8057-8146	GT	CTG
(TTC)	 AG	8267-8386	GT	AGG
(GTT)	 AG	8843-8995	AA	CCA
-recovered pasa_asmbl_18454.p1, internal, 8057, 8146
-recovered pasa_asmbl_18454.p1, internal, 8267, 8386
Valid prediction for GlimmerHMM_glimmerT_42331-T1
Valid prediction for GeneMark_model.73222_t
Valid prediction for Augustus_model.g28343.t1
Valid prediction for snap_scaffold_17-snap.2826-T1
Valid prediction for GlimmerHMM_glimmerT_42334-T1
Valid prediction for GeneMark_model.73212_t
Valid prediction for snap_scaffold_17-snap.2846-T1
Valid prediction for GeneMark_model.73229_t
Couldn't classify 58660, 58841
Couldn't classify 61486, 61578
Sorry, prediction pasa_asmbl_18456.p1 fails validation.
(CAG)	 CT	58660-58841	GT	AAG
(AGA)	 AG	60074-60170	GT	GGG
(ATC)	 AG	61486-61578	AG	GGA
-recovered pasa_asmbl_18456.p1, internal, 60074, 60170
Valid prediction for GeneMark_model.73195_t
Couldn't classify 10697, 10789
Sorry, prediction pasa_asmbl_18455.p1 fails validation.
(AAG)	 AG	10697-10789	GT	TCG
(ATC)	 AG	11498-11575	GT	AGG
(ATT)	 AG	11779-11871	GT	AGG
(TTG)	 AG	12048-12317	AG	AAA
-recovered pasa_asmbl_18455.p1, terminal, 12048, 12317
-recovered pasa_asmbl_18455.p1, internal, 10697, 10789
-recovered pasa_asmbl_18455.p1, internal, 11498, 11575
-recovered pasa_asmbl_18455.p1, internal, 11779, 11871
Valid prediction for Augustus_model.g28349.t1
Valid prediction for GeneMark_model.73179_t
Valid prediction for GeneMark_model.73227_t
Valid prediction for GeneMark_model.73234_t
Valid prediction for GlimmerHMM_glimmerT_42332-T1
Valid prediction for GeneMark_model.73177_t
Valid prediction for GeneMark_model.73215_t
Valid prediction for GeneMark_model.73189_t
Valid prediction for GlimmerHMM_glimmerT_42320-T1
Valid prediction for GlimmerHMM_glimmerT_42321-T1
Valid prediction for Augustus_model.g28352.t1
Valid prediction for GlimmerHMM_glimmerT_42329-T1
Valid prediction for Augustus_model.g28344.t1
Couldn't classify 73823, 74183
Couldn't classify 74625, 74887
Sorry, prediction pasa_asmbl_18458.p1 fails validation.
(CAT)	 TC	73823-74183	GT	AGG
(GAT)	 AG	74625-74887	GA	GGG

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g28348.t1
Valid prediction for GeneMark_model.73235_t
Valid prediction for snap_scaffold_17-snap.2829-T1
Valid prediction for snap_scaffold_17-snap.2806-T1
Valid prediction for GeneMark_model.73185_t
Valid prediction for GlimmerHMM_glimmerT_42337-T1
Valid prediction for GlimmerHMM_glimmerT_42326-T1
Valid prediction for snap_scaffold_17-snap.2817-T1
Couldn't classify 189156, 189279
Sorry, prediction pasa_asmbl_19418.p1 fails validation.
(GTG)	 CA	189156-189279	GT	AGG
(GTG)	 AG	189664-189821	GT	AGG
(ATC)	 AG	190510-190582	GT	AGG
(AGT)	 AG	191552-191750	GT	GGG
(GGT)	 AG	193010-193172	GT	TGG
(GTG)	 AG	193726-193940	GT	GTG
(GGA)	 AG	194797-194823	GT	GAG
(CAT)	 AG	195678-195866	GT	ACG
(GAA)	 AG	196230-196273	GT	AGG
(GTA)	 AG	197103-197119	GA	GAG
-recovered pasa_asmbl_19418.p1, terminal, 197103, 197119
-recovered pasa_asmbl_19418.p1, internal, 189664, 189821
-recovered pasa_asmbl_19418.p1, internal, 190510, 190582
-recovered pasa_asmbl_19418.p1, internal, 191552, 191750
-recovered pasa_asmbl_19418.p1, internal, 193010, 193172
-recovered pasa_asmbl_19418.p1, internal, 193726, 193940
-recovered pasa_asmbl_19418.p1, internal, 194797, 194823
-recovered pasa_asmbl_19418.p1, internal, 195678, 195866
-recovered pasa_asmbl_19418.p1, internal, 196230, 196273
Valid prediction for snap_scaffold_17-snap.2848-T1
Valid prediction for snap_scaffold_17-snap.2816-T1
Valid prediction for GlimmerHMM_glimmerT_42341-T1
Valid prediction for Augustus_model.g28357.t1
Valid prediction for snap_scaffold_17-snap.2823-T1
Valid prediction for GeneMark_model.73223_t
Valid prediction for snap_scaffold_17-snap.2839-T1
Valid prediction for GeneMark_model.73200_t
Valid prediction for snap_scaffold_17-snap.2819-T1
Valid prediction for GeneMark_model.73180_t
Valid prediction for Augustus_model.g28340.t1
Valid prediction for GeneMark_model.73208_t
Valid prediction for snap_scaffold_17-snap.2813-T1
Valid prediction for snap_scaffold_17-snap.2814-T1
Valid prediction for HiQ_model.g28341.t1
Valid prediction for GeneMark_model.73190_t
Valid prediction for GeneMark_model.73226_t
Valid prediction for GlimmerHMM_glimmerT_42322-T1
Valid prediction for snap_scaffold_17-snap.2837-T1
Valid prediction for GeneMark_model.73188_t
Valid prediction for GeneMark_model.73230_t
Valid prediction for GeneMark_model.73178_t
Valid prediction for snap_scaffold_17-snap.2818-T1
Valid prediction for snap_scaffold_17-snap.2844-T1
Valid prediction for GeneMark_model.73194_t
Valid prediction for GeneMark_model.73213_t
Valid prediction for Augustus_model.g28351.t1
Valid prediction for GeneMark_model.73211_t
Valid prediction for GeneMark_model.73233_t
Valid prediction for snap_scaffold_17-snap.2842-T1
Valid prediction for snap_scaffold_17-snap.2815-T1
Valid prediction for GeneMark_model.73219_t
Valid prediction for GeneMark_model.73202_t
Valid prediction for snap_scaffold_17-snap.2849-T1
Valid prediction for snap_scaffold_17-snap.2831-T1
Valid prediction for GeneMark_model.73209_t
Valid prediction for snap_scaffold_17-snap.2822-T1
Valid prediction for GlimmerHMM_glimmerT_42343-T1
Valid prediction for GeneMark_model.73182_t
Valid prediction for GeneMark_model.73204_t
Valid prediction for snap_scaffold_17-snap.2804-T1
Valid prediction for GeneMark_model.73205_t
Valid prediction for Augustus_model.g28345.t1
Valid prediction for GeneMark_model.73198_t
Valid prediction for snap_scaffold_17-snap.2808-T1
Valid prediction for snap_scaffold_17-snap.2833-T1
Valid prediction for snap_scaffold_17-snap.2821-T1
Valid prediction for GeneMark_model.73232_t
Valid prediction for snap_scaffold_17-snap.2836-T1
Valid prediction for pasa_asmbl_19422.p1
Valid prediction for snap_scaffold_17-snap.2827-T1
Valid prediction for snap_scaffold_17-snap.2810-T1
Valid prediction for Augustus_model.g28353.t1
Valid prediction for snap_scaffold_17-snap.2843-T1
Valid prediction for snap_scaffold_17-snap.2802-T1
Valid prediction for GeneMark_model.73196_t
Valid prediction for GlimmerHMM_glimmerT_42336-T1
Valid prediction for GlimmerHMM_glimmerT_42339-T1
Valid prediction for GlimmerHMM_glimmerT_42324-T1
Valid prediction for Augustus_model.g28354.t1
Valid prediction for GeneMark_model.73216_t
Valid prediction for GlimmerHMM_glimmerT_42328-T1
Valid prediction for Augustus_model.g28355.t1
Valid prediction for GlimmerHMM_glimmerT_42340-T1
Valid prediction for snap_scaffold_17-snap.2803-T1
Valid prediction for GeneMark_model.73228_t
Valid prediction for GeneMark_model.73221_t
Valid prediction for GlimmerHMM_glimmerT_42330-T1
Valid prediction for GeneMark_model.73237_t
Valid prediction for Augustus_model.g28356.t1
Valid prediction for Augustus_model.g28342.t1
Valid prediction for snap_scaffold_17-snap.2845-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 12317, rend_intergenic: 6347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17071, rend_intergenic: 15728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20445, rend_intergenic: 17930  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20853, rend_intergenic: 20679  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22354, rend_intergenic: 20986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25071, rend_intergenic: 22540  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68417, rend_intergenic: 37985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80183, rend_intergenic: 70987  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99278, rend_intergenic: 93371  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113408, rend_intergenic: 105611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119052, rend_intergenic: 115999  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119446, rend_intergenic: 119068  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127618, rend_intergenic: 119588  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129715, rend_intergenic: 128315  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136017, rend_intergenic: 131891  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142570, rend_intergenic: 137421  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148852, rend_intergenic: 142589  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154088, rend_intergenic: 151912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174359, rend_intergenic: 155520  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182658, rend_intergenic: 174528  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192053, rend_intergenic: 187888  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209344, rend_intergenic: 195920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 212432
-exon list size: 899


building trellis

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53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.6    
99.7    
99.8    
99.9    
-found 36 predictions from path traversal
Error with prediction: snap lend_intergenic: 12317, rend_intergenic: 6347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17071, rend_intergenic: 15728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20445, rend_intergenic: 17930  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20853, rend_intergenic: 20679  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22354, rend_intergenic: 20986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25071, rend_intergenic: 22540  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68417, rend_intergenic: 37985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80183, rend_intergenic: 70987  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99278, rend_intergenic: 93371  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113408, rend_intergenic: 105611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119052, rend_intergenic: 115999  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119446, rend_intergenic: 119068  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127618, rend_intergenic: 119588  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129715, rend_intergenic: 128315  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136017, rend_intergenic: 131891  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142570, rend_intergenic: 137421  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148852, rend_intergenic: 142589  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154088, rend_intergenic: 151912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174359, rend_intergenic: 155520  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182658, rend_intergenic: 174528  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192053, rend_intergenic: 187888  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209344, rend_intergenic: 195920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support