-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1637

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g41771.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 487, 593
Sorry, prediction GeneMark_model.109567_t fails validation.
(GCA)	 AG	487-593	GT	CAG
(GGC)	 AG	677-849	GC	GAG
-recovered GeneMark_model.109567_t, terminal, 677, 849
-recovered GeneMark_model.109567_t, internal, 487, 593
-recovered GeneMark_model.109567_t, internal, 677, 849
Couldn't classify 677, 840
Sorry, prediction snap_scaffold_1637-snap.1-T1 fails validation.
(ATG)	 AC	416-593	GT	CAG
(GGC)	 AG	677-840	GT	ATG
-recovered snap_scaffold_1637-snap.1-T1, initial, 416, 593
-recovered snap_scaffold_1637-snap.1-T1, internal, 677, 840

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2105
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support