-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_10697924-10866559

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_17-snap.2164-T1
Valid prediction for GeneMark_model.72315_t
Valid prediction for GlimmerHMM_glimmerT_41941-T1
Valid prediction for GeneMark_model.72296_t
Valid prediction for GeneMark_model.72329_t
Valid prediction for GlimmerHMM_glimmerT_41950-T1
Valid prediction for GlimmerHMM_glimmerT_41933-T1
Valid prediction for snap_scaffold_17-snap.2182-T1
Valid prediction for GeneMark_model.72319_t
Valid prediction for Augustus_model.g28123.t1
Valid prediction for GlimmerHMM_glimmerT_41937-T1
Valid prediction for GeneMark_model.72300_t
Valid prediction for GeneMark_model.72302_t
Valid prediction for snap_scaffold_17-snap.2175-T1
Valid prediction for GeneMark_model.72334_t
Valid prediction for snap_scaffold_17-snap.2186-T1
Valid prediction for GlimmerHMM_glimmerT_41945-T1
Valid prediction for GeneMark_model.72317_t
Valid prediction for snap_scaffold_17-snap.2165-T1
Valid prediction for snap_scaffold_17-snap.2199-T1
Valid prediction for GeneMark_model.72326_t
Valid prediction for GlimmerHMM_glimmerT_41932-T1
Valid prediction for Augustus_model.g28130.t1
Valid prediction for GeneMark_model.72292_t
Valid prediction for snap_scaffold_17-snap.2168-T1
Valid prediction for GlimmerHMM_glimmerT_41930-T1
Valid prediction for GlimmerHMM_glimmerT_41939-T1
Valid prediction for GeneMark_model.72332_t
Valid prediction for snap_scaffold_17-snap.2180-T1
Valid prediction for GeneMark_model.72321_t
Valid prediction for GeneMark_model.72309_t
Valid prediction for GeneMark_model.72310_t
Valid prediction for GeneMark_model.72313_t
Valid prediction for GeneMark_model.72294_t
Valid prediction for snap_scaffold_17-snap.2195-T1
Valid prediction for snap_scaffold_17-snap.2167-T1
Valid prediction for snap_scaffold_17-snap.2173-T1
Valid prediction for GlimmerHMM_glimmerT_41929-T1
Valid prediction for GeneMark_model.72330_t
Valid prediction for snap_scaffold_17-snap.2171-T1
Valid prediction for snap_scaffold_17-snap.2160-T1
Valid prediction for GlimmerHMM_glimmerT_41943-T1
Valid prediction for GeneMark_model.72307_t
Valid prediction for GeneMark_model.72305_t
Valid prediction for GlimmerHMM_glimmerT_41949-T1
Valid prediction for snap_scaffold_17-snap.2178-T1
Valid prediction for snap_scaffold_17-snap.2198-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GeneMark_model.72311_t
Valid prediction for snap_scaffold_17-snap.2194-T1
Valid prediction for GeneMark_model.72299_t
Valid prediction for GeneMark_model.72336_t
Valid prediction for GlimmerHMM_glimmerT_41942-T1
Valid prediction for GlimmerHMM_glimmerT_41927-T1
Valid prediction for GeneMark_model.72338_t
Valid prediction for snap_scaffold_17-snap.2191-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_41948-T1
Valid prediction for GlimmerHMM_glimmerT_41935-T1
Valid prediction for snap_scaffold_17-snap.2162-T1
Valid prediction for GlimmerHMM_glimmerT_41928-T1
Valid prediction for snap_scaffold_17-snap.2170-T1
Valid prediction for GeneMark_model.72324_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_41951-T1
Valid prediction for snap_scaffold_17-snap.2159-T1
Valid prediction for snap_scaffold_17-snap.2169-T1
Valid prediction for GeneMark_model.72333_t
Valid prediction for GeneMark_model.72339_t
Valid prediction for snap_scaffold_17-snap.2190-T1
Valid prediction for GeneMark_model.72306_t
Valid prediction for GeneMark_model.72318_t
Valid prediction for snap_scaffold_17-snap.2179-T1
Valid prediction for Augustus_model.g28124.t1
Valid prediction for GeneMark_model.72289_t
Valid prediction for GeneMark_model.72320_t
Valid prediction for GeneMark_model.72340_t
Valid prediction for GeneMark_model.72316_t
Valid prediction for GlimmerHMM_glimmerT_41934-T1
Valid prediction for GeneMark_model.72327_t
Valid prediction for GeneMark_model.72295_t
Valid prediction for GeneMark_model.72290_t
Valid prediction for snap_scaffold_17-snap.2185-T1
Valid prediction for GlimmerHMM_glimmerT_41938-T1
Valid prediction for GeneMark_model.72328_t
Valid prediction for GeneMark_model.72312_t
Valid prediction for Augustus_model.g28128.t1
Valid prediction for snap_scaffold_17-snap.2174-T1
Valid prediction for GlimmerHMM_glimmerT_41946-T1
Valid prediction for GeneMark_model.72293_t
Valid prediction for GlimmerHMM_glimmerT_41947-T1
Valid prediction for snap_scaffold_17-snap.2188-T1
Valid prediction for GeneMark_model.72291_t
Valid prediction for GeneMark_model.72322_t
Valid prediction for snap_scaffold_17-snap.2163-T1
Valid prediction for GlimmerHMM_glimmerT_41952-T1
Valid prediction for Augustus_model.g28131.t1
Valid prediction for GeneMark_model.72335_t
Valid prediction for snap_scaffold_17-snap.2181-T1
Valid prediction for snap_scaffold_17-snap.2193-T1
Valid prediction for Augustus_model.g28127.t1
Valid prediction for CodingQuarry_transcript_22119-T1
Valid prediction for GlimmerHMM_glimmerT_41931-T1
Valid prediction for Augustus_model.g28125.t1
Valid prediction for GlimmerHMM_glimmerT_41944-T1
Valid prediction for snap_scaffold_17-snap.2177-T1
Valid prediction for HiQ_model.g28126.t1
Valid prediction for snap_scaffold_17-snap.2183-T1
Valid prediction for snap_scaffold_17-snap.2189-T1
Valid prediction for snap_scaffold_17-snap.2192-T1
Valid prediction for GeneMark_model.72303_t
Valid prediction for GlimmerHMM_glimmerT_41936-T1
Valid prediction for snap_scaffold_17-snap.2197-T1
Valid prediction for snap_scaffold_17-snap.2196-T1
Valid prediction for GeneMark_model.72314_t
Valid prediction for GeneMark_model.72304_t
Valid prediction for Augustus_model.g28129.t1
Valid prediction for snap_scaffold_17-snap.2166-T1
Valid prediction for GeneMark_model.72331_t
Valid prediction for snap_scaffold_17-snap.2187-T1
Valid prediction for GeneMark_model.72297_t
Valid prediction for snap_scaffold_17-snap.2161-T1
Valid prediction for snap_scaffold_17-snap.2184-T1
Valid prediction for GeneMark_model.72323_t
Valid prediction for GeneMark_model.72325_t
Valid prediction for GeneMark_model.72301_t
Valid prediction for GeneMark_model.72298_t
Valid prediction for snap_scaffold_17-snap.2176-T1
Valid prediction for GlimmerHMM_glimmerT_41940-T1
Valid prediction for snap_scaffold_17-snap.2172-T1
Valid prediction for GeneMark_model.72337_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8946, rend_intergenic: 6742  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10391, rend_intergenic: 9840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20670, rend_intergenic: 11395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32067, rend_intergenic: 22787  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33748, rend_intergenic: 32203  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40913, rend_intergenic: 35678  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63403, rend_intergenic: 62060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69718, rend_intergenic: 64168  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69857, rend_intergenic: 69791  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75185, rend_intergenic: 69903  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79983, rend_intergenic: 78543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81269, rend_intergenic: 80224  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86416, rend_intergenic: 81310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90318, rend_intergenic: 86611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119570, rend_intergenic: 116977  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128702, rend_intergenic: 126019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131783, rend_intergenic: 128830  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149398, rend_intergenic: 136921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 168636
-exon list size: 635


building trellis

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-found 27 predictions from path traversal
Error with prediction: snap lend_intergenic: 8946, rend_intergenic: 6742  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10391, rend_intergenic: 9840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20670, rend_intergenic: 11395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32067, rend_intergenic: 22787  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33748, rend_intergenic: 32203  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40913, rend_intergenic: 35678  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63403, rend_intergenic: 62060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69718, rend_intergenic: 64168  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69857, rend_intergenic: 69791  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75185, rend_intergenic: 69903  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79983, rend_intergenic: 78543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81269, rend_intergenic: 80224  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86416, rend_intergenic: 81310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90318, rend_intergenic: 86611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119570, rend_intergenic: 116977  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128702, rend_intergenic: 126019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131783, rend_intergenic: 128830  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149398, rend_intergenic: 136921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 9 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 13342
-exon list size: 76


building trellis

1.3    
2.6    
3.8    
5.1    
6.4    
7.7    
9.0    
10.3    
11.5    
12.8    
14.1    
15.4    
16.7    
17.9    
19.2    
20.5    
21.8    
23.1    
24.4    
25.6    
26.9    
28.2    
29.5    
30.8    
32.1    
33.3    
34.6    
35.9    
37.2    
38.5    
39.7    
41.0    
42.3    
43.6    
44.9    
46.2    
47.4    
48.7    
50.0    
51.3    
52.6    
53.8    
55.1    
56.4    
57.7    
59.0    
60.3    
61.5    
62.8    
64.1    
65.4    
66.7    
67.9    
69.2    
70.5    
71.8    
73.1    
74.4    
75.6    
76.9    
78.2    
79.5    
80.8    
82.1    
83.3    
84.6    
85.9    
87.2    
88.5    
89.7    
91.0    
92.3    
93.6    
94.9    
96.2    
97.4    
98.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 13008
-exon list size: 73


building trellis

1.3    
2.7    
4.0    
5.3    
6.7    
8.0    
9.3    
10.7    
12.0    
13.3    
14.7    
16.0    
17.3    
18.7    
20.0    
21.3    
22.7    
24.0    
25.3    
26.7    
28.0    
29.3    
30.7    
32.0    
33.3    
34.7    
36.0    
37.3    
38.7    
40.0    
41.3    
42.7    
44.0    
45.3    
46.7    
48.0    
49.3    
50.7    
52.0    
53.3    
54.7    
56.0    
57.3    
58.7    
60.0    
61.3    
62.7    
64.0    
65.3    
66.7    
68.0    
69.3    
70.7    
72.0    
73.3    
74.7    
76.0    
77.3    
78.7    
80.0    
81.3    
82.7    
84.0    
85.3    
86.7    
88.0    
89.3    
90.7    
92.0    
93.3    
94.7    
96.0    
97.3    
98.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12944
-exon list size: 72


building trellis

1.4    
2.7    
4.1    
5.4    
6.8    
8.1    
9.5    
10.8    
12.2    
13.5    
14.9    
16.2    
17.6    
18.9    
20.3    
21.6    
23.0    
24.3    
25.7    
27.0    
28.4    
29.7    
31.1    
32.4    
33.8    
35.1    
36.5    
37.8    
39.2    
40.5    
41.9    
43.2    
44.6    
45.9    
47.3    
48.6    
50.0    
51.4    
52.7    
54.1    
55.4    
56.8    
58.1    
59.5    
60.8    
62.2    
63.5    
64.9    
66.2    
67.6    
68.9    
70.3    
71.6    
73.0    
74.3    
75.7    
77.0    
78.4    
79.7    
81.1    
82.4    
83.8    
85.1    
86.5    
87.8    
89.2    
90.5    
91.9    
93.2    
94.6    
95.9    
97.3    
98.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12913
-exon list size: 71


building trellis

1.4    
2.7    
4.1    
5.5    
6.8    
8.2    
9.6    
11.0    
12.3    
13.7    
15.1    
16.4    
17.8    
19.2    
20.5    
21.9    
23.3    
24.7    
26.0    
27.4    
28.8    
30.1    
31.5    
32.9    
34.2    
35.6    
37.0    
38.4    
39.7    
41.1    
42.5    
43.8    
45.2    
46.6    
47.9    
49.3    
50.7    
52.1    
53.4    
54.8    
56.2    
57.5    
58.9    
60.3    
61.6    
63.0    
64.4    
65.8    
67.1    
68.5    
69.9    
71.2    
72.6    
74.0    
75.3    
76.7    
78.1    
79.5    
80.8    
82.2    
83.6    
84.9    
86.3    
87.7    
89.0    
90.4    
91.8    
93.2    
94.5    
95.9    
97.3    
98.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12868
-exon list size: 70


building trellis

1.4    
2.8    
4.2    
5.6    
6.9    
8.3    
9.7    
11.1    
12.5    
13.9    
15.3    
16.7    
18.1    
19.4    
20.8    
22.2    
23.6    
25.0    
26.4    
27.8    
29.2    
30.6    
31.9    
33.3    
34.7    
36.1    
37.5    
38.9    
40.3    
41.7    
43.1    
44.4    
45.8    
47.2    
48.6    
50.0    
51.4    
52.8    
54.2    
55.6    
56.9    
58.3    
59.7    
61.1    
62.5    
63.9    
65.3    
66.7    
68.1    
69.4    
70.8    
72.2    
73.6    
75.0    
76.4    
77.8    
79.2    
80.6    
81.9    
83.3    
84.7    
86.1    
87.5    
88.9    
90.3    
91.7    
93.1    
94.4    
95.8    
97.2    
98.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12832
-exon list size: 69


building trellis

1.4    
2.8    
4.2    
5.6    
7.0    
8.5    
9.9    
11.3    
12.7    
14.1    
15.5    
16.9    
18.3    
19.7    
21.1    
22.5    
23.9    
25.4    
26.8    
28.2    
29.6    
31.0    
32.4    
33.8    
35.2    
36.6    
38.0    
39.4    
40.8    
42.3    
43.7    
45.1    
46.5    
47.9    
49.3    
50.7    
52.1    
53.5    
54.9    
56.3    
57.7    
59.2    
60.6    
62.0    
63.4    
64.8    
66.2    
67.6    
69.0    
70.4    
71.8    
73.2    
74.6    
76.1    
77.5    
78.9    
80.3    
81.7    
83.1    
84.5    
85.9    
87.3    
88.7    
90.1    
91.5    
93.0    
94.4    
95.8    
97.2    
98.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12765
-exon list size: 68


building trellis

1.4    
2.9    
4.3    
5.7    
7.1    
8.6    
10.0    
11.4    
12.9    
14.3    
15.7    
17.1    
18.6    
20.0    
21.4    
22.9    
24.3    
25.7    
27.1    
28.6    
30.0    
31.4    
32.9    
34.3    
35.7    
37.1    
38.6    
40.0    
41.4    
42.9    
44.3    
45.7    
47.1    
48.6    
50.0    
51.4    
52.9    
54.3    
55.7    
57.1    
58.6    
60.0    
61.4    
62.9    
64.3    
65.7    
67.1    
68.6    
70.0    
71.4    
72.9    
74.3    
75.7    
77.1    
78.6    
80.0    
81.4    
82.9    
84.3    
85.7    
87.1    
88.6    
90.0    
91.4    
92.9    
94.3    
95.7    
97.1    
98.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12678
-exon list size: 67


building trellis

1.4    
2.9    
4.3    
5.8    
7.2    
8.7    
10.1    
11.6    
13.0    
14.5    
15.9    
17.4    
18.8    
20.3    
21.7    
23.2    
24.6    
26.1    
27.5    
29.0    
30.4    
31.9    
33.3    
34.8    
36.2    
37.7    
39.1    
40.6    
42.0    
43.5    
44.9    
46.4    
47.8    
49.3    
50.7    
52.2    
53.6    
55.1    
56.5    
58.0    
59.4    
60.9    
62.3    
63.8    
65.2    
66.7    
68.1    
69.6    
71.0    
72.5    
73.9    
75.4    
76.8    
78.3    
79.7    
81.2    
82.6    
84.1    
85.5    
87.0    
88.4    
89.9    
91.3    
92.8    
94.2    
95.7    
97.1    
98.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 11985
-exon list size: 61


building trellis

1.6    
3.2    
4.8    
6.3    
7.9    
9.5    
11.1    
12.7    
14.3    
15.9    
17.5    
19.0    
20.6    
22.2    
23.8    
25.4    
27.0    
28.6    
30.2    
31.7    
33.3    
34.9    
36.5    
38.1    
39.7    
41.3    
42.9    
44.4    
46.0    
47.6    
49.2    
50.8    
52.4    
54.0    
55.6    
57.1    
58.7    
60.3    
61.9    
63.5    
65.1    
66.7    
68.3    
69.8    
71.4    
73.0    
74.6    
76.2    
77.8    
79.4    
81.0    
82.5    
84.1    
85.7    
87.3    
88.9    
90.5    
92.1    
93.7    
95.2    
96.8    
98.4    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 11394
-exon list size: 59


building trellis

1.6    
3.3    
4.9    
6.6    
8.2    
9.8    
11.5    
13.1    
14.8    
16.4    
18.0    
19.7    
21.3    
23.0    
24.6    
26.2    
27.9    
29.5    
31.1    
32.8    
34.4    
36.1    
37.7    
39.3    
41.0    
42.6    
44.3    
45.9    
47.5    
49.2    
50.8    
52.5    
54.1    
55.7    
57.4    
59.0    
60.7    
62.3    
63.9    
65.6    
67.2    
68.9    
70.5    
72.1    
73.8    
75.4    
77.0    
78.7    
80.3    
82.0    
83.6    
85.2    
86.9    
88.5    
90.2    
91.8    
93.4    
95.1    
96.7    
98.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10099
-exon list size: 52


building trellis

1.9    
3.7    
5.6    
7.4    
9.3    
11.1    
13.0    
14.8    
16.7    
18.5    
20.4    
22.2    
24.1    
25.9    
27.8    
29.6    
31.5    
33.3    
35.2    
37.0    
38.9    
40.7    
42.6    
44.4    
46.3    
48.1    
50.0    
51.9    
53.7    
55.6    
57.4    
59.3    
61.1    
63.0    
64.8    
66.7    
68.5    
70.4    
72.2    
74.1    
75.9    
77.8    
79.6    
81.5    
83.3    
85.2    
87.0    
88.9    
90.7    
92.6    
94.4    
96.3    
98.1    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10046
-exon list size: 51


building trellis

1.9    
3.8    
5.7    
7.5    
9.4    
11.3    
13.2    
15.1    
17.0    
18.9    
20.8    
22.6    
24.5    
26.4    
28.3    
30.2    
32.1    
34.0    
35.8    
37.7    
39.6    
41.5    
43.4    
45.3    
47.2    
49.1    
50.9    
52.8    
54.7    
56.6    
58.5    
60.4    
62.3    
64.2    
66.0    
67.9    
69.8    
71.7    
73.6    
75.5    
77.4    
79.2    
81.1    
83.0    
84.9    
86.8    
88.7    
90.6    
92.5    
94.3    
96.2    
98.1    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support