-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_12079116-12257590

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_42134-T1
Valid prediction for Augustus_model.g28235.t1
Valid prediction for GlimmerHMM_glimmerT_42129-T1
Valid prediction for snap_scaffold_17-snap.2471-T1
Valid prediction for GlimmerHMM_glimmerT_42133-T1
Valid prediction for snap_scaffold_17-snap.2486-T1
Valid prediction for snap_scaffold_17-snap.2487-T1
Valid prediction for HiQ_model.g28233.t1
Couldn't classify 88851, 89001
Couldn't classify 90389, 90456
Sorry, prediction pasa_asmbl_18562.p2 fails validation.
(GGG)	 CA	88851-89001	GT	AGG
(CTC)	 AG	89113-89172	GT	AGG
(CTA)	 AG	89482-89586	GT	AGG
(GTC)	 AG	90389-90456	AT	AGA
-recovered pasa_asmbl_18562.p2, internal, 89113, 89172
-recovered pasa_asmbl_18562.p2, internal, 89482, 89586
Valid prediction for CodingQuarry_transcript_22162-T1
Valid prediction for HiQ_model.g28225.t1
Valid prediction for GlimmerHMM_glimmerT_42130-T1
Valid prediction for GeneMark_model.72700_t
Valid prediction for CodingQuarry_transcript_22152-T1
Valid prediction for pasa_asmbl_18401.p1
Valid prediction for snap_scaffold_17-snap.2476-T1
Valid prediction for snap_scaffold_17-snap.2479-T1
Valid prediction for GeneMark_model.72697_t
Valid prediction for GlimmerHMM_glimmerT_42122-T1
Valid prediction for GlimmerHMM_glimmerT_42120-T1
Valid prediction for Augustus_model.g28229.t1
Valid prediction for GeneMark_model.72713_t
Couldn't classify 58255, 58313
Sorry, prediction pasa_asmbl_18388.p1 fails validation.
(ATG)	 AA	53950-54142	GT	ATG
(CTG)	 AG	56325-56454	GT	AAG
(TAG)	 AG	56700-56860	GT	AGG
(CTG)	 AG	56980-57032	GT	TTG
(CCT)	 AG	57667-57793	GT	AGG
(ACA)	 AG	58255-58313	GA	AGG
-recovered pasa_asmbl_18388.p1, initial, 53950, 54142
-recovered pasa_asmbl_18388.p1, internal, 56325, 56454
-recovered pasa_asmbl_18388.p1, internal, 56700, 56860
-recovered pasa_asmbl_18388.p1, internal, 56980, 57032
-recovered pasa_asmbl_18388.p1, internal, 57667, 57793
Valid prediction for HiQ_model.g28234.t1
Valid prediction for GeneMark_model.72715_t
Valid prediction for Augustus_model.g28236.t1
Valid prediction for CodingQuarry_transcript_22158-T1
Valid prediction for GlimmerHMM_glimmerT_42139-T1
Valid prediction for GlimmerHMM_glimmerT_42135-T1
Valid prediction for GeneMark_model.72695_t
Valid prediction for snap_scaffold_17-snap.2468-T1
Valid prediction for GlimmerHMM_glimmerT_42126-T1
Valid prediction for GlimmerHMM_glimmerT_42123-T1
Valid prediction for CodingQuarry_transcript_22161-T1
Valid prediction for pasa_asmbl_18383.p1
Valid prediction for snap_scaffold_17-snap.2501-T1
Valid prediction for HiQ_model.g28241.t1
Valid prediction for GeneMark_model.72709_t
Valid prediction for CodingQuarry_transcript_22159-T1
Valid prediction for GeneMark_model.72710_t
Valid prediction for pasa_asmbl_18397.p1
Valid prediction for snap_scaffold_17-snap.2490-T1
Couldn't classify 88074, 88145
Sorry, prediction pasa_asmbl_18391.p2 fails validation.
(ATG)	 AG	83087-83135	GT	GGG
(AAG)	 AG	85061-85189	GT	AGG
(GGT)	 AG	86590-86669	GT	CGG
(GGG)	 AG	88074-88145	GT	AGG
-recovered pasa_asmbl_18391.p2, initial, 83087, 83135
-recovered pasa_asmbl_18391.p2, internal, 83087, 83135
-recovered pasa_asmbl_18391.p2, internal, 85061, 85189
-recovered pasa_asmbl_18391.p2, internal, 86590, 86669
-recovered pasa_asmbl_18391.p2, internal, 88074, 88145
Valid prediction for snap_scaffold_17-snap.2496-T1
Valid prediction for GeneMark_model.72703_t
Valid prediction for GlimmerHMM_glimmerT_42119-T1
Valid prediction for CodingQuarry_transcript_22155-T1
Valid prediction for snap_scaffold_17-snap.2475-T1
Valid prediction for CodingQuarry_transcript_22157-T1
Valid prediction for Augustus_model.g28224.t1
Valid prediction for GeneMark_model.72705_t
Couldn't classify 42538, 42643
Sorry, prediction pasa_asmbl_18385.p1 fails validation.
(TTT)	 AT	42538-42643	GT	ACG
(AAA)	 AG	43099-43270	GT	AGG
(GTA)	 AG	43412-43533	GT	AGG
(CCT)	 AG	44815-44947	GT	AGG
(AAC)	 AG	45177-45283	GT	TGG
(ACT)	 AG	45436-45595	GT	AGG
(ACG)	 AG	46092-46218	AA	GAA
-recovered pasa_asmbl_18385.p1, terminal, 46092, 46218
-recovered pasa_asmbl_18385.p1, internal, 43099, 43270
-recovered pasa_asmbl_18385.p1, internal, 43412, 43533
-recovered pasa_asmbl_18385.p1, internal, 44815, 44947
-recovered pasa_asmbl_18385.p1, internal, 45177, 45283
-recovered pasa_asmbl_18385.p1, internal, 45436, 45595
Valid prediction for snap_scaffold_17-snap.2473-T1
Valid prediction for Augustus_model.g28232.t1
Valid prediction for GlimmerHMM_glimmerT_42138-T1
Valid prediction for snap_scaffold_17-snap.2502-T1
Valid prediction for snap_scaffold_17-snap.2477-T1
Couldn't classify 127654, 127977
Sorry, prediction pasa_asmbl_18404.p2 fails validation.
(ATG)	 GC	127654-127977	GG	GGG
Valid prediction for Augustus_model.g28242.t1
Valid prediction for GeneMark_model.72698_t
Valid prediction for Augustus_model.g28231.t1
Valid prediction for snap_scaffold_17-snap.2474-T1
Valid prediction for GeneMark_model.72685_t
Valid prediction for pasa_asmbl_18381.p1
Valid prediction for GlimmerHMM_glimmerT_42125-T1
Valid prediction for GeneMark_model.72693_t
Valid prediction for CodingQuarry_transcript_22154-T1
Valid prediction for HiQ_model.g28227.t1
Valid prediction for CodingQuarry_transcript_22153-T1
Valid prediction for snap_scaffold_17-snap.2465-T1
Valid prediction for GeneMark_model.72689_t
Valid prediction for pasa_asmbl_18387.p1
Valid prediction for pasa_asmbl_18384.p1
Valid prediction for HiQ_model.g28238.t1
Valid prediction for snap_scaffold_17-snap.2472-T1
Valid prediction for CodingQuarry_transcript_22165-T1
Valid prediction for GeneMark_model.72719_t
Valid prediction for GlimmerHMM_glimmerT_42128-T1
Valid prediction for CodingQuarry_transcript_22163-T1
Valid prediction for GlimmerHMM_glimmerT_42132-T1
Valid prediction for GlimmerHMM_glimmerT_42136-T1
Valid prediction for Augustus_model.g28228.t1
Couldn't classify 58757, 58991
Sorry, prediction pasa_asmbl_18389.p1 fails validation.
(CCC)	 CT	58757-58991	GT	AGG
(TCG)	 AG	59192-59422	GC	AGG
(GGA)	 AG	59918-60127	GT	AGG
(GTA)	 AG	61093-62771	CT	GAC
-recovered pasa_asmbl_18389.p1, terminal, 61093, 62771
-recovered pasa_asmbl_18389.p1, internal, 59192, 59422
-recovered pasa_asmbl_18389.p1, internal, 59918, 60127
Valid prediction for GlimmerHMM_glimmerT_42124-T1
Valid prediction for GeneMark_model.72721_t
Valid prediction for pasa_asmbl_18600.p1
Valid prediction for GlimmerHMM_glimmerT_42127-T1
Valid prediction for snap_scaffold_17-snap.2491-T1
Valid prediction for Augustus_model.g28237.t1
Couldn't classify 96171, 96235
Sorry, prediction pasa_asmbl_18396.p1 fails validation.
(GCT)	 CT	96171-96235	GT	AGG
(GAT)	 AG	98160-98333	GT	AGG
(GAC)	 AG	98647-98764	GT	AGG
(AGT)	 AG	99264-99382	GT	AGG
(TTG)	 AG	99886-99943	GT	ATG
(AAA)	 AG	100121-100171	GT	TGG
(CCT)	 AG	100544-100636	GT	AAG
(GAC)	 AG	101938-102066	GT	AGG
(TCG)	 AG	102401-102507	GT	TGG
(GAT)	 AG	102682-102835	GT	ACG
(GAA)	 AG	103205-103363	GG	GAG
-recovered pasa_asmbl_18396.p1, terminal, 99264, 99382
-recovered pasa_asmbl_18396.p1, terminal, 103205, 103363
-recovered pasa_asmbl_18396.p1, internal, 98160, 98333
-recovered pasa_asmbl_18396.p1, internal, 98647, 98764
-recovered pasa_asmbl_18396.p1, internal, 99264, 99382
-recovered pasa_asmbl_18396.p1, internal, 99886, 99943
-recovered pasa_asmbl_18396.p1, internal, 100121, 100171
-recovered pasa_asmbl_18396.p1, internal, 100544, 100636
-recovered pasa_asmbl_18396.p1, internal, 101938, 102066
-recovered pasa_asmbl_18396.p1, internal, 102401, 102507
-recovered pasa_asmbl_18396.p1, internal, 102682, 102835
Valid prediction for GeneMark_model.72708_t
Valid prediction for Augustus_model.g28239.t1
Valid prediction for snap_scaffold_17-snap.2504-T1
Valid prediction for snap_scaffold_17-snap.2493-T1
Valid prediction for CodingQuarry_transcript_22160-T1
Valid prediction for HiQ_model.g28230.t1
Valid prediction for snap_scaffold_17-snap.2466-T1
Valid prediction for GeneMark_model.72707_t
Valid prediction for GlimmerHMM_glimmerT_42137-T1
Valid prediction for snap_scaffold_17-snap.2480-T1
Valid prediction for snap_scaffold_17-snap.2485-T1
Valid prediction for CodingQuarry_transcript_22156-T1
Valid prediction for snap_scaffold_17-snap.2469-T1
Valid prediction for CodingQuarry_transcript_22151-T1
Valid prediction for GeneMark_model.72691_t
Valid prediction for CodingQuarry_transcript_22164-T1
Valid prediction for snap_scaffold_17-snap.2470-T1
Valid prediction for Augustus_model.g28240.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.72718_t
Valid prediction for GeneMark_model.72704_t
Valid prediction for snap_scaffold_17-snap.2489-T1
Valid prediction for snap_scaffold_17-snap.2494-T1
Valid prediction for snap_scaffold_17-snap.2498-T1
Valid prediction for snap_scaffold_17-snap.2482-T1
Valid prediction for GlimmerHMM_glimmerT_42145-T1
Valid prediction for GlimmerHMM_glimmerT_42147-T1
Valid prediction for Augustus_model.g28243.t1
Valid prediction for Augustus_model.g28244.t1
Valid prediction for HiQ_model.g28226.t1
Valid prediction for HiQ_model.g28245.t1
Valid prediction for snap_scaffold_17-snap.2503-T1
Valid prediction for CodingQuarry_transcript_22168-T1
Valid prediction for GeneMark_model.72692_t
Valid prediction for Augustus_model.g28246.t1
Valid prediction for GeneMark_model.72711_t
Valid prediction for GeneMark_model.72720_t
Valid prediction for GlimmerHMM_glimmerT_42131-T1
Valid prediction for GeneMark_model.72688_t
Valid prediction for snap_scaffold_17-snap.2492-T1
Valid prediction for snap_scaffold_17-snap.2497-T1
Valid prediction for pasa_asmbl_19362.p1
Valid prediction for CodingQuarry_transcript_22166-T1
Valid prediction for GeneMark_model.72706_t
Valid prediction for GeneMark_model.72690_t
Valid prediction for snap_scaffold_17-snap.2481-T1
Valid prediction for GlimmerHMM_glimmerT_42144-T1
Valid prediction for snap_scaffold_17-snap.2488-T1
Valid prediction for GeneMark_model.72712_t
Valid prediction for GeneMark_model.72696_t
Valid prediction for GeneMark_model.72724_t
Valid prediction for GeneMark_model.72702_t
Valid prediction for GlimmerHMM_glimmerT_42142-T1
Couldn't classify 37865, 38153
Sorry, prediction pasa_asmbl_19367.p1 fails validation.
(ATG)	 GA	32536-32692	GT	AGG
(GCT)	 AG	32840-32958	GT	AGG
(AAC)	 AG	33346-33453	GT	AGG
(GCC)	 AG	34117-34230	GT	AGG
(GTG)	 AG	34602-34778	GT	TGG
(TGC)	 AG	35926-36061	GT	AGG
(AGG)	 AG	36260-36465	GT	AGG
(GTG)	 AG	36751-36900	GT	AGG
(GCG)	 AG	37562-37683	GT	GGG
(GTA)	 AG	37865-38153	GG	GGG
-recovered pasa_asmbl_19367.p1, initial, 32536, 32692
-recovered pasa_asmbl_19367.p1, internal, 32840, 32958
-recovered pasa_asmbl_19367.p1, internal, 33346, 33453
-recovered pasa_asmbl_19367.p1, internal, 34117, 34230
-recovered pasa_asmbl_19367.p1, internal, 34602, 34778
-recovered pasa_asmbl_19367.p1, internal, 35926, 36061
-recovered pasa_asmbl_19367.p1, internal, 36260, 36465
-recovered pasa_asmbl_19367.p1, internal, 36751, 36900
-recovered pasa_asmbl_19367.p1, internal, 37562, 37683
Valid prediction for GeneMark_model.72717_t
Valid prediction for GeneMark_model.72694_t
Valid prediction for GeneMark_model.72684_t
Valid prediction for snap_scaffold_17-snap.2500-T1
Valid prediction for GlimmerHMM_glimmerT_42146-T1
Valid prediction for GeneMark_model.72687_t
Valid prediction for snap_scaffold_17-snap.2464-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for snap_scaffold_17-snap.2505-T1
Couldn't classify 41418, 41537
Sorry, prediction pasa_asmbl_19537.p1 fails validation.
(GAA)	 TG	41418-41537	GT	AGG
(CAC)	 AG	41644-41940	GA	AGG
-recovered pasa_asmbl_19537.p1, terminal, 41644, 41940
Valid prediction for Augustus_model.g28247.t1
Valid prediction for snap_scaffold_17-snap.2483-T1
Valid prediction for GeneMark_model.72686_t
Valid prediction for snap_scaffold_17-snap.2506-T1
Valid prediction for GeneMark_model.72714_t
Valid prediction for GeneMark_model.72699_t
Valid prediction for snap_scaffold_17-snap.2484-T1
Valid prediction for GlimmerHMM_glimmerT_42141-T1
Couldn't classify 42740, 42823
Sorry, prediction pasa_asmbl_19364.p1 fails validation.
(GCC)	 AA	42740-42823	GT	AGG
(GTA)	 AG	43214-43315	GT	AGG
(GTG)	 AG	43495-43551	GT	AGG
(CTG)	 AG	43645-43711	GT	AGG
(CTG)	 AG	43800-43894	GT	ACG
(ATG)	 AG	44417-44488	GT	TGG
(TTC)	 AG	44970-45061	GT	AGG
(GAA)	 AG	45727-45802	GT	AGG
(GAA)	 AG	45970-46089	TT	GAT
-recovered pasa_asmbl_19364.p1, initial, 44417, 44488
-recovered pasa_asmbl_19364.p1, terminal, 45970, 46089
-recovered pasa_asmbl_19364.p1, internal, 43214, 43315
-recovered pasa_asmbl_19364.p1, internal, 43495, 43551
-recovered pasa_asmbl_19364.p1, internal, 43645, 43711
-recovered pasa_asmbl_19364.p1, internal, 43800, 43894
-recovered pasa_asmbl_19364.p1, internal, 44417, 44488
-recovered pasa_asmbl_19364.p1, internal, 44970, 45061
-recovered pasa_asmbl_19364.p1, internal, 45727, 45802
Valid prediction for GeneMark_model.72722_t
Valid prediction for snap_scaffold_17-snap.2478-T1
Valid prediction for GeneMark_model.72716_t
Valid prediction for pasa_asmbl_19369.p1
Valid prediction for CodingQuarry_transcript_22169-T1
Valid prediction for GlimmerHMM_glimmerT_42140-T1
Valid prediction for snap_scaffold_17-snap.2499-T1
Valid prediction for GlimmerHMM_glimmerT_42121-T1
Valid prediction for GlimmerHMM_glimmerT_42143-T1
Valid prediction for snap_scaffold_17-snap.2467-T1
Valid prediction for snap_scaffold_17-snap.2495-T1
Valid prediction for GlimmerHMM_glimmerT_42118-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 59436, rend_intergenic: 56691  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61225, rend_intergenic: 59857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90858, rend_intergenic: 70162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114060, rend_intergenic: 109179  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128669, rend_intergenic: 125281  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145115, rend_intergenic: 140002  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162369, rend_intergenic: 158749  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164522, rend_intergenic: 162970  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167625, rend_intergenic: 166955  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 178475
-exon list size: 697


building trellis

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45.8    
45.9    
46.1    
46.2    
46.4    
46.5    
46.6    
46.8    
46.9    
47.1    
47.2    
47.4    
47.5    
47.6    
47.8    
47.9    
48.1    
48.2    
48.4    
48.5    
48.6    
48.8    
48.9    
49.1    
49.2    
49.4    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.6    
50.8    
50.9    
51.1    
51.2    
51.4    
51.5    
51.6    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.6    
52.8    
52.9    
53.1    
53.2    
53.4    
53.5    
53.6    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.6    
54.8    
54.9    
55.1    
55.2    
55.4    
55.5    
55.7    
55.8    
55.9    
56.1    
56.2    
56.4    
56.5    
56.7    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.7    
57.8    
57.9    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.7    
61.8    
61.9    
62.1    
62.2    
62.4    
62.5    
62.7    
62.8    
62.9    
63.1    
63.2    
63.4    
63.5    
63.7    
63.8    
63.9    
64.1    
64.2    
64.4    
64.5    
64.7    
64.8    
64.9    
65.1    
65.2    
65.4    
65.5    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.2    
68.4    
68.5    
68.7    
68.8    
69.0    
69.1    
69.2    
69.4    
69.5    
69.7    
69.8    
70.0    
70.1    
70.2    
70.4    
70.5    
70.7    
70.8    
71.0    
71.1    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.2    
74.4    
74.5    
74.7    
74.8    
75.0    
75.1    
75.3    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.5    
77.7    
77.8    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.5    
79.7    
79.8    
80.0    
80.1    
80.3    
80.4    
80.5    
80.7    
80.8    
81.0    
81.1    
81.3    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.3    
82.4    
82.5    
82.7    
82.8    
83.0    
83.1    
83.3    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.3    
84.4    
84.5    
84.7    
84.8    
85.0    
85.1    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.6    
87.7    
87.8    
88.0    
88.1    
88.3    
88.4    
88.6    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.8    
90.0    
90.1    
90.3    
90.4    
90.6    
90.7    
90.8    
91.0    
91.1    
91.3    
91.4    
91.6    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.8    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.1    
97.3    
97.4    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.6    
98.7    
98.9    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 31 predictions from path traversal
Error with prediction: snap lend_intergenic: 59436, rend_intergenic: 56691  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61225, rend_intergenic: 59857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90858, rend_intergenic: 70162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114060, rend_intergenic: 109179  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128669, rend_intergenic: 125281  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145115, rend_intergenic: 140002  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162369, rend_intergenic: 158749  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164522, rend_intergenic: 162970  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167625, rend_intergenic: 166955  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support