-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1609

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 508, 531
Sorry, prediction GeneMark_model.109533_t fails validation.
(CGG)	 AG	508-531	GT	GGG
(ACT)	 AG	698-859	GT	GGG
(ACC)	 AG	892-906	GT	AGG
(AGA)	 AG	930-992	GT	GCG
(AAG)	 AG	1029-1274	GT	GAG
(GAA)	 AG	1301-1358	GA	GAG
-recovered GeneMark_model.109533_t, terminal, 1301, 1358
-recovered GeneMark_model.109533_t, internal, 508, 531
-recovered GeneMark_model.109533_t, internal, 698, 859
-recovered GeneMark_model.109533_t, internal, 892, 906
-recovered GeneMark_model.109533_t, internal, 930, 992
-recovered GeneMark_model.109533_t, internal, 1029, 1274

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2151
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support