-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1627

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1627-snap.1-T1
Couldn't classify 1490, 1777
Sorry, prediction GlimmerHMM_glimmerT_62747-T1 fails validation.
(ATG)	 AA	402-432	GT	TGG
(AGG)	 AG	587-649	GT	GGG
(AGA)	 AG	939-1337	GT	GTG
(TCA)	 AG	1490-1777	GT	AAG
-recovered GlimmerHMM_glimmerT_62747-T1, initial, 402, 432
-recovered GlimmerHMM_glimmerT_62747-T1, internal, 587, 649
-recovered GlimmerHMM_glimmerT_62747-T1, internal, 939, 1337
-recovered GlimmerHMM_glimmerT_62747-T1, internal, 1490, 1777
Valid prediction for Augustus_model.g41768.t1
Couldn't classify 587, 705
Couldn't classify 1112, 1274
Sorry, prediction GeneMark_model.109554_t fails validation.
(AGG)	 AG	587-705	GT	GCG
(AAG)	 AG	1112-1274	GT	CTG
-recovered GeneMark_model.109554_t, internal, 587, 705
-recovered GeneMark_model.109554_t, internal, 1112, 1274

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2126
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support