-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1650

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1650-snap.1-T1
Couldn't classify 32, 163
Couldn't classify 1743, 1844
Sorry, prediction GeneMark_model.109584_t fails validation.
(ATA)	 AG	32-163	GT	AGG
(AGC)	 AG	187-252	GT	GAG
(GCT)	 AG	437-445	GT	AAG
(ACC)	 AG	1743-1844	GT	ATG
-recovered GeneMark_model.109584_t, terminal, 437, 445
-recovered GeneMark_model.109584_t, internal, 32, 163
-recovered GeneMark_model.109584_t, internal, 187, 252
-recovered GeneMark_model.109584_t, internal, 437, 445
-recovered GeneMark_model.109584_t, internal, 1743, 1844

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2090
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support