-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_16/scaffold_16_2597651-2819778

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_16-snap.497-T1
Valid prediction for GeneMark_model.66368_t
Valid prediction for GlimmerHMM_glimmerT_38836-T1
Valid prediction for GlimmerHMM_glimmerT_38817-T1
Valid prediction for GeneMark_model.66391_t
Valid prediction for GeneMark_model.66416_t
Valid prediction for Augustus_model.g26051.t1
Valid prediction for snap_scaffold_16-snap.488-T1
Valid prediction for GeneMark_model.66373_t
Valid prediction for GeneMark_model.66376_t
Valid prediction for snap_scaffold_16-snap.458-T1
Valid prediction for GeneMark_model.66382_t
Valid prediction for Augustus_model.g26046.t1
Couldn't classify 68432, 68507
Couldn't classify 73230, 73293
Sorry, prediction pasa_asmbl_16921.p1 fails validation.
(ACA)	 CC	68432-68507	GT	TGG
(GTC)	 AG	68593-68678	GT	TGG
(GCC)	 AG	69519-69593	GT	AGG
(ATG)	 AG	71569-71765	GT	AGG
(AAG)	 AG	73230-73293	TG	CAT
-recovered pasa_asmbl_16921.p1, initial, 71569, 71765
-recovered pasa_asmbl_16921.p1, internal, 68593, 68678
-recovered pasa_asmbl_16921.p1, internal, 69519, 69593
-recovered pasa_asmbl_16921.p1, internal, 71569, 71765
Valid prediction for snap_scaffold_16-snap.462-T1
Valid prediction for GeneMark_model.66383_t
Valid prediction for Augustus_model.g26065.t1
Valid prediction for GeneMark_model.66355_t
Valid prediction for Augustus_model.g26074.t1
Valid prediction for Augustus_model.g26053.t1
Valid prediction for GeneMark_model.66387_t
Valid prediction for GlimmerHMM_glimmerT_38831-T1
Valid prediction for GlimmerHMM_glimmerT_38847-T1
Valid prediction for snap_scaffold_16-snap.499-T1
Valid prediction for Augustus_model.g26063.t1
Valid prediction for snap_scaffold_16-snap.476-T1
Valid prediction for snap_scaffold_16-snap.455-T1
Valid prediction for GlimmerHMM_glimmerT_38842-T1
Valid prediction for GeneMark_model.66411_t
Valid prediction for Augustus_model.g26055.t1
Valid prediction for snap_scaffold_16-snap.516-T1
Valid prediction for GlimmerHMM_glimmerT_38804-T1
Valid prediction for GeneMark_model.66415_t
Valid prediction for GeneMark_model.66422_t
Valid prediction for GeneMark_model.66393_t
Valid prediction for snap_scaffold_16-snap.470-T1
Valid prediction for GlimmerHMM_glimmerT_38827-T1
Valid prediction for GlimmerHMM_glimmerT_38821-T1
Valid prediction for GlimmerHMM_glimmerT_38844-T1
Valid prediction for snap_scaffold_16-snap.498-T1
Valid prediction for snap_scaffold_16-snap.492-T1
Couldn't classify 100305, 100396
Couldn't classify 104134, 104244
Sorry, prediction pasa_asmbl_17538.p2 fails validation.
(ACC)	 AC	100305-100396	GT	AAG
(GTT)	 AG	102661-102769	GT	ACG
(ACC)	 AG	104134-104244	AA	GCA
-recovered pasa_asmbl_17538.p2, internal, 102661, 102769
Valid prediction for GeneMark_model.66353_t
Valid prediction for GeneMark_model.66409_t
Valid prediction for GlimmerHMM_glimmerT_38813-T1
Valid prediction for GlimmerHMM_glimmerT_38816-T1
Valid prediction for Augustus_model.g26056.t1
Valid prediction for Augustus_model.g26043.t1
Valid prediction for GlimmerHMM_glimmerT_38839-T1
Valid prediction for snap_scaffold_16-snap.474-T1
Valid prediction for GeneMark_model.66406_t
Valid prediction for snap_scaffold_16-snap.510-T1
Valid prediction for GeneMark_model.66395_t
Valid prediction for GeneMark_model.66400_t
Valid prediction for Augustus_model.g26045.t1
Valid prediction for GeneMark_model.66419_t
Valid prediction for Augustus_model.g26069.t1
Valid prediction for snap_scaffold_16-snap.520-T1
Valid prediction for GeneMark_model.66366_t
Valid prediction for GeneMark_model.66402_t
Valid prediction for snap_scaffold_16-snap.506-T1
Valid prediction for snap_scaffold_16-snap.465-T1
Valid prediction for snap_scaffold_16-snap.489-T1
Valid prediction for snap_scaffold_16-snap.473-T1
Valid prediction for snap_scaffold_16-snap.469-T1
Valid prediction for snap_scaffold_16-snap.481-T1
Valid prediction for GeneMark_model.66397_t
Valid prediction for GeneMark_model.66379_t
Valid prediction for snap_scaffold_16-snap.493-T1
Valid prediction for snap_scaffold_16-snap.483-T1
Valid prediction for snap_scaffold_16-snap.464-T1
Valid prediction for GeneMark_model.66360_t
Valid prediction for snap_scaffold_16-snap.461-T1
Valid prediction for GlimmerHMM_glimmerT_38840-T1
Valid prediction for GlimmerHMM_glimmerT_38829-T1
Valid prediction for Augustus_model.g26057.t1
Valid prediction for GeneMark_model.66413_t
Valid prediction for Augustus_model.g26044.t1
Valid prediction for snap_scaffold_16-snap.484-T1
Valid prediction for GlimmerHMM_glimmerT_38834-T1
Valid prediction for GlimmerHMM_glimmerT_38809-T1
Valid prediction for snap_scaffold_16-snap.509-T1
Valid prediction for GlimmerHMM_glimmerT_38819-T1
Valid prediction for GeneMark_model.66420_t
Valid prediction for snap_scaffold_16-snap.504-T1
Valid prediction for GlimmerHMM_glimmerT_38828-T1
Valid prediction for GeneMark_model.66385_t
Valid prediction for Augustus_model.g26054.t1
Valid prediction for snap_scaffold_16-snap.496-T1
Valid prediction for GlimmerHMM_glimmerT_38810-T1
Valid prediction for Augustus_model.g26038.t1
Valid prediction for GeneMark_model.66399_t
Valid prediction for Augustus_model.g26041.t1
Valid prediction for GlimmerHMM_glimmerT_38826-T1
Valid prediction for snap_scaffold_16-snap.502-T1
Valid prediction for snap_scaffold_16-snap.513-T1
Valid prediction for GlimmerHMM_glimmerT_38812-T1
Valid prediction for snap_scaffold_16-snap.478-T1
Valid prediction for GlimmerHMM_glimmerT_38822-T1
Valid prediction for snap_scaffold_16-snap.457-T1
Valid prediction for GeneMark_model.66362_t
Valid prediction for GeneMark_model.66358_t
Valid prediction for GeneMark_model.66404_t
Valid prediction for GlimmerHMM_glimmerT_38820-T1
Valid prediction for GlimmerHMM_glimmerT_38811-T1
Valid prediction for GlimmerHMM_glimmerT_38806-T1
Valid prediction for Augustus_model.g26061.t1
Valid prediction for Augustus_model.g26050.t1
Valid prediction for Augustus_model.g26060.t1
Valid prediction for GlimmerHMM_glimmerT_38837-T1
Valid prediction for snap_scaffold_16-snap.480-T1
Valid prediction for Augustus_model.g26071.t1
Valid prediction for snap_scaffold_16-snap.479-T1
Valid prediction for GeneMark_model.66389_t
Valid prediction for GeneMark_model.66350_t
Valid prediction for Augustus_model.g26047.t1
Valid prediction for GlimmerHMM_glimmerT_38835-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g26070.t1
Valid prediction for GlimmerHMM_glimmerT_38805-T1
Valid prediction for snap_scaffold_16-snap.482-T1
Valid prediction for GeneMark_model.66349_t
Valid prediction for snap_scaffold_16-snap.503-T1
Valid prediction for Augustus_model.g26042.t1
Valid prediction for snap_scaffold_16-snap.517-T1
Valid prediction for GlimmerHMM_glimmerT_38830-T1
Valid prediction for snap_scaffold_16-snap.514-T1
Valid prediction for GlimmerHMM_glimmerT_38808-T1
Valid prediction for GeneMark_model.66388_t
Valid prediction for snap_scaffold_16-snap.511-T1
Valid prediction for GeneMark_model.66408_t
Valid prediction for snap_scaffold_16-snap.515-T1
Valid prediction for Augustus_model.g26040.t1
Valid prediction for GeneMark_model.66361_t
Valid prediction for GeneMark_model.66371_t
Valid prediction for Augustus_model.g26072.t1
Valid prediction for GeneMark_model.66367_t
Valid prediction for HiQ_model.g26075.t1
Valid prediction for Augustus_model.g26068.t1
Valid prediction for GlimmerHMM_glimmerT_38832-T1
Valid prediction for GlimmerHMM_glimmerT_38825-T1
Valid prediction for snap_scaffold_16-snap.477-T1
Valid prediction for snap_scaffold_16-snap.494-T1
Valid prediction for snap_scaffold_16-snap.501-T1
Valid prediction for snap_scaffold_16-snap.456-T1
Valid prediction for GeneMark_model.66381_t
Valid prediction for snap_scaffold_16-snap.487-T1
Valid prediction for snap_scaffold_16-snap.500-T1
Valid prediction for GlimmerHMM_glimmerT_38838-T1
Valid prediction for GeneMark_model.66377_t
Valid prediction for GeneMark_model.66390_t
Valid prediction for GeneMark_model.66364_t
Valid prediction for Augustus_model.g26073.t1
Valid prediction for GeneMark_model.66418_t
Valid prediction for GlimmerHMM_glimmerT_38818-T1
Valid prediction for Augustus_model.g26067.t1
Valid prediction for GeneMark_model.66375_t
Valid prediction for GeneMark_model.66417_t
Valid prediction for GeneMark_model.66386_t
Valid prediction for GeneMark_model.66352_t
Valid prediction for snap_scaffold_16-snap.486-T1
Valid prediction for Augustus_model.g26052.t1
Valid prediction for GeneMark_model.66421_t
Valid prediction for Augustus_model.g26064.t1
Valid prediction for snap_scaffold_16-snap.459-T1
Valid prediction for GlimmerHMM_glimmerT_38823-T1
Valid prediction for snap_scaffold_16-snap.518-T1
Valid prediction for Augustus_model.g26059.t1
Valid prediction for Augustus_model.g26062.t1
Valid prediction for snap_scaffold_16-snap.467-T1
Valid prediction for GlimmerHMM_glimmerT_38843-T1
Valid prediction for snap_scaffold_16-snap.505-T1
Valid prediction for GeneMark_model.66365_t
Valid prediction for GlimmerHMM_glimmerT_38848-T1
Valid prediction for GeneMark_model.66363_t
Valid prediction for GlimmerHMM_glimmerT_38841-T1
Valid prediction for GlimmerHMM_glimmerT_38845-T1
Valid prediction for GeneMark_model.66401_t
Valid prediction for Augustus_model.g26058.t1
Valid prediction for snap_scaffold_16-snap.468-T1
Valid prediction for GlimmerHMM_glimmerT_38846-T1
Valid prediction for snap_scaffold_16-snap.491-T1
Valid prediction for GeneMark_model.66407_t
Valid prediction for GeneMark_model.66346_t
Valid prediction for GeneMark_model.66392_t
Valid prediction for snap_scaffold_16-snap.460-T1
Valid prediction for GeneMark_model.66356_t
Valid prediction for GeneMark_model.66380_t
Valid prediction for GlimmerHMM_glimmerT_38814-T1
Valid prediction for snap_scaffold_16-snap.508-T1
Valid prediction for GeneMark_model.66394_t
Valid prediction for GlimmerHMM_glimmerT_38815-T1
Valid prediction for GeneMark_model.66348_t
Valid prediction for snap_scaffold_16-snap.454-T1
Valid prediction for Augustus_model.g26048.t1
Valid prediction for GeneMark_model.66396_t
Valid prediction for GlimmerHMM_glimmerT_38833-T1
Valid prediction for snap_scaffold_16-snap.471-T1
Valid prediction for GeneMark_model.66351_t
Valid prediction for GeneMark_model.66384_t
Valid prediction for GeneMark_model.66357_t
Valid prediction for snap_scaffold_16-snap.495-T1
Valid prediction for pasa_asmbl_16148.p2
Valid prediction for GeneMark_model.66369_t
Valid prediction for CodingQuarry_transcript_19875-T1
Valid prediction for GeneMark_model.66359_t
Valid prediction for GeneMark_model.66374_t
Valid prediction for snap_scaffold_16-snap.475-T1
Valid prediction for GeneMark_model.66398_t
Valid prediction for snap_scaffold_16-snap.490-T1
Valid prediction for Augustus_model.g26049.t1
Valid prediction for snap_scaffold_16-snap.466-T1
Valid prediction for GeneMark_model.66378_t
Valid prediction for snap_scaffold_16-snap.472-T1
Valid prediction for Augustus_model.g26066.t1
Valid prediction for GeneMark_model.66403_t
Valid prediction for GeneMark_model.66354_t
Valid prediction for GeneMark_model.66414_t
Valid prediction for Augustus_model.g26039.t1
Valid prediction for GeneMark_model.66370_t
Valid prediction for GlimmerHMM_glimmerT_38807-T1
Valid prediction for GeneMark_model.66410_t
Valid prediction for GeneMark_model.66405_t
Valid prediction for snap_scaffold_16-snap.519-T1
Valid prediction for GeneMark_model.66372_t
Valid prediction for snap_scaffold_16-snap.507-T1
Valid prediction for GlimmerHMM_glimmerT_38824-T1
Valid prediction for snap_scaffold_16-snap.485-T1
Valid prediction for snap_scaffold_16-snap.512-T1
Valid prediction for GeneMark_model.66412_t
Valid prediction for snap_scaffold_16-snap.463-T1
Sorry, intron length (7) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 7493, rend_intergenic: 7490  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 4643, rend_intergenic: 3092  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 4839, rend_intergenic: 4728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 8540, rend_intergenic: 4855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19040, rend_intergenic: 11316  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24556, rend_intergenic: 19110  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27142, rend_intergenic: 25502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29063, rend_intergenic: 28359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44013, rend_intergenic: 33130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47419, rend_intergenic: 44301  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58783, rend_intergenic: 48378  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70208, rend_intergenic: 64499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77275, rend_intergenic: 72732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98487, rend_intergenic: 94255  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106150, rend_intergenic: 103222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118805, rend_intergenic: 111670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177913, rend_intergenic: 176536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181886, rend_intergenic: 178273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184878, rend_intergenic: 182980  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191805, rend_intergenic: 187292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196020, rend_intergenic: 193378  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198944, rend_intergenic: 197811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205074, rend_intergenic: 200262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219637, rend_intergenic: 214151  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 222128
-exon list size: 1184


building trellis

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34.0    
34.1    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.7    
34.7    
34.8    
34.9    
35.0    
35.1    
35.2    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.7    
99.8    
99.9    
-found 59 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 7493, rend_intergenic: 7490  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 4643, rend_intergenic: 3092  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 4839, rend_intergenic: 4728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 8540, rend_intergenic: 4855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19040, rend_intergenic: 11316  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24556, rend_intergenic: 19110  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27142, rend_intergenic: 25502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29063, rend_intergenic: 28359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44013, rend_intergenic: 33130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47419, rend_intergenic: 44301  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58783, rend_intergenic: 48378  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70208, rend_intergenic: 64499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77275, rend_intergenic: 72732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98487, rend_intergenic: 94255  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106150, rend_intergenic: 103222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118805, rend_intergenic: 111670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177913, rend_intergenic: 176536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181886, rend_intergenic: 178273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184878, rend_intergenic: 182980  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191805, rend_intergenic: 187292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196020, rend_intergenic: 193378  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198944, rend_intergenic: 197811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205074, rend_intergenic: 200262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219637, rend_intergenic: 214151  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support