-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1672

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 38, 130
Sorry, prediction GeneMark_model.109605_t fails validation.
(GAG)	 AG	38-130	GT	TTG
(AGA)	 AG	711-848	GT	AGG
(GTA)	 AG	870-873	AG	AGA
-recovered GeneMark_model.109605_t, terminal, 870, 873
-recovered GeneMark_model.109605_t, internal, 38, 130
-recovered GeneMark_model.109605_t, internal, 711, 848
Couldn't classify 1634, 2064
Sorry, prediction snap_scaffold_1672-snap.1-T1 fails validation.
(ATG)	 AG	737-848	GT	AGG
(AGA)	 AG	1634-2064	GT	AAG
-recovered snap_scaffold_1672-snap.1-T1, initial, 737, 848
-recovered snap_scaffold_1672-snap.1-T1, internal, 737, 848
-recovered snap_scaffold_1672-snap.1-T1, internal, 1634, 2064

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2069
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support