-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_13071040-13341012 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for CodingQuarry_transcript_22182-T1 Valid prediction for GlimmerHMM_glimmerT_42264-T1 Valid prediction for GeneMark_model.73107_t Valid prediction for snap_scaffold_17-snap.2740-T1 Valid prediction for CodingQuarry_transcript_22183-T1 Valid prediction for GeneMark_model.73118_t Valid prediction for snap_scaffold_17-snap.2726-T1 Valid prediction for GeneMark_model.73080_t Valid prediction for Augustus_model.g28317.t1 Valid prediction for GeneMark_model.73050_t Valid prediction for GeneMark_model.73094_t Valid prediction for GlimmerHMM_glimmerT_42284-T1 Valid prediction for snap_scaffold_17-snap.2754-T1 Valid prediction for GeneMark_model.73123_t Valid prediction for Augustus_model.g28307.t1 Valid prediction for GlimmerHMM_glimmerT_42274-T1 Couldn't classify 85127, 85209 Sorry, prediction pasa_asmbl_18440.p1 fails validation. (CAG) TG 85127-85209 GT CTG (GGA) AG 87955-88067 GT GGG (ATA) AG 88326-88433 GT ACG (TGC) AG 88964-89046 GT AGG (GAG) AG 89320-89397 GT AGG (TAC) AG 89838-90038 GC AAG -recovered pasa_asmbl_18440.p1, terminal, 89838, 90038 -recovered pasa_asmbl_18440.p1, internal, 87955, 88067 -recovered pasa_asmbl_18440.p1, internal, 88326, 88433 -recovered pasa_asmbl_18440.p1, internal, 88964, 89046 -recovered pasa_asmbl_18440.p1, internal, 89320, 89397 -recovered pasa_asmbl_18440.p1, internal, 89838, 90038 Valid prediction for GeneMark_model.73085_t Valid prediction for GeneMark_model.73067_t Valid prediction for snap_scaffold_17-snap.2737-T1 Valid prediction for GlimmerHMM_glimmerT_42270-T1 Valid prediction for GeneMark_model.73077_t Valid prediction for GeneMark_model.73092_t Valid prediction for snap_scaffold_17-snap.2728-T1 Valid prediction for snap_scaffold_17-snap.2696-T1 Valid prediction for Augustus_model.g28310.t1 Valid prediction for GeneMark_model.73115_t Valid prediction for GlimmerHMM_glimmerT_42269-T1 Valid prediction for snap_scaffold_17-snap.2711-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_42273-T1 Valid prediction for snap_scaffold_17-snap.2738-T1 Valid prediction for snap_scaffold_17-snap.2713-T1 Valid prediction for snap_scaffold_17-snap.2736-T1 Valid prediction for GeneMark_model.73053_t Valid prediction for HiQ_model.g28301.t1 Valid prediction for Augustus_model.g28316.t1 Valid prediction for GeneMark_model.73119_t Valid prediction for GeneMark_model.73071_t Valid prediction for GlimmerHMM_glimmerT_42285-T1 Valid prediction for GlimmerHMM_glimmerT_42279-T1 Valid prediction for snap_scaffold_17-snap.2720-T1 Valid prediction for GeneMark_model.73066_t Valid prediction for GeneMark_model.73088_t Valid prediction for snap_scaffold_17-snap.2707-T1 Valid prediction for GeneMark_model.73121_t Valid prediction for Augustus_model.g28300.t1 Valid prediction for GlimmerHMM_glimmerT_42265-T1 Valid prediction for GlimmerHMM_glimmerT_42287-T1 Valid prediction for Augustus_model.g28315.t1 Valid prediction for pasa_asmbl_18437.p1 Couldn't classify 243879, 243974 Couldn't classify 254027, 254136 Sorry, prediction pasa_asmbl_18443.p1 fails validation. (GAA) GT 243879-243974 GT AGG (GAT) AG 244738-244832 GT AGG (GCT) AG 245175-245273 GT AGG (GAC) AG 246444-246534 GT ACG (GAG) AG 248811-248990 GT GGG (TAC) AG 250549-250667 GT AGG (TGC) AG 252967-253073 GT CGG (GGA) AG 254027-254136 CG GAC -recovered pasa_asmbl_18443.p1, internal, 244738, 244832 -recovered pasa_asmbl_18443.p1, internal, 245175, 245273 -recovered pasa_asmbl_18443.p1, internal, 246444, 246534 -recovered pasa_asmbl_18443.p1, internal, 248811, 248990 -recovered pasa_asmbl_18443.p1, internal, 250549, 250667 -recovered pasa_asmbl_18443.p1, internal, 252967, 253073 Valid prediction for snap_scaffold_17-snap.2718-T1 Valid prediction for GeneMark_model.73062_t Valid prediction for GeneMark_model.73112_t Valid prediction for snap_scaffold_17-snap.2753-T1 Valid prediction for GlimmerHMM_glimmerT_42263-T1 Valid prediction for snap_scaffold_17-snap.2751-T1 Valid prediction for GeneMark_model.73055_t Valid prediction for snap_scaffold_17-snap.2730-T1 Valid prediction for GeneMark_model.73108_t Valid prediction for GeneMark_model.73099_t Valid prediction for GlimmerHMM_glimmerT_42289-T1 Valid prediction for GeneMark_model.73090_t Valid prediction for snap_scaffold_17-snap.2700-T1 Valid prediction for GeneMark_model.73069_t Valid prediction for GeneMark_model.73073_t Valid prediction for snap_scaffold_17-snap.2712-T1 Valid prediction for Augustus_model.g28304.t1 Valid prediction for snap_scaffold_17-snap.2714-T1 Valid prediction for GlimmerHMM_glimmerT_42283-T1 Valid prediction for snap_scaffold_17-snap.2745-T1 Valid prediction for GlimmerHMM_glimmerT_42282-T1 Valid prediction for snap_scaffold_17-snap.2733-T1 Valid prediction for GeneMark_model.73059_t Valid prediction for HiQ_model.g28302.t1 Valid prediction for Augustus_model.g28314.t1 Valid prediction for GeneMark_model.73057_t Valid prediction for GeneMark_model.73125_t Valid prediction for Augustus_model.g28319.t1 Valid prediction for Augustus_model.g28305.t1 Valid prediction for snap_scaffold_17-snap.2723-T1 Valid prediction for snap_scaffold_17-snap.2742-T1 Valid prediction for snap_scaffold_17-snap.2703-T1 Valid prediction for Augustus_model.g28320.t1 Valid prediction for GeneMark_model.73083_t Valid prediction for GeneMark_model.73075_t Valid prediction for GeneMark_model.73104_t Couldn't classify 63848, 63926 Sorry, prediction pasa_asmbl_18439.p1 fails validation. (ATG) CC 56881-56958 GT AGG (AAA) AG 57538-57578 GT GGG (GTG) AG 57666-57738 GT AGG (AAT) AG 57918-57968 GT CTG (TCC) AG 58228-58397 GT GAG (ACG) AG 60934-60969 GT TGG (CTT) AG 63003-63102 GT AGG (ATC) AG 63293-63444 GT GGG (GAG) AG 63848-63926 GT AGG -recovered pasa_asmbl_18439.p1, initial, 56881, 56958 -recovered pasa_asmbl_18439.p1, internal, 57538, 57578 -recovered pasa_asmbl_18439.p1, internal, 57666, 57738 -recovered pasa_asmbl_18439.p1, internal, 57918, 57968 -recovered pasa_asmbl_18439.p1, internal, 58228, 58397 -recovered pasa_asmbl_18439.p1, internal, 60934, 60969 -recovered pasa_asmbl_18439.p1, internal, 63003, 63102 -recovered pasa_asmbl_18439.p1, internal, 63293, 63444 -recovered pasa_asmbl_18439.p1, internal, 63848, 63926 Valid prediction for GlimmerHMM_glimmerT_42271-T1 Valid prediction for GeneMark_model.73044_t Valid prediction for GeneMark_model.73101_t Valid prediction for GeneMark_model.73046_t Valid prediction for snap_scaffold_17-snap.2719-T1 Valid prediction for GeneMark_model.73110_t Couldn't classify 12091, 12297 Sorry, prediction pasa_asmbl_18435.p1 fails validation. (ACC) CT 12091-12297 GT CGG (ATG) AG 13653-13849 GT AGG (GTC) AG 14535-14697 TT GAT -recovered pasa_asmbl_18435.p1, initial, 13653, 13849 -recovered pasa_asmbl_18435.p1, terminal, 14535, 14697 -recovered pasa_asmbl_18435.p1, internal, 13653, 13849 Valid prediction for snap_scaffold_17-snap.2731-T1 Valid prediction for Augustus_model.g28318.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_17-snap.2710-T1 Valid prediction for snap_scaffold_17-snap.2716-T1 Couldn't classify 150700, 150798 Sorry, prediction pasa_asmbl_19404.p1 fails validation. (CTC) AC 150700-150798 GT CTG (GGG) AG 151281-151457 GT AGG (GTC) AG 151907-152053 GT TGG (GGC) AG 152548-152676 AC AGA -recovered pasa_asmbl_19404.p1, terminal, 152548, 152676 -recovered pasa_asmbl_19404.p1, internal, 151281, 151457 -recovered pasa_asmbl_19404.p1, internal, 151907, 152053 Valid prediction for GeneMark_model.73122_t Valid prediction for GeneMark_model.73089_t Valid prediction for snap_scaffold_17-snap.2746-T1 Valid prediction for GeneMark_model.73061_t Valid prediction for snap_scaffold_17-snap.2741-T1 Valid prediction for CodingQuarry_transcript_22184-T1 Valid prediction for GeneMark_model.73054_t Valid prediction for snap_scaffold_17-snap.2734-T1 Valid prediction for snap_scaffold_17-snap.2708-T1 Valid prediction for snap_scaffold_17-snap.2705-T1 Valid prediction for snap_scaffold_17-snap.2709-T1 Valid prediction for GeneMark_model.73103_t Valid prediction for GeneMark_model.73124_t Valid prediction for snap_scaffold_17-snap.2735-T1 Valid prediction for snap_scaffold_17-snap.2744-T1 Valid prediction for snap_scaffold_17-snap.2749-T1 Valid prediction for Augustus_model.g28303.t1 Valid prediction for GlimmerHMM_glimmerT_42276-T1 Valid prediction for GlimmerHMM_glimmerT_42278-T1 Valid prediction for GeneMark_model.73105_t Valid prediction for GeneMark_model.73045_t Valid prediction for CodingQuarry_transcript_22188-T1 Valid prediction for GeneMark_model.73113_t Couldn't classify 167219, 167307 Couldn't classify 170359, 170471 Sorry, prediction pasa_asmbl_19401.p1 fails validation. (CAG) CA 167219-167307 GT GGG (TGG) AG 167856-167988 GT AGG (GGA) AG 168528-168624 GT AGG (GGA) AG 168928-169098 GT GAG (GTG) AG 169640-169794 GT AGG (GCC) AG 170077-170263 GT AGG (GGA) AG 170359-170471 GG GCG -recovered pasa_asmbl_19401.p1, internal, 167856, 167988 -recovered pasa_asmbl_19401.p1, internal, 168528, 168624 -recovered pasa_asmbl_19401.p1, internal, 168928, 169098 -recovered pasa_asmbl_19401.p1, internal, 169640, 169794 -recovered pasa_asmbl_19401.p1, internal, 170077, 170263 Valid prediction for GeneMark_model.73096_t Valid prediction for snap_scaffold_17-snap.2732-T1 Valid prediction for GlimmerHMM_glimmerT_42288-T1 Valid prediction for snap_scaffold_17-snap.2755-T1 Valid prediction for GlimmerHMM_glimmerT_42280-T1 Valid prediction for GeneMark_model.73091_t Valid prediction for CodingQuarry_transcript_22189-T1 Valid prediction for GeneMark_model.73068_t Valid prediction for snap_scaffold_17-snap.2722-T1 Valid prediction for GlimmerHMM_glimmerT_42272-T1 Valid prediction for GeneMark_model.73074_t Valid prediction for Augustus_model.g28313.t1 Valid prediction for snap_scaffold_17-snap.2697-T1 Valid prediction for snap_scaffold_17-snap.2729-T1 Valid prediction for snap_scaffold_17-snap.2739-T1 Valid prediction for snap_scaffold_17-snap.2750-T1 Valid prediction for GeneMark_model.73070_t Valid prediction for CodingQuarry_transcript_22190-T1 Valid prediction for GlimmerHMM_glimmerT_42268-T1 Valid prediction for GeneMark_model.73084_t Valid prediction for Augustus_model.g28311.t1 Valid prediction for GlimmerHMM_glimmerT_42281-T1 Valid prediction for GeneMark_model.73065_t Valid prediction for Augustus_model.g28312.t1 Valid prediction for CodingQuarry_transcript_22185-T1 Valid prediction for CodingQuarry_transcript_22187-T1 Valid prediction for GeneMark_model.73072_t Valid prediction for GeneMark_model.73049_t Valid prediction for GeneMark_model.73106_t Valid prediction for GeneMark_model.73079_t Valid prediction for CodingQuarry_transcript_22186-T1 Valid prediction for GeneMark_model.73100_t Valid prediction for GeneMark_model.73102_t Valid prediction for Augustus_model.g28321.t1 Valid prediction for snap_scaffold_17-snap.2715-T1 Valid prediction for HiQ_model.g28309.t1 Couldn't classify 159221, 159400 Couldn't classify 162156, 162265 Sorry, prediction pasa_asmbl_19402.p1 fails validation. (GGA) GT 159221-159400 GT GGG (GTA) AG 159717-159836 GT TGG (CCA) AG 160978-161101 GT GGG (GGA) AG 162156-162265 GT AGG -recovered pasa_asmbl_19402.p1, internal, 159717, 159836 -recovered pasa_asmbl_19402.p1, internal, 160978, 161101 -recovered pasa_asmbl_19402.p1, internal, 162156, 162265 Couldn't classify 263252, 263599 Sorry, prediction pasa_asmbl_19396.p2 fails validation. (TTG) GC 263252-263599 AA GAA Valid prediction for GeneMark_model.73082_t Valid prediction for GeneMark_model.73076_t Valid prediction for GeneMark_model.73120_t Valid prediction for snap_scaffold_17-snap.2743-T1 Valid prediction for snap_scaffold_17-snap.2701-T1 Valid prediction for pasa_asmbl_19407.p1 Valid prediction for snap_scaffold_17-snap.2747-T1 Couldn't classify 172603, 172845 Sorry, prediction pasa_asmbl_19399.p1 fails validation. (GAG) AG 172603-172845 GT TGG (GGC) AG 173914-174099 GT CAG (GAA) AG 174540-174673 GT CTG (CTA) AG 175463-175547 TG GAT -recovered pasa_asmbl_19399.p1, terminal, 175463, 175547 -recovered pasa_asmbl_19399.p1, internal, 172603, 172845 -recovered pasa_asmbl_19399.p1, internal, 173914, 174099 -recovered pasa_asmbl_19399.p1, internal, 174540, 174673 Valid prediction for GeneMark_model.73047_t Valid prediction for GeneMark_model.73097_t Valid prediction for snap_scaffold_17-snap.2706-T1 Valid prediction for GeneMark_model.73048_t Valid prediction for snap_scaffold_17-snap.2725-T1 Valid prediction for GeneMark_model.73093_t Valid prediction for snap_scaffold_17-snap.2699-T1 Valid prediction for GlimmerHMM_glimmerT_42266-T1 Valid prediction for GeneMark_model.73064_t Valid prediction for Augustus_model.g28308.t1 Valid prediction for snap_scaffold_17-snap.2717-T1 Couldn't classify 158553, 158692 Sorry, prediction pasa_asmbl_19403.p1 fails validation. (ATG) CT 157088-157195 GT AGG (AAC) AG 157456-157602 GT AGG (GGA) AG 157726-157809 GT TGG (GAG) AG 158088-158202 GT AGG (GAT) AG 158553-158692 AA CCA -recovered pasa_asmbl_19403.p1, initial, 157088, 157195 add_exon() Sorry, pasa_asmbl_19403.p1 158088-158202-terminal-3 is invalid. -recovered pasa_asmbl_19403.p1, terminal, 158088, 158202 -recovered pasa_asmbl_19403.p1, internal, 157456, 157602 -recovered pasa_asmbl_19403.p1, internal, 157726, 157809 -recovered pasa_asmbl_19403.p1, internal, 158088, 158202 Valid prediction for GlimmerHMM_glimmerT_42286-T1 Valid prediction for snap_scaffold_17-snap.2724-T1 Valid prediction for GeneMark_model.73086_t Valid prediction for GeneMark_model.73058_t Valid prediction for snap_scaffold_17-snap.2698-T1 Valid prediction for GlimmerHMM_glimmerT_42267-T1 Valid prediction for snap_scaffold_17-snap.2721-T1 Valid prediction for snap_scaffold_17-snap.2727-T1 Valid prediction for GeneMark_model.73081_t Valid prediction for GeneMark_model.73117_t Valid prediction for snap_scaffold_17-snap.2752-T1 Valid prediction for GeneMark_model.73056_t Valid prediction for GeneMark_model.73109_t Valid prediction for GeneMark_model.73087_t Valid prediction for GeneMark_model.73060_t Valid prediction for GeneMark_model.73043_t Valid prediction for GlimmerHMM_glimmerT_42277-T1 Valid prediction for GeneMark_model.73063_t Valid prediction for GeneMark_model.73051_t Valid prediction for Augustus_model.g28306.t1 Valid prediction for GeneMark_model.73116_t Valid prediction for GeneMark_model.73098_t Valid prediction for GeneMark_model.73111_t Valid prediction for snap_scaffold_17-snap.2702-T1 Valid prediction for GlimmerHMM_glimmerT_42275-T1 Valid prediction for snap_scaffold_17-snap.2704-T1 Valid prediction for GeneMark_model.73052_t Valid prediction for GeneMark_model.73114_t Valid prediction for snap_scaffold_17-snap.2748-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14697, rend_intergenic: 6375 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21140, rend_intergenic: 16674 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25952, rend_intergenic: 25775 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60973, rend_intergenic: 26447 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71492, rend_intergenic: 63265 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 76678, rend_intergenic: 72078 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90038, rend_intergenic: 87163 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112535, rend_intergenic: 94954 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126988, rend_intergenic: 123952 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132396, rend_intergenic: 131771 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133887, rend_intergenic: 132698 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144037, rend_intergenic: 134680 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162299, rend_intergenic: 145978 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163250, rend_intergenic: 162577 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168152, rend_intergenic: 163649 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190909, rend_intergenic: 186364 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197832, rend_intergenic: 192070 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205096, rend_intergenic: 201480 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219726, rend_intergenic: 206214 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220725, rend_intergenic: 220681 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242831, rend_intergenic: 220991 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 247413, rend_intergenic: 243929 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 264126, rend_intergenic: 253237 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 269973 -exon list size: 1148 building trellis 0.1 0.2 0.3 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.7 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.7 15.8 15.9 16.0 16.1 16.2 16.3 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.0 29.1 29.2 29.3 29.4 29.5 29.6 29.7 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.0 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.3 56.4 56.5 56.6 56.7 56.8 56.9 57.0 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.3 70.4 70.5 70.6 70.7 70.8 70.9 71.0 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.7 83.8 83.9 84.0 84.1 84.2 84.3 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.3 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.7 99.8 99.9 -found 56 predictions from path traversal Error with prediction: snap lend_intergenic: 14697, rend_intergenic: 6375 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21140, rend_intergenic: 16674 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25952, rend_intergenic: 25775 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60973, rend_intergenic: 26447 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71492, rend_intergenic: 63265 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 76678, rend_intergenic: 72078 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90038, rend_intergenic: 87163 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112535, rend_intergenic: 94954 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126988, rend_intergenic: 123952 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132396, rend_intergenic: 131771 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133887, rend_intergenic: 132698 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144037, rend_intergenic: 134680 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162299, rend_intergenic: 145978 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163250, rend_intergenic: 162577 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168152, rend_intergenic: 163649 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190909, rend_intergenic: 186364 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197832, rend_intergenic: 192070 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205096, rend_intergenic: 201480 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219726, rend_intergenic: 206214 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220725, rend_intergenic: 220681 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242831, rend_intergenic: 220991 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 247413, rend_intergenic: 243929 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 264126, rend_intergenic: 253237 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 23 predictions persist after filtering for low support