-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_12426197-12719372 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.72882_t Valid prediction for GeneMark_model.72798_t Valid prediction for GeneMark_model.72861_t Valid prediction for GeneMark_model.72786_t Valid prediction for snap_scaffold_17-snap.2557-T1 Valid prediction for GeneMark_model.72790_t Valid prediction for Augustus_model.g28266.t1 Valid prediction for GlimmerHMM_glimmerT_42174-T1 Valid prediction for GeneMark_model.72808_t Valid prediction for GeneMark_model.72871_t Valid prediction for GeneMark_model.72831_t Valid prediction for GeneMark_model.72892_t Valid prediction for Augustus_model.g28267.t1 Valid prediction for GeneMark_model.72830_t Valid prediction for snap_scaffold_17-snap.2563-T1 Valid prediction for snap_scaffold_17-snap.2555-T1 Valid prediction for snap_scaffold_17-snap.2573-T1 Valid prediction for GeneMark_model.72801_t Valid prediction for snap_scaffold_17-snap.2581-T1 Valid prediction for snap_scaffold_17-snap.2552-T1 Valid prediction for snap_scaffold_17-snap.2569-T1 Valid prediction for snap_scaffold_17-snap.2570-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_17-snap.2551-T1 Valid prediction for snap_scaffold_17-snap.2602-T1 Valid prediction for Augustus_model.g28259.t1 Valid prediction for GeneMark_model.72854_t Valid prediction for GlimmerHMM_glimmerT_42205-T1 Valid prediction for GeneMark_model.72867_t Valid prediction for GlimmerHMM_glimmerT_42194-T1 Valid prediction for GlimmerHMM_glimmerT_42208-T1 Valid prediction for GeneMark_model.72903_t Valid prediction for GeneMark_model.72834_t Valid prediction for snap_scaffold_17-snap.2592-T1 Valid prediction for GeneMark_model.72865_t Valid prediction for GeneMark_model.72890_t Valid prediction for Augustus_model.g28257.t1 Valid prediction for snap_scaffold_17-snap.2607-T1 Valid prediction for GeneMark_model.72842_t Valid prediction for GeneMark_model.72824_t Valid prediction for GlimmerHMM_glimmerT_42207-T1 Valid prediction for GeneMark_model.72880_t Valid prediction for GeneMark_model.72870_t Valid prediction for GeneMark_model.72858_t Valid prediction for GeneMark_model.72888_t Valid prediction for GeneMark_model.72799_t Valid prediction for GeneMark_model.72818_t Valid prediction for GeneMark_model.72856_t Valid prediction for GeneMark_model.72805_t Valid prediction for GeneMark_model.72850_t Valid prediction for snap_scaffold_17-snap.2575-T1 Valid prediction for GeneMark_model.72877_t Valid prediction for GeneMark_model.72852_t Valid prediction for GeneMark_model.72886_t Valid prediction for GeneMark_model.72885_t Valid prediction for GlimmerHMM_glimmerT_42185-T1 Valid prediction for GeneMark_model.72812_t Valid prediction for snap_scaffold_17-snap.2606-T1 Valid prediction for GeneMark_model.72838_t Valid prediction for GeneMark_model.72825_t Valid prediction for Augustus_model.g28268.t1 Valid prediction for Augustus_model.g28258.t1 Valid prediction for GlimmerHMM_glimmerT_42200-T1 Valid prediction for snap_scaffold_17-snap.2587-T1 Valid prediction for GeneMark_model.72794_t Valid prediction for GeneMark_model.72873_t Valid prediction for Augustus_model.g28261.t1 Valid prediction for GeneMark_model.72803_t Valid prediction for snap_scaffold_17-snap.2564-T1 Valid prediction for snap_scaffold_17-snap.2605-T1 Valid prediction for GeneMark_model.72840_t Valid prediction for snap_scaffold_17-snap.2566-T1 Valid prediction for GeneMark_model.72875_t Valid prediction for GlimmerHMM_glimmerT_42181-T1 Valid prediction for snap_scaffold_17-snap.2577-T1 Valid prediction for snap_scaffold_17-snap.2580-T1 Valid prediction for GeneMark_model.72792_t Valid prediction for GeneMark_model.72782_t Valid prediction for GeneMark_model.72814_t Valid prediction for GeneMark_model.72900_t Valid prediction for snap_scaffold_17-snap.2603-T1 Valid prediction for GlimmerHMM_glimmerT_42199-T1 Valid prediction for snap_scaffold_17-snap.2594-T1 Valid prediction for GeneMark_model.72816_t Valid prediction for snap_scaffold_17-snap.2560-T1 Valid prediction for snap_scaffold_17-snap.2612-T1 Valid prediction for GlimmerHMM_glimmerT_42203-T1 Valid prediction for GeneMark_model.72893_t Valid prediction for GeneMark_model.72883_t Valid prediction for GeneMark_model.72863_t Valid prediction for GeneMark_model.72789_t Valid prediction for snap_scaffold_17-snap.2559-T1 Valid prediction for snap_scaffold_17-snap.2595-T1 Valid prediction for snap_scaffold_17-snap.2597-T1 Valid prediction for GeneMark_model.72898_t Valid prediction for GeneMark_model.72829_t Valid prediction for snap_scaffold_17-snap.2565-T1 Valid prediction for GeneMark_model.72902_t Valid prediction for GeneMark_model.72827_t Valid prediction for GeneMark_model.72895_t Valid prediction for GeneMark_model.72846_t Valid prediction for GlimmerHMM_glimmerT_42178-T1 Valid prediction for GlimmerHMM_glimmerT_42186-T1 Valid prediction for GeneMark_model.72822_t Valid prediction for snap_scaffold_17-snap.2610-T1 Valid prediction for GeneMark_model.72841_t Valid prediction for GeneMark_model.72784_t Valid prediction for GeneMark_model.72813_t Valid prediction for GeneMark_model.72796_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.72879_t Valid prediction for GlimmerHMM_glimmerT_42175-T1 Valid prediction for GeneMark_model.72872_t Valid prediction for GeneMark_model.72849_t Valid prediction for snap_scaffold_17-snap.2578-T1 Valid prediction for snap_scaffold_17-snap.2582-T1 Valid prediction for GeneMark_model.72839_t Valid prediction for GeneMark_model.72832_t Valid prediction for snap_scaffold_17-snap.2591-T1 Valid prediction for GlimmerHMM_glimmerT_42193-T1 Valid prediction for GeneMark_model.72864_t Valid prediction for GlimmerHMM_glimmerT_42198-T1 Valid prediction for GeneMark_model.72817_t Valid prediction for Augustus_model.g28260.t1 Valid prediction for GeneMark_model.72887_t Valid prediction for GeneMark_model.72797_t Valid prediction for GeneMark_model.72897_t Valid prediction for snap_scaffold_17-snap.2599-T1 Valid prediction for GeneMark_model.72793_t Valid prediction for GeneMark_model.72851_t Valid prediction for GeneMark_model.72809_t Valid prediction for snap_scaffold_17-snap.2567-T1 Valid prediction for snap_scaffold_17-snap.2558-T1 Valid prediction for GeneMark_model.72868_t Valid prediction for GeneMark_model.72891_t Valid prediction for snap_scaffold_17-snap.2600-T1 Valid prediction for snap_scaffold_17-snap.2590-T1 Valid prediction for GeneMark_model.72899_t Valid prediction for GeneMark_model.72862_t Valid prediction for snap_scaffold_17-snap.2596-T1 Valid prediction for Augustus_model.g28262.t1 Valid prediction for Augustus_model.g28263.t1 Valid prediction for snap_scaffold_17-snap.2568-T1 Valid prediction for snap_scaffold_17-snap.2572-T1 Valid prediction for GeneMark_model.72781_t Valid prediction for GlimmerHMM_glimmerT_42177-T1 Valid prediction for snap_scaffold_17-snap.2598-T1 Valid prediction for GeneMark_model.72806_t Valid prediction for GeneMark_model.72810_t Valid prediction for snap_scaffold_17-snap.2584-T1 Valid prediction for snap_scaffold_17-snap.2604-T1 Valid prediction for snap_scaffold_17-snap.2593-T1 Valid prediction for GeneMark_model.72878_t Valid prediction for GeneMark_model.72807_t Valid prediction for GeneMark_model.72855_t Valid prediction for GlimmerHMM_glimmerT_42192-T1 Valid prediction for GeneMark_model.72783_t Valid prediction for GlimmerHMM_glimmerT_42201-T1 Valid prediction for GeneMark_model.72853_t Valid prediction for snap_scaffold_17-snap.2574-T1 Valid prediction for GeneMark_model.72876_t Valid prediction for GeneMark_model.72881_t Valid prediction for GeneMark_model.72788_t Valid prediction for GlimmerHMM_glimmerT_42179-T1 Valid prediction for snap_scaffold_17-snap.2588-T1 Valid prediction for GlimmerHMM_glimmerT_42189-T1 Valid prediction for snap_scaffold_17-snap.2561-T1 Valid prediction for snap_scaffold_17-snap.2556-T1 Valid prediction for GlimmerHMM_glimmerT_42190-T1 Valid prediction for GlimmerHMM_glimmerT_42191-T1 Valid prediction for GeneMark_model.72821_t Valid prediction for GlimmerHMM_glimmerT_42176-T1 Valid prediction for GeneMark_model.72869_t Valid prediction for GeneMark_model.72823_t Valid prediction for Augustus_model.g28265.t1 Valid prediction for GeneMark_model.72833_t Valid prediction for GeneMark_model.72819_t Valid prediction for GeneMark_model.72901_t Valid prediction for GlimmerHMM_glimmerT_42206-T1 Valid prediction for snap_scaffold_17-snap.2571-T1 Valid prediction for GlimmerHMM_glimmerT_42182-T1 Valid prediction for GeneMark_model.72889_t Valid prediction for GeneMark_model.72815_t Valid prediction for GeneMark_model.72896_t Valid prediction for Augustus_model.g28264.t1 Valid prediction for GlimmerHMM_glimmerT_42188-T1 Valid prediction for snap_scaffold_17-snap.2554-T1 Valid prediction for GlimmerHMM_glimmerT_42180-T1 Valid prediction for GlimmerHMM_glimmerT_42204-T1 Valid prediction for GeneMark_model.72837_t Valid prediction for snap_scaffold_17-snap.2613-T1 Valid prediction for snap_scaffold_17-snap.2583-T1 Valid prediction for snap_scaffold_17-snap.2553-T1 Valid prediction for snap_scaffold_17-snap.2608-T1 Valid prediction for GeneMark_model.72811_t Valid prediction for GeneMark_model.72847_t Valid prediction for GeneMark_model.72787_t Valid prediction for GlimmerHMM_glimmerT_42196-T1 Valid prediction for GeneMark_model.72804_t Valid prediction for GlimmerHMM_glimmerT_42183-T1 Valid prediction for GeneMark_model.72884_t Valid prediction for snap_scaffold_17-snap.2601-T1 Valid prediction for snap_scaffold_17-snap.2576-T1 Valid prediction for GeneMark_model.72843_t Valid prediction for snap_scaffold_17-snap.2579-T1 Valid prediction for GeneMark_model.72791_t Valid prediction for snap_scaffold_17-snap.2611-T1 Valid prediction for snap_scaffold_17-snap.2585-T1 Valid prediction for GeneMark_model.72866_t Valid prediction for GlimmerHMM_glimmerT_42184-T1 Valid prediction for snap_scaffold_17-snap.2562-T1 Valid prediction for GeneMark_model.72857_t Valid prediction for GlimmerHMM_glimmerT_42187-T1 Valid prediction for GeneMark_model.72802_t Valid prediction for GeneMark_model.72826_t Valid prediction for GeneMark_model.72859_t Valid prediction for GeneMark_model.72848_t Valid prediction for snap_scaffold_17-snap.2609-T1 Valid prediction for GlimmerHMM_glimmerT_42195-T1 Valid prediction for GeneMark_model.72845_t Valid prediction for snap_scaffold_17-snap.2586-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GeneMark_model.72835_t Valid prediction for GlimmerHMM_glimmerT_42197-T1 Valid prediction for snap_scaffold_17-snap.2589-T1 Valid prediction for GeneMark_model.72844_t Valid prediction for GeneMark_model.72800_t Valid prediction for GlimmerHMM_glimmerT_42202-T1 Valid prediction for GeneMark_model.72874_t Valid prediction for GeneMark_model.72785_t Valid prediction for GeneMark_model.72860_t Valid prediction for GeneMark_model.72894_t Valid prediction for GeneMark_model.72795_t Valid prediction for GeneMark_model.72828_t Valid prediction for snap_scaffold_17-snap.2550-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 85465, rend_intergenic: 85462 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 229434, rend_intergenic: 229431 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13416, rend_intergenic: 8537 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17309, rend_intergenic: 14642 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22222, rend_intergenic: 19950 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25171, rend_intergenic: 23806 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30617, rend_intergenic: 29136 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 33072, rend_intergenic: 30636 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39751, rend_intergenic: 33110 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53378, rend_intergenic: 41707 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61605, rend_intergenic: 53734 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 68613, rend_intergenic: 64580 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86510, rend_intergenic: 81554 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88460, rend_intergenic: 86536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92292, rend_intergenic: 91053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93933, rend_intergenic: 92730 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 116860, rend_intergenic: 97331 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121271, rend_intergenic: 116890 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148198, rend_intergenic: 122579 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149310, rend_intergenic: 148490 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 161511, rend_intergenic: 151239 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168836, rend_intergenic: 166082 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187185, rend_intergenic: 169622 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187669, rend_intergenic: 187215 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207022, rend_intergenic: 187711 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222590, rend_intergenic: 207041 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 237879, rend_intergenic: 224067 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249242, rend_intergenic: 238237 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254130, rend_intergenic: 249514 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 265670, rend_intergenic: 259457 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 273695, rend_intergenic: 266779 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 287988, rend_intergenic: 279305 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 289491, rend_intergenic: 288004 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 293176 -exon list size: 1528 building trellis 0.1 0.1 0.2 0.3 0.3 0.4 0.5 0.5 0.6 0.7 0.7 0.8 0.8 0.9 1.0 1.0 1.1 1.2 1.2 1.3 1.4 1.4 1.5 1.6 1.6 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.4 2.4 2.5 2.5 2.6 2.7 2.7 2.8 2.9 2.9 3.0 3.1 3.1 3.2 3.3 3.3 3.4 3.5 3.5 3.6 3.7 3.7 3.8 3.9 3.9 4.0 4.1 4.1 4.2 4.2 4.3 4.4 4.4 4.5 4.6 4.6 4.7 4.8 4.8 4.9 5.0 5.0 5.1 5.2 5.2 5.3 5.4 5.4 5.5 5.6 5.6 5.7 5.8 5.8 5.9 5.9 6.0 6.1 6.1 6.2 6.3 6.3 6.4 6.5 6.5 6.6 6.7 6.7 6.8 6.9 6.9 7.0 7.1 7.1 7.2 7.3 7.3 7.4 7.5 7.5 7.6 7.6 7.7 7.8 7.8 7.9 8.0 8.0 8.1 8.2 8.2 8.3 8.4 8.4 8.5 8.6 8.6 8.7 8.8 8.8 8.9 9.0 9.0 9.1 9.2 9.2 9.3 9.3 9.4 9.5 9.5 9.6 9.7 9.7 9.8 9.9 9.9 10.0 10.1 10.1 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.7 10.7 10.8 10.8 10.9 11.0 11.0 11.1 11.2 11.2 11.3 11.4 11.4 11.5 11.6 11.6 11.7 11.8 11.8 11.9 12.0 12.0 12.1 12.2 12.2 12.3 12.4 12.4 12.5 12.5 12.6 12.7 12.7 12.8 12.9 12.9 13.0 13.1 13.1 13.2 13.3 13.3 13.4 13.5 13.5 13.6 13.7 13.7 13.8 13.9 13.9 14.0 14.1 14.1 14.2 14.2 14.3 14.4 14.4 14.5 14.6 14.6 14.7 14.8 14.8 14.9 15.0 15.0 15.1 15.2 15.2 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.8 15.8 15.9 15.9 16.0 16.1 16.1 16.2 16.3 16.3 16.4 16.5 16.5 16.6 16.7 16.7 16.8 16.9 16.9 17.0 17.1 17.1 17.2 17.3 17.3 17.4 17.5 17.5 17.6 17.6 17.7 17.8 17.8 17.9 18.0 18.0 18.1 18.2 18.2 18.3 18.4 18.4 18.5 18.6 18.6 18.7 18.8 18.8 18.9 19.0 19.0 19.1 19.2 19.2 19.3 19.3 19.4 19.5 19.5 19.6 19.7 19.7 19.8 19.9 19.9 20.0 20.1 20.1 20.2 20.3 20.3 20.4 20.5 20.5 20.6 20.7 20.7 20.8 20.8 20.9 21.0 21.0 21.1 21.2 21.2 21.3 21.4 21.4 21.5 21.6 21.6 21.7 21.8 21.8 21.9 22.0 22.0 22.1 22.2 22.2 22.3 22.4 22.4 22.5 22.5 22.6 22.7 22.7 22.8 22.9 22.9 23.0 23.1 23.1 23.2 23.3 23.3 23.4 23.5 23.5 23.6 23.7 23.7 23.8 23.9 23.9 24.0 24.1 24.1 24.2 24.2 24.3 24.4 24.4 24.5 24.6 24.6 24.7 24.8 24.8 24.9 25.0 25.0 25.1 25.2 25.2 25.3 25.4 25.4 25.5 25.6 25.6 25.7 25.8 25.8 25.9 25.9 26.0 26.1 26.1 26.2 26.3 26.3 26.4 26.5 26.5 26.6 26.7 26.7 26.8 26.9 26.9 27.0 27.1 27.1 27.2 27.3 27.3 27.4 27.5 27.5 27.6 27.6 27.7 27.8 27.8 27.9 28.0 28.0 28.1 28.2 28.2 28.3 28.4 28.4 28.5 28.6 28.6 28.7 28.8 28.8 28.9 29.0 29.0 29.1 29.2 29.2 29.3 29.3 29.4 29.5 29.5 29.6 29.7 29.7 29.8 29.9 29.9 30.0 30.1 30.1 30.2 30.3 30.3 30.4 30.5 30.5 30.6 30.7 30.7 30.8 30.8 30.9 31.0 31.0 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.6 31.6 31.7 31.8 31.8 31.9 32.0 32.0 32.1 32.2 32.2 32.3 32.4 32.4 32.5 32.5 32.6 32.7 32.7 32.8 32.9 32.9 33.0 33.1 33.1 33.2 33.3 33.3 33.4 33.5 33.5 33.6 33.7 33.7 33.8 33.9 33.9 34.0 34.1 34.1 34.2 34.2 34.3 34.4 34.4 34.5 34.6 34.6 34.7 34.8 34.8 34.9 35.0 35.0 35.1 35.2 35.2 35.3 35.4 35.4 35.5 35.6 35.6 35.7 35.8 35.8 35.9 35.9 36.0 36.1 36.1 36.2 36.3 36.3 36.4 36.5 36.5 36.6 36.7 36.7 36.8 36.9 36.9 37.0 37.1 37.1 37.2 37.3 37.3 37.4 37.5 37.5 37.6 37.6 37.7 37.8 37.8 37.9 38.0 38.0 38.1 38.2 38.2 38.3 38.4 38.4 38.5 38.6 38.6 38.7 38.8 38.8 38.9 39.0 39.0 39.1 39.2 39.2 39.3 39.3 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.1 40.1 40.2 40.3 40.3 40.4 40.5 40.5 40.6 40.7 40.7 40.8 40.8 40.9 41.0 41.0 41.1 41.2 41.2 41.3 41.4 41.4 41.5 41.6 41.6 41.7 41.8 41.8 41.9 42.0 42.0 42.1 42.2 42.2 42.3 42.4 42.4 42.5 42.5 42.6 42.7 42.7 42.8 42.9 42.9 43.0 43.1 43.1 43.2 43.3 43.3 43.4 43.5 43.5 43.6 43.7 43.7 43.8 43.9 43.9 44.0 44.1 44.1 44.2 44.2 44.3 44.4 44.4 44.5 44.6 44.6 44.7 44.8 44.8 44.9 45.0 45.0 45.1 45.2 45.2 45.3 45.4 45.4 45.5 45.6 45.6 45.7 45.8 45.8 45.9 45.9 46.0 46.1 46.1 46.2 46.3 46.3 46.4 46.5 46.5 46.6 46.7 46.7 46.8 46.9 46.9 47.0 47.1 47.1 47.2 47.3 47.3 47.4 47.5 47.5 47.6 47.6 47.7 47.8 47.8 47.9 48.0 48.0 48.1 48.2 48.2 48.3 48.4 48.4 48.5 48.6 48.6 48.7 48.8 48.8 48.9 49.0 49.0 49.1 49.2 49.2 49.3 49.3 49.4 49.5 49.5 49.6 49.7 49.7 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.3 50.3 50.4 50.5 50.5 50.6 50.7 50.7 50.8 50.8 50.9 51.0 51.0 51.1 51.2 51.2 51.3 51.4 51.4 51.5 51.6 51.6 51.7 51.8 51.8 51.9 52.0 52.0 52.1 52.2 52.2 52.3 52.4 52.4 52.5 52.5 52.6 52.7 52.7 52.8 52.9 52.9 53.0 53.1 53.1 53.2 53.3 53.3 53.4 53.5 53.5 53.6 53.7 53.7 53.8 53.9 53.9 54.0 54.1 54.1 54.2 54.2 54.3 54.4 54.4 54.5 54.6 54.6 54.7 54.8 54.8 54.9 55.0 55.0 55.1 55.2 55.2 55.3 55.4 55.4 55.5 55.6 55.6 55.7 55.8 55.8 55.9 55.9 56.0 56.1 56.1 56.2 56.3 56.3 56.4 56.5 56.5 56.6 56.7 56.7 56.8 56.9 56.9 57.0 57.1 57.1 57.2 57.3 57.3 57.4 57.5 57.5 57.6 57.6 57.7 57.8 57.8 57.9 58.0 58.0 58.1 58.2 58.2 58.3 58.4 58.4 58.5 58.6 58.6 58.7 58.8 58.8 58.9 59.0 59.0 59.1 59.2 59.2 59.3 59.3 59.4 59.5 59.5 59.6 59.7 59.7 59.8 59.9 59.9 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.7 60.7 60.8 60.8 60.9 61.0 61.0 61.1 61.2 61.2 61.3 61.4 61.4 61.5 61.6 61.6 61.7 61.8 61.8 61.9 62.0 62.0 62.1 62.2 62.2 62.3 62.4 62.4 62.5 62.5 62.6 62.7 62.7 62.8 62.9 62.9 63.0 63.1 63.1 63.2 63.3 63.3 63.4 63.5 63.5 63.6 63.7 63.7 63.8 63.9 63.9 64.0 64.1 64.1 64.2 64.2 64.3 64.4 64.4 64.5 64.6 64.6 64.7 64.8 64.8 64.9 65.0 65.0 65.1 65.2 65.2 65.3 65.4 65.4 65.5 65.6 65.6 65.7 65.8 65.8 65.9 65.9 66.0 66.1 66.1 66.2 66.3 66.3 66.4 66.5 66.5 66.6 66.7 66.7 66.8 66.9 66.9 67.0 67.1 67.1 67.2 67.3 67.3 67.4 67.5 67.5 67.6 67.6 67.7 67.8 67.8 67.9 68.0 68.0 68.1 68.2 68.2 68.3 68.4 68.4 68.5 68.6 68.6 68.7 68.8 68.8 68.9 69.0 69.0 69.1 69.2 69.2 69.3 69.3 69.4 69.5 69.5 69.6 69.7 69.7 69.8 69.9 69.9 70.0 70.1 70.1 70.2 70.3 70.3 70.4 70.5 70.5 70.6 70.7 70.7 70.8 70.8 70.9 71.0 71.0 71.1 71.2 71.2 71.3 71.4 71.4 71.5 71.6 71.6 71.7 71.8 71.8 71.9 72.0 72.0 72.1 72.2 72.2 72.3 72.4 72.4 72.5 72.5 72.6 72.7 72.7 72.8 72.9 72.9 73.0 73.1 73.1 73.2 73.3 73.3 73.4 73.5 73.5 73.6 73.7 73.7 73.8 73.9 73.9 74.0 74.1 74.1 74.2 74.2 74.3 74.4 74.4 74.5 74.6 74.6 74.7 74.8 74.8 74.9 75.0 75.0 75.1 75.2 75.2 75.3 75.4 75.4 75.5 75.6 75.6 75.7 75.8 75.8 75.9 75.9 76.0 76.1 76.1 76.2 76.3 76.3 76.4 76.5 76.5 76.6 76.7 76.7 76.8 76.9 76.9 77.0 77.1 77.1 77.2 77.3 77.3 77.4 77.5 77.5 77.6 77.6 77.7 77.8 77.8 77.9 78.0 78.0 78.1 78.2 78.2 78.3 78.4 78.4 78.5 78.6 78.6 78.7 78.8 78.8 78.9 79.0 79.0 79.1 79.2 79.2 79.3 79.3 79.4 79.5 79.5 79.6 79.7 79.7 79.8 79.9 79.9 80.0 80.1 80.1 80.2 80.3 80.3 80.4 80.5 80.5 80.6 80.7 80.7 80.8 80.8 80.9 81.0 81.0 81.1 81.2 81.2 81.3 81.4 81.4 81.5 81.6 81.6 81.7 81.8 81.8 81.9 82.0 82.0 82.1 82.2 82.2 82.3 82.4 82.4 82.5 82.5 82.6 82.7 82.7 82.8 82.9 82.9 83.0 83.1 83.1 83.2 83.3 83.3 83.4 83.5 83.5 83.6 83.7 83.7 83.8 83.9 83.9 84.0 84.1 84.1 84.2 84.2 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.8 84.8 84.9 85.0 85.0 85.1 85.2 85.2 85.3 85.4 85.4 85.5 85.6 85.6 85.7 85.8 85.8 85.9 85.9 86.0 86.1 86.1 86.2 86.3 86.3 86.4 86.5 86.5 86.6 86.7 86.7 86.8 86.9 86.9 87.0 87.1 87.1 87.2 87.3 87.3 87.4 87.5 87.5 87.6 87.6 87.7 87.8 87.8 87.9 88.0 88.0 88.1 88.2 88.2 88.3 88.4 88.4 88.5 88.6 88.6 88.7 88.8 88.8 88.9 89.0 89.0 89.1 89.2 89.2 89.3 89.3 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.9 89.9 90.0 90.1 90.1 90.2 90.3 90.3 90.4 90.5 90.5 90.6 90.7 90.7 90.8 90.8 90.9 91.0 91.0 91.1 91.2 91.2 91.3 91.4 91.4 91.5 91.6 91.6 91.7 91.8 91.8 91.9 92.0 92.0 92.1 92.2 92.2 92.3 92.4 92.4 92.5 92.5 92.6 92.7 92.7 92.8 92.9 92.9 93.0 93.1 93.1 93.2 93.3 93.3 93.4 93.5 93.5 93.6 93.7 93.7 93.8 93.9 93.9 94.0 94.1 94.1 94.2 94.2 94.3 94.4 94.4 94.5 94.6 94.6 94.7 94.8 94.8 94.9 95.0 95.0 95.1 95.2 95.2 95.3 95.4 95.4 95.5 95.6 95.6 95.7 95.8 95.8 95.9 95.9 96.0 96.1 96.1 96.2 96.3 96.3 96.4 96.5 96.5 96.6 96.7 96.7 96.8 96.9 96.9 97.0 97.1 97.1 97.2 97.3 97.3 97.4 97.5 97.5 97.6 97.6 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.4 98.4 98.5 98.6 98.6 98.7 98.8 98.8 98.9 99.0 99.0 99.1 99.2 99.2 99.3 99.3 99.4 99.5 99.5 99.6 99.7 99.7 99.8 99.9 99.9 -found 88 predictions from path traversal Error with prediction: GlimmerHMM lend_intergenic: 85465, rend_intergenic: 85462 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 229434, rend_intergenic: 229431 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13416, rend_intergenic: 8537 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17309, rend_intergenic: 14642 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22222, rend_intergenic: 19950 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25171, rend_intergenic: 23806 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30617, rend_intergenic: 29136 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 33072, rend_intergenic: 30636 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39751, rend_intergenic: 33110 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53378, rend_intergenic: 41707 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61605, rend_intergenic: 53734 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 68613, rend_intergenic: 64580 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86510, rend_intergenic: 81554 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88460, rend_intergenic: 86536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92292, rend_intergenic: 91053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93933, rend_intergenic: 92730 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 116860, rend_intergenic: 97331 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121271, rend_intergenic: 116890 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148198, rend_intergenic: 122579 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149310, rend_intergenic: 148490 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 161511, rend_intergenic: 151239 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168836, rend_intergenic: 166082 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187185, rend_intergenic: 169622 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187669, rend_intergenic: 187215 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207022, rend_intergenic: 187711 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222590, rend_intergenic: 207041 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 237879, rend_intergenic: 224067 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249242, rend_intergenic: 238237 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254130, rend_intergenic: 249514 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 265670, rend_intergenic: 259457 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 273695, rend_intergenic: 266779 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 287988, rend_intergenic: 279305 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 289491, rend_intergenic: 288004 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 13 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 10644 -exon list size: 15 building trellis 5.9 11.8 17.6 23.5 29.4 35.3 41.2 47.1 52.9 58.8 64.7 70.6 76.5 82.4 88.2 94.1 -found 2 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support