-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_17/scaffold_17_10099163-10314953 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_17-snap.2052-T1 Valid prediction for snap_scaffold_17-snap.2023-T1 Valid prediction for Augustus_model.g28073.t1 Valid prediction for GeneMark_model.72113_t Valid prediction for GeneMark_model.72141_t Valid prediction for GeneMark_model.72074_t Valid prediction for Augustus_model.g28086.t1 Valid prediction for GeneMark_model.72135_t Valid prediction for GeneMark_model.72101_t Valid prediction for snap_scaffold_17-snap.2067-T1 Valid prediction for snap_scaffold_17-snap.2047-T1 Valid prediction for GlimmerHMM_glimmerT_41877-T1 Valid prediction for Augustus_model.g28077.t1 Valid prediction for Augustus_model.g28081.t1 Valid prediction for snap_scaffold_17-snap.2046-T1 Valid prediction for GeneMark_model.72072_t Valid prediction for GeneMark_model.72095_t Valid prediction for GeneMark_model.72112_t Valid prediction for GlimmerHMM_glimmerT_41857-T1 Couldn't classify 181130, 181235 Couldn't classify 181940, 181988 Sorry, prediction pasa_asmbl_18611.p1 fails validation. (TGC) TC 181130-181235 GT AGG (GAC) AG 181625-181847 GT TGG (GAG) AG 181940-181988 TC CGT -recovered pasa_asmbl_18611.p1, internal, 181625, 181847 Valid prediction for GeneMark_model.72129_t Valid prediction for snap_scaffold_17-snap.2038-T1 Valid prediction for GlimmerHMM_glimmerT_41881-T1 Valid prediction for Augustus_model.g28082.t1 Couldn't classify 33914, 34011 Sorry, prediction pasa_asmbl_18310.p1 fails validation. (GAG) GA 33914-34011 GT GAG (GTG) AG 34215-34318 GT GGG (GTG) AG 34827-35098 AG GAA -recovered pasa_asmbl_18310.p1, terminal, 34827, 35098 -recovered pasa_asmbl_18310.p1, internal, 34215, 34318 Valid prediction for GeneMark_model.72131_t Valid prediction for GeneMark_model.72078_t Valid prediction for GlimmerHMM_glimmerT_41865-T1 Valid prediction for CodingQuarry_transcript_22115-T1 Valid prediction for GeneMark_model.72137_t Valid prediction for snap_scaffold_17-snap.2060-T1 Valid prediction for GeneMark_model.72146_t Valid prediction for GeneMark_model.72091_t Valid prediction for GeneMark_model.72097_t Valid prediction for snap_scaffold_17-snap.2065-T1 Valid prediction for GlimmerHMM_glimmerT_41854-T1 Valid prediction for GeneMark_model.72076_t Valid prediction for GlimmerHMM_glimmerT_41852-T1 Valid prediction for GeneMark_model.72133_t Valid prediction for GeneMark_model.72128_t Valid prediction for GeneMark_model.72125_t Valid prediction for GeneMark_model.72089_t Valid prediction for GlimmerHMM_glimmerT_41864-T1 Valid prediction for GlimmerHMM_glimmerT_41858-T1 Couldn't classify 21280, 21444 Sorry, prediction pasa_asmbl_18304.p1 fails validation. (TGT) AG 21280-21444 GT AGG (GAG) AG 22585-22806 GT AGG (GTA) AG 22966-23098 GT AGG (CGG) AG 23298-23413 GT AGG (GAC) AG 23520-23603 GT AGG (GTG) AG 23784-23890 GT CGG (TTA) AG 24103-24247 GT AGG (GTG) AG 24393-24479 CA GAC -recovered pasa_asmbl_18304.p1, terminal, 24393, 24479 -recovered pasa_asmbl_18304.p1, internal, 21280, 21444 -recovered pasa_asmbl_18304.p1, internal, 22585, 22806 -recovered pasa_asmbl_18304.p1, internal, 22966, 23098 -recovered pasa_asmbl_18304.p1, internal, 23298, 23413 -recovered pasa_asmbl_18304.p1, internal, 23520, 23603 -recovered pasa_asmbl_18304.p1, internal, 23784, 23890 -recovered pasa_asmbl_18304.p1, internal, 24103, 24247 Couldn't classify 38148, 38328 Sorry, prediction pasa_asmbl_18311.p1 fails validation. (GGC) CA 38148-38328 GT GGG (GCA) AG 38690-38766 GT AGG (ATT) AG 38867-39020 GT AGG (GGG) AG 39165-39296 GT AGG (GGA) AG 39733-39941 CC GAC -recovered pasa_asmbl_18311.p1, terminal, 39733, 39941 -recovered pasa_asmbl_18311.p1, internal, 38690, 38766 -recovered pasa_asmbl_18311.p1, internal, 38867, 39020 -recovered pasa_asmbl_18311.p1, internal, 39165, 39296 Valid prediction for GeneMark_model.72106_t Valid prediction for Augustus_model.g28079.t1 Valid prediction for GlimmerHMM_glimmerT_41860-T1 Valid prediction for GlimmerHMM_glimmerT_41878-T1 Valid prediction for GeneMark_model.72099_t Valid prediction for snap_scaffold_17-snap.2020-T1 Valid prediction for GlimmerHMM_glimmerT_41855-T1 Valid prediction for GeneMark_model.72069_t Valid prediction for snap_scaffold_17-snap.2044-T1 Valid prediction for GeneMark_model.72116_t Valid prediction for GeneMark_model.72114_t Valid prediction for GlimmerHMM_glimmerT_41863-T1 Valid prediction for GeneMark_model.72105_t Valid prediction for snap_scaffold_17-snap.2043-T1 Valid prediction for snap_scaffold_17-snap.2018-T1 Valid prediction for GeneMark_model.72118_t Valid prediction for Augustus_model.g28091.t1 Valid prediction for GeneMark_model.72070_t Valid prediction for GlimmerHMM_glimmerT_41856-T1 Valid prediction for snap_scaffold_17-snap.2028-T1 Valid prediction for GeneMark_model.72110_t Valid prediction for GeneMark_model.72123_t Valid prediction for snap_scaffold_17-snap.2015-T1 Valid prediction for snap_scaffold_17-snap.2026-T1 Valid prediction for snap_scaffold_17-snap.2055-T1 Valid prediction for Augustus_model.g28072.t1 Valid prediction for snap_scaffold_17-snap.2059-T1 Valid prediction for snap_scaffold_17-snap.2036-T1 Valid prediction for snap_scaffold_17-snap.2027-T1 Valid prediction for GlimmerHMM_glimmerT_41853-T1 Valid prediction for snap_scaffold_17-snap.2030-T1 Valid prediction for GeneMark_model.72139_t Valid prediction for Augustus_model.g28078.t1 Valid prediction for snap_scaffold_17-snap.2032-T1 Valid prediction for Augustus_model.g28083.t1 Valid prediction for GeneMark_model.72083_t Valid prediction for GeneMark_model.72081_t Valid prediction for GlimmerHMM_glimmerT_41861-T1 Valid prediction for GeneMark_model.72147_t Valid prediction for snap_scaffold_17-snap.2040-T1 Valid prediction for GeneMark_model.72108_t Valid prediction for Augustus_model.g28093.t1 Valid prediction for snap_scaffold_17-snap.2058-T1 Valid prediction for Augustus_model.g28074.t1 Valid prediction for GeneMark_model.72103_t Valid prediction for GeneMark_model.72086_t Valid prediction for GlimmerHMM_glimmerT_41874-T1 Valid prediction for Augustus_model.g28075.t1 Valid prediction for snap_scaffold_17-snap.2033-T1 Valid prediction for GlimmerHMM_glimmerT_41879-T1 Valid prediction for Augustus_model.g28076.t1 Valid prediction for GlimmerHMM_glimmerT_41850-T1 Valid prediction for GeneMark_model.72121_t Valid prediction for GlimmerHMM_glimmerT_41859-T1 Valid prediction for GeneMark_model.72092_t Valid prediction for GeneMark_model.72087_t Valid prediction for GeneMark_model.72143_t Valid prediction for snap_scaffold_17-snap.2069-T1 Valid prediction for snap_scaffold_17-snap.2054-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_17-snap.2042-T1 Couldn't classify 63419, 63555 Couldn't classify 63700, 63815 Sorry, prediction CodingQuarry_transcript_22114-T1 fails validation. (ATG) CC 63159-63229 GT AAG (TTT) AG 63419-63555 TT ACT (CTC) TC 63700-63815 TG AAT -recovered CodingQuarry_transcript_22114-T1, initial, 63159, 63229 Valid prediction for GlimmerHMM_glimmerT_41868-T1 Valid prediction for Augustus_model.g28085.t1 Valid prediction for Augustus_model.g28088.t1 Valid prediction for snap_scaffold_17-snap.2057-T1 Valid prediction for snap_scaffold_17-snap.2024-T1 Valid prediction for HiQ_model.g28089.t1 Valid prediction for snap_scaffold_17-snap.2048-T1 Valid prediction for GeneMark_model.72068_t Valid prediction for GeneMark_model.72134_t Valid prediction for GeneMark_model.72073_t Valid prediction for GeneMark_model.72084_t Valid prediction for snap_scaffold_17-snap.2025-T1 Valid prediction for Augustus_model.g28087.t1 Valid prediction for snap_scaffold_17-snap.2045-T1 Valid prediction for snap_scaffold_17-snap.2064-T1 Valid prediction for GeneMark_model.72138_t Couldn't classify 185990, 186307 Sorry, prediction pasa_asmbl_18307.p1 fails validation. (CCA) CC 185990-186307 TG CCT Valid prediction for GlimmerHMM_glimmerT_41873-T1 Valid prediction for GeneMark_model.72111_t Valid prediction for GlimmerHMM_glimmerT_41875-T1 Valid prediction for GeneMark_model.72104_t Valid prediction for GlimmerHMM_glimmerT_41876-T1 Valid prediction for snap_scaffold_17-snap.2061-T1 Valid prediction for snap_scaffold_17-snap.2039-T1 Valid prediction for GlimmerHMM_glimmerT_41869-T1 Valid prediction for GlimmerHMM_glimmerT_41862-T1 Valid prediction for Augustus_model.g28092.t1 Valid prediction for GeneMark_model.72096_t Valid prediction for snap_scaffold_17-snap.2016-T1 Valid prediction for snap_scaffold_17-snap.2029-T1 Valid prediction for GeneMark_model.72117_t Valid prediction for GeneMark_model.72088_t Valid prediction for GeneMark_model.72119_t Valid prediction for GeneMark_model.72145_t Valid prediction for GeneMark_model.72098_t Valid prediction for GlimmerHMM_glimmerT_41871-T1 Valid prediction for GeneMark_model.72082_t Valid prediction for GeneMark_model.72075_t Valid prediction for GeneMark_model.72142_t Valid prediction for snap_scaffold_17-snap.2056-T1 Valid prediction for snap_scaffold_17-snap.2037-T1 Valid prediction for Augustus_model.g28080.t1 Valid prediction for GeneMark_model.72124_t Valid prediction for GeneMark_model.72080_t Valid prediction for GlimmerHMM_glimmerT_41872-T1 Valid prediction for GeneMark_model.72071_t Valid prediction for pasa_asmbl_19287.p1 Valid prediction for GeneMark_model.72115_t Valid prediction for snap_scaffold_17-snap.2019-T1 Valid prediction for snap_scaffold_17-snap.2031-T1 Valid prediction for snap_scaffold_17-snap.2066-T1 Couldn't classify 62931, 63229 Sorry, prediction pasa_asmbl_19291.p1 fails validation. (AGC) AC 62931-63229 GT AAG (TTT) AG 63419-63560 GT TGG (GGA) AG 63706-63914 GT AGG (GGT) AG 64020-64719 AA AAA -recovered pasa_asmbl_19291.p1, terminal, 64020, 64719 -recovered pasa_asmbl_19291.p1, internal, 63419, 63560 -recovered pasa_asmbl_19291.p1, internal, 63706, 63914 Valid prediction for snap_scaffold_17-snap.2068-T1 Valid prediction for GeneMark_model.72148_t Valid prediction for snap_scaffold_17-snap.2053-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for GeneMark_model.72077_t Valid prediction for snap_scaffold_17-snap.2051-T1 Valid prediction for GeneMark_model.72085_t Valid prediction for snap_scaffold_17-snap.2041-T1 Valid prediction for snap_scaffold_17-snap.2034-T1 Valid prediction for GlimmerHMM_glimmerT_41866-T1 Valid prediction for snap_scaffold_17-snap.2062-T1 Valid prediction for GeneMark_model.72132_t Valid prediction for GeneMark_model.72107_t Valid prediction for GeneMark_model.72130_t Valid prediction for snap_scaffold_17-snap.2063-T1 Valid prediction for GeneMark_model.72136_t Valid prediction for Augustus_model.g28090.t1 Valid prediction for GeneMark_model.72122_t Valid prediction for snap_scaffold_17-snap.2017-T1 Valid prediction for snap_scaffold_17-snap.2049-T1 Valid prediction for GeneMark_model.72144_t Valid prediction for GeneMark_model.72100_t Valid prediction for GeneMark_model.72093_t Valid prediction for GlimmerHMM_glimmerT_41867-T1 Valid prediction for GlimmerHMM_glimmerT_41870-T1 Valid prediction for GeneMark_model.72079_t Valid prediction for GeneMark_model.72094_t Valid prediction for GlimmerHMM_glimmerT_41851-T1 Couldn't classify 115250, 115328 Couldn't classify 116668, 116809 Sorry, prediction pasa_asmbl_19520.p1 fails validation. (AGT) AG 115250-115328 GT CGG (GAG) AG 115423-115537 GT AAG (GCG) AG 115716-115798 GT AGG (GCT) AG 116182-116245 GT GGG (GAA) AG 116458-116526 GT AGG (AGC) AG 116668-116809 TA AGT -recovered pasa_asmbl_19520.p1, internal, 115250, 115328 -recovered pasa_asmbl_19520.p1, internal, 115423, 115537 -recovered pasa_asmbl_19520.p1, internal, 115716, 115798 -recovered pasa_asmbl_19520.p1, internal, 116182, 116245 -recovered pasa_asmbl_19520.p1, internal, 116458, 116526 Valid prediction for Augustus_model.g28094.t1 Valid prediction for GlimmerHMM_glimmerT_41880-T1 Couldn't classify 113804, 113875 Couldn't classify 114588, 114730 Sorry, prediction pasa_asmbl_19559.p1 fails validation. (GGA) CA 113804-113875 GT AGG (GAC) AG 114017-114217 GT AGG (ATG) AG 114307-114394 GT GGG (GTC) AG 114588-114730 GT AGG -recovered pasa_asmbl_19559.p1, initial, 114307, 114394 -recovered pasa_asmbl_19559.p1, internal, 114017, 114217 -recovered pasa_asmbl_19559.p1, internal, 114307, 114394 -recovered pasa_asmbl_19559.p1, internal, 114588, 114730 Valid prediction for snap_scaffold_17-snap.2070-T1 Valid prediction for snap_scaffold_17-snap.2021-T1 Couldn't classify 90998, 91017 Couldn't classify 95323, 95453 Sorry, prediction pasa_asmbl_19288.p1 fails validation. (ATC) AC 90998-91017 GT GGG (GGG) AG 91105-91207 GT AGG (ACG) AG 91552-91641 GT AGG (GTC) AG 92386-92507 GT CGG (GTC) AG 92809-92930 GT GAG (GAG) AG 93169-93273 GT GGG (GTT) AG 93447-93535 GT GGG (GAG) AG 93981-94064 GT TGG (ATC) AG 94211-94349 GT CGG (ACA) AG 94531-94619 GT AGG (GAG) AG 95005-95104 GT GGG (ACT) AG 95323-95453 GC GAG -recovered pasa_asmbl_19288.p1, internal, 91105, 91207 -recovered pasa_asmbl_19288.p1, internal, 91552, 91641 -recovered pasa_asmbl_19288.p1, internal, 92386, 92507 -recovered pasa_asmbl_19288.p1, internal, 92809, 92930 -recovered pasa_asmbl_19288.p1, internal, 93169, 93273 -recovered pasa_asmbl_19288.p1, internal, 93447, 93535 -recovered pasa_asmbl_19288.p1, internal, 93981, 94064 -recovered pasa_asmbl_19288.p1, internal, 94211, 94349 -recovered pasa_asmbl_19288.p1, internal, 94531, 94619 -recovered pasa_asmbl_19288.p1, internal, 95005, 95104 -recovered pasa_asmbl_19288.p1, internal, 95323, 95453 Valid prediction for GeneMark_model.72127_t Valid prediction for GeneMark_model.72120_t Valid prediction for GeneMark_model.72090_t Valid prediction for GeneMark_model.72109_t Valid prediction for GeneMark_model.72140_t Valid prediction for snap_scaffold_17-snap.2050-T1 Valid prediction for snap_scaffold_17-snap.2022-T1 Couldn't classify 99334, 99381 Sorry, prediction pasa_asmbl_19286.p1 fails validation. (CGA) AC 99334-99381 GT AGG (TTG) AG 99472-99582 GT AGG (ATG) AG 99787-99948 GT AGG (GTG) AG 100429-100500 GT ACG (GTG) AG 100779-100924 GT AGG (GAA) AG 101116-101184 GT AGG (GGA) AG 101275-101387 GT AGG (ACG) AG 101778-102010 CA GAC -recovered pasa_asmbl_19286.p1, initial, 99787, 99948 -recovered pasa_asmbl_19286.p1, terminal, 101778, 102010 -recovered pasa_asmbl_19286.p1, internal, 99472, 99582 -recovered pasa_asmbl_19286.p1, internal, 99787, 99948 -recovered pasa_asmbl_19286.p1, internal, 100429, 100500 -recovered pasa_asmbl_19286.p1, internal, 100779, 100924 -recovered pasa_asmbl_19286.p1, internal, 101116, 101184 -recovered pasa_asmbl_19286.p1, internal, 101275, 101387 Valid prediction for Augustus_model.g28084.t1 Valid prediction for snap_scaffold_17-snap.2035-T1 Couldn't classify 118157, 118231 Sorry, prediction pasa_asmbl_19282.p1 fails validation. (CTG) AG 118157-118231 GT CAG (GCG) AG 118480-118681 GT AGG (CCA) AG 118864-118948 GT CAG (GAG) AG 119031-119148 GT GGG (GCA) AG 119875-120094 GT CGG (GAT) AG 120263-120350 GT GTG (CAT) AG 120562-120645 GT AGG (GAC) AG 120823-120971 GT AGG (AGA) AG 121083-121165 GT AGG (GGT) AG 121453-121535 GT ACG (ACC) AG 121629-121720 GT TGG (GGT) AG 121945-122231 GG GAG add_exon() Sorry, pasa_asmbl_19282.p1 120823-120971-terminal-2 is invalid. -recovered pasa_asmbl_19282.p1, terminal, 120823, 120971 -recovered pasa_asmbl_19282.p1, terminal, 121945, 122231 -recovered pasa_asmbl_19282.p1, internal, 118157, 118231 -recovered pasa_asmbl_19282.p1, internal, 118480, 118681 -recovered pasa_asmbl_19282.p1, internal, 118864, 118948 -recovered pasa_asmbl_19282.p1, internal, 119031, 119148 -recovered pasa_asmbl_19282.p1, internal, 119875, 120094 -recovered pasa_asmbl_19282.p1, internal, 120263, 120350 -recovered pasa_asmbl_19282.p1, internal, 120562, 120645 -recovered pasa_asmbl_19282.p1, internal, 120823, 120971 -recovered pasa_asmbl_19282.p1, internal, 121083, 121165 -recovered pasa_asmbl_19282.p1, internal, 121453, 121535 -recovered pasa_asmbl_19282.p1, internal, 121629, 121720 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 5816, rend_intergenic: 2753 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11390, rend_intergenic: 6357 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17481, rend_intergenic: 11398 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24479, rend_intergenic: 22185 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34885, rend_intergenic: 28520 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41654, rend_intergenic: 36659 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55994, rend_intergenic: 41895 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62203, rend_intergenic: 59000 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66037, rend_intergenic: 63094 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71671, rend_intergenic: 68415 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75786, rend_intergenic: 71696 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82664, rend_intergenic: 80446 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88862, rend_intergenic: 85306 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107585, rend_intergenic: 93561 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120132, rend_intergenic: 112196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120644, rend_intergenic: 120279 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122723, rend_intergenic: 120690 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126602, rend_intergenic: 122833 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170307, rend_intergenic: 157535 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185124, rend_intergenic: 173581 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 196511, rend_intergenic: 191350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200530, rend_intergenic: 196591 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 206667, rend_intergenic: 205017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 212904, rend_intergenic: 210046 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 215791 -exon list size: 984 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.4 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.6 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 52 predictions from path traversal Error with prediction: snap lend_intergenic: 5816, rend_intergenic: 2753 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11390, rend_intergenic: 6357 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17481, rend_intergenic: 11398 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24479, rend_intergenic: 22185 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34885, rend_intergenic: 28520 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41654, rend_intergenic: 36659 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55994, rend_intergenic: 41895 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62203, rend_intergenic: 59000 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66037, rend_intergenic: 63094 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71671, rend_intergenic: 68415 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75786, rend_intergenic: 71696 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82664, rend_intergenic: 80446 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88862, rend_intergenic: 85306 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107585, rend_intergenic: 93561 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120132, rend_intergenic: 112196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120644, rend_intergenic: 120279 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122723, rend_intergenic: 120690 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126602, rend_intergenic: 122833 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170307, rend_intergenic: 157535 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185124, rend_intergenic: 173581 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 196511, rend_intergenic: 191350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200530, rend_intergenic: 196591 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 206667, rend_intergenic: 205017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 212904, rend_intergenic: 210046 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 30 predictions persist after filtering for low support